RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 GFERP55789 205 aa18.87■□□□□ 0.61
COL9A3-206ENST00000466532 KCNC4Q03721 635 aa18.87■□□□□ 0.61
COL9A3-206ENST00000466532 PRKD1Q15139 912 aaPredicted RBP18.87■□□□□ 0.61
COL9A3-206ENST00000466532 TMEM26Q6ZUK4 368 aa18.87■□□□□ 0.61
COL9A3-206ENST00000466532 BZW1Q7L1Q6 419 aaKnown RBP18.87■□□□□ 0.61
COL9A3-206ENST00000466532 KIAA1143Q96AT1 154 aaPredicted RBP18.87■□□□□ 0.61
COL9A3-206ENST00000466532 TEKT5Q96M29 485 aa18.87■□□□□ 0.61
COL9A3-206ENST00000466532 TIMM29Q9BSF4 260 aa18.87■□□□□ 0.61
COL9A3-206ENST00000466532 TRIM4Q9C037 500 aa18.87■□□□□ 0.61
COL9A3-206ENST00000466532 GPN2Q9H9Y4 310 aaPredicted RBP18.87■□□□□ 0.61
COL9A3-206ENST00000466532 BPIFA1Q9NP55 256 aa18.87■□□□□ 0.61
COL9A3-206ENST00000466532 ZNF624Q9P2J8 865 aaPredicted RBP18.87■□□□□ 0.61
COL9A3-206ENST00000466532 SAE1Q9UBE0 346 aaPredicted RBP18.87■□□□□ 0.61
COL9A3-206ENST00000466532 LOC101059948A0A1B0GTJ6 334 aa18.86■□□□□ 0.61
COL9A3-206ENST00000466532 POLR1CO15160 346 aaPredicted RBP18.86■□□□□ 0.61
COL9A3-206ENST00000466532 STK17BO94768 372 aa18.86■□□□□ 0.61
COL9A3-206ENST00000466532 CDK14O94921 469 aa18.86■□□□□ 0.61
COL9A3-206ENST00000466532 ANKRD34CP0C6C1 535 aa18.86■□□□□ 0.61
COL9A3-206ENST00000466532 TYRP1P17643 537 aa18.86■□□□□ 0.61
COL9A3-206ENST00000466532 CDKN2BP42772 138 aa18.86■□□□□ 0.61
COL9A3-206ENST00000466532 NR2C2P49116 596 aa18.86■□□□□ 0.61
COL9A3-206ENST00000466532 TFDP2Q14188 446 aa18.86■□□□□ 0.61
COL9A3-206ENST00000466532 LLGL1Q15334 1064 aa18.86■□□□□ 0.61
COL9A3-206ENST00000466532 KHDC1Q4VXA5 237 aaKnown RBP18.86■□□□□ 0.61
COL9A3-206ENST00000466532 KAZNQ674X7 775 aa18.86■□□□□ 0.61
COL9A3-206ENST00000466532 ATG14Q6ZNE5 492 aa18.86■□□□□ 0.61
COL9A3-206ENST00000466532 TIPARPQ7Z3E1 657 aaKnown RBP18.86■□□□□ 0.61
COL9A3-206ENST00000466532 ZNF547Q8IVP9 402 aa18.86■□□□□ 0.61
COL9A3-206ENST00000466532 TFB1MQ8WVM0 346 aaKnown RBP18.86■□□□□ 0.61
COL9A3-206ENST00000466532 SLC45A3Q96JT2 553 aa18.86■□□□□ 0.61
COL9A3-206ENST00000466532 VPS35Q96QK1 796 aa18.86■□□□□ 0.61
COL9A3-206ENST00000466532 SLC25A18Q9H1K4 315 aa18.86■□□□□ 0.61
COL9A3-206ENST00000466532 ADNPQ9H2P0 1102 aa18.86■□□□□ 0.61
COL9A3-206ENST00000466532 OGFRQ9NZT2 677 aa18.86■□□□□ 0.61
COL9A3-206ENST00000466532 INTUQ9ULD6 942 aa18.86■□□□□ 0.61
COL9A3-206ENST00000466532 TMEM184BQ9Y519 407 aaPredicted RBP18.86■□□□□ 0.61
COL9A3-206ENST00000466532 CST8O60676 142 aa18.85■□□□□ 0.61
COL9A3-206ENST00000466532 UBXN7O94888 489 aa18.85■□□□□ 0.61
COL9A3-206ENST00000466532 C9P02748 559 aa18.85■□□□□ 0.61
COL9A3-206ENST00000466532 PECAM1P16284 738 aaPredicted RBP18.85■□□□□ 0.61
COL9A3-206ENST00000466532 AMD1P17707 334 aa18.85■□□□□ 0.61
COL9A3-206ENST00000466532 NFKB1P19838 968 aa18.85■□□□□ 0.61
COL9A3-206ENST00000466532 RPL10P27635 214 aaKnown RBP18.85■□□□□ 0.61
COL9A3-206ENST00000466532 CD68P34810 354 aaPredicted RBP18.85■□□□□ 0.61
COL9A3-206ENST00000466532 POLE2P56282 527 aa18.85■□□□□ 0.61
COL9A3-206ENST00000466532 WASHC5Q12768 1159 aa18.85■□□□□ 0.61
COL9A3-206ENST00000466532 TCEAL1Q15170 157 aa18.85■□□□□ 0.61
COL9A3-206ENST00000466532 ATP13A5Q4VNC0 1218 aa18.85■□□□□ 0.61
COL9A3-206ENST00000466532 UNC5BQ8IZJ1 945 aa18.85■□□□□ 0.61
COL9A3-206ENST00000466532 GDAP1Q8TB36 358 aa18.85■□□□□ 0.61
COL9A3-206ENST00000466532 C9orf72Q96LT7 481 aa18.85■□□□□ 0.61
COL9A3-206ENST00000466532 CATSPER2Q96P56 530 aa18.85■□□□□ 0.61
COL9A3-206ENST00000466532 TGM7Q96PF1 710 aa18.85■□□□□ 0.61
COL9A3-206ENST00000466532 EFHD1Q9BUP0 239 aa18.85■□□□□ 0.61
COL9A3-206ENST00000466532 POT1Q9NUX5 634 aa18.85■□□□□ 0.61
COL9A3-206ENST00000466532 SIDT1Q9NXL6 827 aaKnown RBP18.85■□□□□ 0.61
COL9A3-206ENST00000466532 FAM153AQ9UHL3 310 aa18.85■□□□□ 0.61
COL9A3-206ENST00000466532 TMPRSS11EQ9UL52 423 aa18.85■□□□□ 0.61
COL9A3-206ENST00000466532 SLC30A1Q9Y6M5 507 aa18.85■□□□□ 0.61
COL9A3-206ENST00000466532 LOC285095A0A1B0GVY8 99 aa18.84■□□□□ 0.61
COL9A3-206ENST00000466532 PRR19A6NJB7 356 aa18.84■□□□□ 0.61
COL9A3-206ENST00000466532 NKX2-8O15522 239 aa18.84■□□□□ 0.61
COL9A3-206ENST00000466532 SUV39H1O43463 412 aa18.84■□□□□ 0.61
COL9A3-206ENST00000466532 PSTPIP1O43586 416 aa18.84■□□□□ 0.61
COL9A3-206ENST00000466532 BRAFP15056 766 aa18.84■□□□□ 0.61
COL9A3-206ENST00000466532 VCLP18206 1134 aa18.84■□□□□ 0.61
COL9A3-206ENST00000466532 IDSP22304 550 aa18.84■□□□□ 0.61
COL9A3-206ENST00000466532 HMGCLP35914 325 aa18.84■□□□□ 0.61
COL9A3-206ENST00000466532 CCR10P46092 362 aa18.84■□□□□ 0.61
COL9A3-206ENST00000466532 DRG2P55039 364 aaKnown RBP18.84■□□□□ 0.61
COL9A3-206ENST00000466532 WNT3AP56704 352 aa18.84■□□□□ 0.61
COL9A3-206ENST00000466532 FOXM1Q08050 763 aa18.84■□□□□ 0.61
COL9A3-206ENST00000466532 ABHD18Q0P651 414 aa18.84■□□□□ 0.61
COL9A3-206ENST00000466532 TMEM115Q12893 351 aaPredicted RBP18.84■□□□□ 0.61
COL9A3-206ENST00000466532 GTF2H3Q13889 308 aa18.84■□□□□ 0.61
COL9A3-206ENST00000466532 NOMO1Q15155 1222 aa18.84■□□□□ 0.61
COL9A3-206ENST00000466532 TAZQ16635 292 aa18.84■□□□□ 0.61
COL9A3-206ENST00000466532 KDELC1Q6UW63 502 aa18.84■□□□□ 0.61
COL9A3-206ENST00000466532 ABRAXAS1Q6UWZ7 409 aa18.84■□□□□ 0.61
COL9A3-206ENST00000466532 SPOCD1Q6ZMY3 1216 aa18.84■□□□□ 0.61
COL9A3-206ENST00000466532 ZC3H18Q86VM9 953 aaKnown RBP18.84■□□□□ 0.61
COL9A3-206ENST00000466532 TRAPPC5Q8IUR0 188 aa18.84■□□□□ 0.61
COL9A3-206ENST00000466532 CNGA4Q8IV77 575 aa18.84■□□□□ 0.61
COL9A3-206ENST00000466532 TRIT1Q9H3H1 467 aaKnown RBP18.84■□□□□ 0.61
COL9A3-206ENST00000466532 KLHL8Q9P2G9 620 aaPredicted RBP18.84■□□□□ 0.61
COL9A3-206ENST00000466532 TRIM10Q9UDY6 481 aa18.84■□□□□ 0.61
COL9A3-206ENST00000466532 SPTA1P02549 2419 aa18.83■□□□□ 0.61
COL9A3-206ENST00000466532 OR52A4PA6NMU1 304 aa18.83■□□□□ 0.6
COL9A3-206ENST00000466532 F5H423 210 aaPredicted RBP18.83■□□□□ 0.6
COL9A3-206ENST00000466532 TERTO14746 1132 aaKnown RBP18.83■□□□□ 0.6
COL9A3-206ENST00000466532 MTSS1O43312 755 aa18.83■□□□□ 0.6
COL9A3-206ENST00000466532 DLGAP3O95886 979 aa18.83■□□□□ 0.6
COL9A3-206ENST00000466532 PRKAR1AP10644 381 aa18.83■□□□□ 0.6
COL9A3-206ENST00000466532 TNNT3P45378 269 aaPredicted RBP18.83■□□□□ 0.6
COL9A3-206ENST00000466532 LEPRP48357 1165 aaKnown RBP18.83■□□□□ 0.6
COL9A3-206ENST00000466532 SEPHS1P49903 392 aa18.83■□□□□ 0.6
COL9A3-206ENST00000466532 CSRP3P50461 194 aa18.83■□□□□ 0.6
COL9A3-206ENST00000466532 KCNAB2Q13303 367 aa18.83■□□□□ 0.6
COL9A3-206ENST00000466532 SKOR2Q2VWA4 1001 aaPredicted RBP18.83■□□□□ 0.6
COL9A3-206ENST00000466532 SIRPB2Q5JXA9 342 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms