RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	LY6G6E	A0A0G2JKS1	128 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663		A0A0J9YYE9	177 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	IQANK1	A0A1B0GTG1	560 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	ZCWPW2	A0A1B0GU75	182 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	TPP1	O14773	563 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	RGS16	O15492	202 aa	Predicted RBP	11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	AQP9	O43315	295 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	BANF1	O75531	89 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	TRBC1	P01850	177 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	INHBA	P08476	426 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	C6	P13671	934 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	TPH1	P17752	444 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	LPO	P22079	712 aa	Predicted RBP	11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	LIG3	P49916	1009 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	CLDN6	P56747	220 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	DAB2	P98082	770 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	INSM1	Q01101	510 aa	Predicted RBP	11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	RALGDS	Q12967	914 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	TARDBP	Q13148	414 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	IHH	Q14623	411 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	POU6F1	Q14863	301 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	LRRC14	Q15048	493 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	IRF4	Q15306	451 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	QPCT	Q16769	361 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	WSCD2	Q2TBF2	565 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	HES3	Q5TGS1	186 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	MACC1	Q6ZN28	852 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	KIAA0408	Q6ZU52	694 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	USP45	Q70EL2	814 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	MARK2	Q7KZI7	788 aa	Known RBP	11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	GALNT7	Q86SF2	657 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	SLC25A41	Q8N5S1	370 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	PAF1	Q8N7H5	531 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	LPCAT1	Q8NF37	534 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	PIH1D2	Q8WWB5	315 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	SLC44A1	Q8WWI5	657 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	MTBP	Q96DY7	904 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	SCRN2	Q96FV2	425 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	APOLD1	Q96LR9	279 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	FAM167B	Q9BTA0	163 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	DHRS4	Q9BTZ2	278 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	CHRAC1	Q9NRG0	131 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	RAD18	Q9NS91	495 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	OGFR	Q9NZT2	677 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	ZFAT	Q9P243	1243 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	TXNDC16	Q9P2K2	825 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	PNMA8B	Q9ULN7	279 aa	Predicted RBP	11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	COQ6	Q9Y2Z9	468 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	ACTL7B	Q9Y614	415 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663		U3KQA8	63 aa		11.97	□□□□□ -0.49
CTNS-205	ENST00000467663	ZNF106	Q9H2Y7	1883 aa	Known RBP	11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	CAPN8	A6NHC0	703 aa		11.96	□□□□□ -0.49
CTNS-205	ENST00000467663		H7C0S8	307 aa		11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	PFDN6	O15212	129 aa		11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	LDB2	O43679	373 aa		11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	FAM155B	O75949	473 aa		11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	KRT38	O76015	456 aa		11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	SYF2	O95926	243 aa	Known RBP	11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	SHBG	P04278	402 aa		11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	PRKCG	P05129	697 aa		11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	GP1BA	P07359	652 aa		11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	CYP2A6	P11509	494 aa	Predicted RBP	11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	ZNF30	P17039	623 aa		11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	HMGCL	P35914	325 aa		11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	CHRNA4	P43681	627 aa		11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	POLD2	P49005	469 aa		11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	DUSP3	P51452	185 aa	Predicted RBP	11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	CSE1L	P55060	971 aa	Known RBP	11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	CYP4F3	Q08477	520 aa		11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	KBTBD12	Q3ZCT8	623 aa		11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	TNFAIP8L3	Q5GJ75	292 aa		11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	ZCCHC8	Q6NZY4	707 aa	Known RBP	11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	LIPI	Q6XZB0	460 aa		11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	DPPA4	Q7L190	304 aa		11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	GLT6D1	Q7Z4J2	308 aa		11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	CNTN4	Q8IWV2	1026 aa		11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	PHACTR4	Q8IZ21	702 aa		11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	RBFA	Q8N0V3	343 aa		11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	KRT222	Q8N1A0	295 aa		11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	CBARP	Q8N350	705 aa	Predicted RBP	11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	ARFGAP2	Q8N6H7	521 aa		11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	DCBLD1	Q8N8Z6	715 aa		11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	BLOC1S5	Q8TDH9	187 aa		11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	LMX1A	Q8TE12	382 aa		11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	PDCD6IP	Q8WUM4	868 aa	Known RBP	11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	ATP6V1G3	Q96LB4	118 aa		11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	CPNE1	Q99829	537 aa		11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	CDH19	Q9H159	772 aa		11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	TCEAL2	Q9H3H9	227 aa	Predicted RBP	11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	EVA1B	Q9NVM1	165 aa		11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	NLE1	Q9NVX2	485 aa	Predicted RBP	11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	EURL	Q9NYK6	297 aa		11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	NCKIPSD	Q9NZQ3	722 aa		11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	SPAST	Q9UBP0	616 aa		11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	APOBEC3B	Q9UH17	382 aa	Known RBP	11.96	□□□□□ -0.49
CTNS-205	ENST00000467663	TLDC2	A0PJX2	215 aa		11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	TTC24	A2A3L6	582 aa	Predicted RBP	11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	RGSL1	A5PLK6	1076 aa		11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	POC1B-GALNT4	F8VUJ3	575 aa		11.95	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms