RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 COL4A2P08572 1712 aa18.45■□□□□ 0.54
CAPN3-209ENST00000466222 USP34Q70CQ2 3546 aa18.45■□□□□ 0.54
CAPN3-209ENST00000466222 OR1I1O60431 355 aa18.45■□□□□ 0.54
CAPN3-209ENST00000466222 SRP72O76094 671 aaKnown RBP18.45■□□□□ 0.54
CAPN3-209ENST00000466222 PRAMEF1O95521 474 aa18.45■□□□□ 0.54
CAPN3-209ENST00000466222 STC1P52823 247 aa18.45■□□□□ 0.54
CAPN3-209ENST00000466222 ALDH18A1P54886 795 aaKnown RBP18.45■□□□□ 0.54
CAPN3-209ENST00000466222 RPS14P62263 151 aaKnown RBP18.45■□□□□ 0.54
CAPN3-209ENST00000466222 RCN2Q14257 317 aa18.45■□□□□ 0.54
CAPN3-209ENST00000466222 CHRNA6Q15825 494 aa18.45■□□□□ 0.54
CAPN3-209ENST00000466222 AFTPHQ6ULP2 937 aa18.45■□□□□ 0.54
CAPN3-209ENST00000466222 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.45■□□□□ 0.54
CAPN3-209ENST00000466222 KIRREL3Q8IZU9 778 aa18.45■□□□□ 0.54
CAPN3-209ENST00000466222 HCAR2Q8TDS4 363 aa18.45■□□□□ 0.54
CAPN3-209ENST00000466222 CD93Q9NPY3 652 aa18.45■□□□□ 0.54
CAPN3-209ENST00000466222 DYRK4Q9NR20 520 aa18.45■□□□□ 0.54
CAPN3-209ENST00000466222 THEGQ9P2T0 379 aa18.45■□□□□ 0.54
CAPN3-209ENST00000466222 A0A1W2PP55 124 aa18.44■□□□□ 0.54
CAPN3-209ENST00000466222 C1QTNF3-AMACRE9PGA6 284 aa18.44■□□□□ 0.54
CAPN3-209ENST00000466222 H7C0S8 307 aa18.44■□□□□ 0.54
CAPN3-209ENST00000466222 AREL1O15033 823 aa18.44■□□□□ 0.54
CAPN3-209ENST00000466222 NPC1O15118 1278 aa18.44■□□□□ 0.54
CAPN3-209ENST00000466222 MAP3K7O43318 606 aa18.44■□□□□ 0.54
CAPN3-209ENST00000466222 FKBP6O75344 327 aa18.44■□□□□ 0.54
CAPN3-209ENST00000466222 SPRP35270 261 aaPredicted RBP18.44■□□□□ 0.54
CAPN3-209ENST00000466222 CPA2P48052 419 aa18.44■□□□□ 0.54
CAPN3-209ENST00000466222 LEPRP48357 1165 aaKnown RBP18.44■□□□□ 0.54
CAPN3-209ENST00000466222 SPINT3P49223 89 aa18.44■□□□□ 0.54
CAPN3-209ENST00000466222 SERPINB8P50452 374 aa18.44■□□□□ 0.54
CAPN3-209ENST00000466222 ACTR3P61158 418 aa18.44■□□□□ 0.54
CAPN3-209ENST00000466222 TUBB3Q13509 450 aa18.44■□□□□ 0.54
CAPN3-209ENST00000466222 ZNF460Q14592 562 aa18.44■□□□□ 0.54
CAPN3-209ENST00000466222 PIP5KL1Q5T9C9 394 aa18.44■□□□□ 0.54
CAPN3-209ENST00000466222 LIPIQ6XZB0 460 aa18.44■□□□□ 0.54
CAPN3-209ENST00000466222 ZNF852Q6ZMS4 543 aa18.44■□□□□ 0.54
CAPN3-209ENST00000466222 DPPA4Q7L190 304 aa18.44■□□□□ 0.54
CAPN3-209ENST00000466222 TAS2R42Q7RTR8 314 aa18.44■□□□□ 0.54
CAPN3-209ENST00000466222 ULK2Q8IYT8 1036 aa18.44■□□□□ 0.54
CAPN3-209ENST00000466222 ZNF687Q8N1G0 1237 aa18.44■□□□□ 0.54
CAPN3-209ENST00000466222 CALML6Q8TD86 181 aa18.44■□□□□ 0.54
CAPN3-209ENST00000466222 SREK1Q8WXA9 508 aaKnown RBP18.44■□□□□ 0.54
CAPN3-209ENST00000466222 PPP1R16AQ96I34 528 aa18.44■□□□□ 0.54
CAPN3-209ENST00000466222 ZNF395Q9H8N7 513 aaPredicted RBP18.44■□□□□ 0.54
CAPN3-209ENST00000466222 CD320Q9NPF0 282 aa18.44■□□□□ 0.54
CAPN3-209ENST00000466222 SLC39A10Q9ULF5 831 aa18.44■□□□□ 0.54
CAPN3-209ENST00000466222 GLYATL1P3A0A0U1RQE8 302 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 PRR5-ARHGAP8B1AHC4 643 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 MMP20O60882 483 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 H2AFYO75367 372 aaKnown RBP18.43■□□□□ 0.54
CAPN3-209ENST00000466222 MPOP05164 745 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 CHRNB1P11230 501 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 PMLP29590 882 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 TYK2P29597 1187 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 CD151P48509 253 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 TAS2R38P59533 333 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 AP2B1P63010 937 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 MRPS21P82921 87 aaKnown RBP18.43■□□□□ 0.54
CAPN3-209ENST00000466222 ARHGAP8P85298 464 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 STARD3Q14849 445 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 MRNIPQ6NTE8 343 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 ERAP2Q6P179 960 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 AAGABQ6PD74 315 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 ZCCHC23Q6ZST2 131 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 MYLK4Q86YV6 388 aaPredicted RBP18.43■□□□□ 0.54
CAPN3-209ENST00000466222 SLC41A1Q8IVJ1 513 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 CBARPQ8N350 705 aaPredicted RBP18.43■□□□□ 0.54
CAPN3-209ENST00000466222 HDDC3Q8N4P3 179 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 GPR150Q8NGU9 434 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 OR2T3Q8NH03 318 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 SCG3Q8WXD2 468 aaKnown RBP18.43■□□□□ 0.54
CAPN3-209ENST00000466222 FAM136AQ96C01 138 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 FOXQ1Q9C009 403 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 RHOJQ9H4E5 214 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 ASB8Q9H765 288 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 COPG2Q9UBF2 871 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 MID2Q9UJV3 735 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 MIA3Q5JRA6 1907 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 RNASEH1O60930 286 aaKnown RBP18.43■□□□□ 0.54
CAPN3-209ENST00000466222 RNASEH2AO75792 299 aaKnown RBP18.43■□□□□ 0.54
CAPN3-209ENST00000466222 CYP2A6P11509 494 aaPredicted RBP18.43■□□□□ 0.54
CAPN3-209ENST00000466222 SPAM1P38567 509 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 CSE1LP55060 971 aaKnown RBP18.43■□□□□ 0.54
CAPN3-209ENST00000466222 SESN3P58005 492 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 MXRA7P84157 204 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 AGBL4Q5VU57 503 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 C16orf46Q6P387 395 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 ZNF549Q6P9A3 640 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 SIX5Q8N196 739 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 PELI3Q8N2H9 469 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 EBF4Q9BQW3 602 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 HDAC8Q9BY41 377 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 VCXQ9H320 206 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 SLC30A1Q9Y6M5 507 aa18.43■□□□□ 0.54
CAPN3-209ENST00000466222 C19orf67A6NJJ6 358 aa18.42■□□□□ 0.54
CAPN3-209ENST00000466222 NEMP1O14524 444 aa18.42■□□□□ 0.54
CAPN3-209ENST00000466222 ELFN1P0C7U0 828 aa18.42■□□□□ 0.54
CAPN3-209ENST00000466222 PRDX6P30041 224 aa18.42■□□□□ 0.54
CAPN3-209ENST00000466222 ABCE1P61221 599 aaKnown RBP18.42■□□□□ 0.54
CAPN3-209ENST00000466222 NFATC2Q13469 925 aa18.42■□□□□ 0.54
CAPN3-209ENST00000466222 GAS6Q14393 721 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms