RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 DCDC1P59894 354 aa13.9□□□□□ -0.18
CCHCR1-211ENST00000467553 BIRC2Q13490 618 aa13.9□□□□□ -0.18
CCHCR1-211ENST00000467553 LRP8Q14114 963 aa13.9□□□□□ -0.18
CCHCR1-211ENST00000467553 MAP9Q49MG5 647 aa13.9□□□□□ -0.18
CCHCR1-211ENST00000467553 PYCR3Q53H96 274 aa13.9□□□□□ -0.18
CCHCR1-211ENST00000467553 ZNF569Q5MCW4 686 aa13.9□□□□□ -0.18
CCHCR1-211ENST00000467553 SLC30A9Q6PML9 568 aa13.9□□□□□ -0.18
CCHCR1-211ENST00000467553 CHST15Q7LFX5 561 aaPredicted RBP13.9□□□□□ -0.18
CCHCR1-211ENST00000467553 GALNT13Q8IUC8 556 aa13.9□□□□□ -0.18
CCHCR1-211ENST00000467553 SFTPA2Q8IWL1 248 aa13.9□□□□□ -0.18
CCHCR1-211ENST00000467553 SGF29Q96ES7 293 aa13.9□□□□□ -0.18
CCHCR1-211ENST00000467553 OR2M4Q96R27 311 aa13.9□□□□□ -0.18
CCHCR1-211ENST00000467553 FRMD8P1Q9BZ68 369 aaPredicted RBP13.9□□□□□ -0.18
CCHCR1-211ENST00000467553 IL17CQ9P0M4 197 aa13.9□□□□□ -0.18
CCHCR1-211ENST00000467553 PISDQ9UG56 409 aa13.9□□□□□ -0.18
CCHCR1-211ENST00000467553 PKP3Q9Y446 797 aa13.9□□□□□ -0.18
CCHCR1-211ENST00000467553 PIEZO2Q9H5I5 2752 aa13.9□□□□□ -0.18
CCHCR1-211ENST00000467553 PMS2P1A4D2B8 440 aa13.89□□□□□ -0.19
CCHCR1-211ENST00000467553 C2orf81A6NN90 581 aa13.89□□□□□ -0.19
CCHCR1-211ENST00000467553 CASC3O15234 703 aaKnown RBP13.89□□□□□ -0.19
CCHCR1-211ENST00000467553 STX7O15400 261 aaKnown RBP13.89□□□□□ -0.19
CCHCR1-211ENST00000467553 ZSCAN12O43309 604 aa13.89□□□□□ -0.19
CCHCR1-211ENST00000467553 B4GAT1O43505 415 aa13.89□□□□□ -0.19
CCHCR1-211ENST00000467553 DNAJC6O75061 913 aa13.89□□□□□ -0.19
CCHCR1-211ENST00000467553 IFNB1P01574 187 aa13.89□□□□□ -0.19
CCHCR1-211ENST00000467553 FGGP02679 453 aa13.89□□□□□ -0.19
CCHCR1-211ENST00000467553 ACTR1BP42025 376 aa13.89□□□□□ -0.19
CCHCR1-211ENST00000467553 ACTR1AP61163 376 aa13.89□□□□□ -0.19
CCHCR1-211ENST00000467553 GPLD1P80108 840 aa13.89□□□□□ -0.19
CCHCR1-211ENST00000467553 PTPRCAPQ14761 206 aa13.89□□□□□ -0.19
CCHCR1-211ENST00000467553 MANEAQ5SRI9 462 aa13.89□□□□□ -0.19
CCHCR1-211ENST00000467553 PHF19Q5T6S3 580 aa13.89□□□□□ -0.19
CCHCR1-211ENST00000467553 USP53Q70EK8 1073 aa13.89□□□□□ -0.19
CCHCR1-211ENST00000467553 REXO1L1PQ8IX06 675 aa13.89□□□□□ -0.19
CCHCR1-211ENST00000467553 GDAP1Q8TB36 358 aa13.89□□□□□ -0.19
CCHCR1-211ENST00000467553 GLYATL1Q969I3 302 aa13.89□□□□□ -0.19
CCHCR1-211ENST00000467553 PLEKHG4BQ96PX9 1271 aa13.89□□□□□ -0.19
CCHCR1-211ENST00000467553 OR2AG1Q9H205 316 aa13.89□□□□□ -0.19
CCHCR1-211ENST00000467553 KCNF1Q9H3M0 494 aa13.89□□□□□ -0.19
CCHCR1-211ENST00000467553 TRIM39Q9HCM9 518 aa13.89□□□□□ -0.19
CCHCR1-211ENST00000467553 ASH1LQ9NR48 2969 aaKnown RBP13.89□□□□□ -0.19
CCHCR1-211ENST00000467553 TRMT1Q9NXH9 659 aaKnown RBP13.89□□□□□ -0.19
CCHCR1-211ENST00000467553 VPS18Q9P253 973 aa13.89□□□□□ -0.19
CCHCR1-211ENST00000467553 ATXN10Q9UBB4 475 aa13.89□□□□□ -0.19
CCHCR1-211ENST00000467553 ST14Q9Y5Y6 855 aa13.89□□□□□ -0.19
CCHCR1-211ENST00000467553 ARL5AQ9Y689 179 aa13.89□□□□□ -0.19
CCHCR1-211ENST00000467553 BSNQ9UPA5 3926 aa13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 TRBV23OR9-2A0A075B6M9 112 aa13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 PSMD3O43242 534 aa13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 UGT1A9O60656 530 aa13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 MTX2O75431 263 aa13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 ECEL1O95672 775 aa13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 ETS1P14921 441 aa13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 ZNF8P17098 575 aaPredicted RBP13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 TPH1P17752 444 aa13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 UGT1A6P19224 532 aa13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 LPOP22079 712 aaPredicted RBP13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 UGT1A1P22309 533 aa13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 UGT1A4P22310 534 aa13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 UGT1A3P35503 534 aa13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 SPAM1P38567 509 aa13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 LIMK2P53671 638 aa13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 TAF1AQ15573 450 aaPredicted RBP13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 OASLQ15646 514 aaKnown RBP13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 CHRNA6Q15825 494 aa13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 CCNG2Q16589 344 aa13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 LONRF2Q1L5Z9 754 aa13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 ATP13A5Q4VNC0 1218 aa13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 ZDHHC20Q5W0Z9 365 aa13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 PDPK2PQ6A1A2 396 aa13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 DENND5AQ6IQ26 1287 aa13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 FAM151BQ6UXP7 276 aa13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 ADGRG6Q86SQ4 1221 aa13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 PRUNE1Q86TP1 453 aa13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 DTX1Q86Y01 620 aa13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 OR4D9Q8NGE8 314 aa13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 MAIP1Q8WWC4 291 aa13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 USP7Q93009 1102 aa13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 RMI1Q9H9A7 625 aa13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 UGT1A7Q9HAW7 530 aa13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 UGT1A10Q9HAW8 530 aa13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 UGT1A8Q9HAW9 530 aa13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 IL26Q9NPH9 171 aa13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 NFKBIL1Q9UBC1 381 aaPredicted RBP13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 KCTD3Q9Y597 815 aa13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 PCDHGA3Q9Y5H0 932 aa13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 PCYT1BQ9Y5K3 369 aaPredicted RBP13.88□□□□□ -0.19
CCHCR1-211ENST00000467553 ZFC3H1O60293 1989 aaKnown RBP13.87□□□□□ -0.19
CCHCR1-211ENST00000467553 FLNBO75369 2602 aaKnown RBP13.87□□□□□ -0.19
CCHCR1-211ENST00000467553 SETXQ7Z333 2677 aaKnown RBP13.87□□□□□ -0.19
CCHCR1-211ENST00000467553 GLYATL1P3A0A0U1RQE8 302 aa13.87□□□□□ -0.19
CCHCR1-211ENST00000467553 STMND1H3BQB6 276 aa13.87□□□□□ -0.19
CCHCR1-211ENST00000467553 EFSO43281 561 aa13.87□□□□□ -0.19
CCHCR1-211ENST00000467553 GRID2O43424 1007 aa13.87□□□□□ -0.19
CCHCR1-211ENST00000467553 NUAK1O60285 661 aa13.87□□□□□ -0.19
CCHCR1-211ENST00000467553 HGFP14210 728 aa13.87□□□□□ -0.19
CCHCR1-211ENST00000467553 CD1CP29017 333 aa13.87□□□□□ -0.19
CCHCR1-211ENST00000467553 ALDH4A1P30038 563 aa13.87□□□□□ -0.19
CCHCR1-211ENST00000467553 FASLGP48023 281 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms