RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 EME2A4GXA9 379 aaPredicted RBP20.04■□□□□ 0.8
SKA3-205ENST00000465471 A6NCN8 305 aa20.04■□□□□ 0.8
SKA3-205ENST00000465471 OR51F1A6NGY5 319 aa20.04■□□□□ 0.8
SKA3-205ENST00000465471 GOLGA8MH3BSY2 632 aa20.04■□□□□ 0.8
SKA3-205ENST00000465471 TP73O15350 636 aa20.04■□□□□ 0.8
SKA3-205ENST00000465471 SGTAO43765 313 aa20.04■□□□□ 0.8
SKA3-205ENST00000465471 RFPL3O75679 317 aa20.04■□□□□ 0.8
SKA3-205ENST00000465471 ACP5P13686 325 aa20.04■□□□□ 0.8
SKA3-205ENST00000465471 ACTR1BP42025 376 aa20.04■□□□□ 0.8
SKA3-205ENST00000465471 DUSP3P51452 185 aaPredicted RBP20.04■□□□□ 0.8
SKA3-205ENST00000465471 ACTR1AP61163 376 aa20.04■□□□□ 0.8
SKA3-205ENST00000465471 DAB2P98082 770 aa20.04■□□□□ 0.8
SKA3-205ENST00000465471 C2orf54Q08AI8 447 aa20.04■□□□□ 0.8
SKA3-205ENST00000465471 GTF2H3Q13889 308 aa20.04■□□□□ 0.8
SKA3-205ENST00000465471 NR0B2Q15466 257 aa20.04■□□□□ 0.8
SKA3-205ENST00000465471 ZRANB3Q5FWF4 1079 aa20.04■□□□□ 0.8
SKA3-205ENST00000465471 IZUMO3Q5VZ72 239 aa20.04■□□□□ 0.8
SKA3-205ENST00000465471 AFTPHQ6ULP2 937 aa20.04■□□□□ 0.8
SKA3-205ENST00000465471 CRTC3Q6UUV7 619 aa20.04■□□□□ 0.8
SKA3-205ENST00000465471 CHST15Q7LFX5 561 aaPredicted RBP20.04■□□□□ 0.8
SKA3-205ENST00000465471 SFTPA2Q8IWL1 248 aa20.04■□□□□ 0.8
SKA3-205ENST00000465471 AGGF1Q8N302 714 aaeCLIP20.04■□□□□ 0.8
SKA3-205ENST00000465471 MPP5Q8N3R9 675 aa20.04■□□□□ 0.8
SKA3-205ENST00000465471 ADAMTS14Q8WXS8 1223 aa20.04■□□□□ 0.8
SKA3-205ENST00000465471 GLMNQ92990 594 aa20.04■□□□□ 0.8
SKA3-205ENST00000465471 ZDHHC3Q9NYG2 299 aa20.04■□□□□ 0.8
SKA3-205ENST00000465471 SLC23A2Q9UGH3 650 aa20.04■□□□□ 0.8
SKA3-205ENST00000465471 WASF3Q9UPY6 502 aa20.04■□□□□ 0.8
SKA3-205ENST00000465471 FAM187AA6NFU0 413 aa20.03■□□□□ 0.8
SKA3-205ENST00000465471 SEC31AO94979 1220 aaKnown RBP20.03■□□□□ 0.8
SKA3-205ENST00000465471 TRIM16O95361 564 aa20.03■□□□□ 0.8
SKA3-205ENST00000465471 GOT2P00505 430 aaKnown RBP20.03■□□□□ 0.8
SKA3-205ENST00000465471 GP1BAP07359 652 aa20.03■□□□□ 0.8
SKA3-205ENST00000465471 ZNF7P17097 686 aaPredicted RBP20.03■□□□□ 0.8
SKA3-205ENST00000465471 MSH3P20585 1137 aa20.03■□□□□ 0.8
SKA3-205ENST00000465471 NMBRP28336 390 aa20.03■□□□□ 0.8
SKA3-205ENST00000465471 PMLP29590 882 aa20.03■□□□□ 0.8
SKA3-205ENST00000465471 AKT1P31749 480 aa20.03■□□□□ 0.8
SKA3-205ENST00000465471 RPIAP49247 311 aa20.03■□□□□ 0.8
SKA3-205ENST00000465471 CKAP4Q07065 602 aaKnown RBP20.03■□□□□ 0.8
SKA3-205ENST00000465471 HLTFQ14527 1009 aaKnown RBP eCLIP20.03■□□□□ 0.8
SKA3-205ENST00000465471 MORF4L2Q15014 288 aa20.03■□□□□ 0.8
SKA3-205ENST00000465471 DBN1Q16643 649 aa20.03■□□□□ 0.8
SKA3-205ENST00000465471 WHAMMP3Q1A5X7 153 aa20.03■□□□□ 0.8
SKA3-205ENST00000465471 BCL7AQ4VC05 210 aa20.03■□□□□ 0.8
SKA3-205ENST00000465471 GUSBP11Q6P575 273 aa20.03■□□□□ 0.8
SKA3-205ENST00000465471 RAB44Q7Z6P3 723 aaPredicted RBP20.03■□□□□ 0.8
SKA3-205ENST00000465471 SERPINA9Q86WD7 417 aa20.03■□□□□ 0.8
SKA3-205ENST00000465471 NAGSQ8N159 534 aa20.03■□□□□ 0.8
SKA3-205ENST00000465471 HEXDCQ8WVB3 486 aa20.03■□□□□ 0.8
SKA3-205ENST00000465471 ZNF514Q96K75 400 aaPredicted RBP20.03■□□□□ 0.8
SKA3-205ENST00000465471 SIGLEC10Q96LC7 697 aa20.03■□□□□ 0.8
SKA3-205ENST00000465471 TTC25Q96NG3 672 aa20.03■□□□□ 0.8
SKA3-205ENST00000465471 COPS8Q99627 209 aa20.03■□□□□ 0.8
SKA3-205ENST00000465471 DPEP2Q9H4A9 486 aa20.03■□□□□ 0.8
SKA3-205ENST00000465471 EVA1BQ9NVM1 165 aa20.03■□□□□ 0.8
SKA3-205ENST00000465471 SIRPGQ9P1W8 387 aa20.03■□□□□ 0.8
SKA3-205ENST00000465471 KCNK6Q9Y257 313 aa20.03■□□□□ 0.8
SKA3-205ENST00000465471 DNMT3AQ9Y6K1 912 aaPredicted RBP20.03■□□□□ 0.8
SKA3-205ENST00000465471 ASXL3Q9C0F0 2248 aa20.03■□□□□ 0.8
SKA3-205ENST00000465471 MED19A0JLT2 244 aaPredicted RBP20.02■□□□□ 0.8
SKA3-205ENST00000465471 SDR42E2A6NKP2 422 aa20.02■□□□□ 0.8
SKA3-205ENST00000465471 B4DGG1 531 aa20.02■□□□□ 0.8
SKA3-205ENST00000465471 SMAPO00193 183 aa20.02■□□□□ 0.8
SKA3-205ENST00000465471 RAD51CO43502 376 aa20.02■□□□□ 0.8
SKA3-205ENST00000465471 URI1O94763 535 aaPredicted RBP20.02■□□□□ 0.8
SKA3-205ENST00000465471 CDK4P11802 303 aa20.02■□□□□ 0.8
SKA3-205ENST00000465471 ARNTP27540 789 aa20.02■□□□□ 0.8
SKA3-205ENST00000465471 DMPKQ09013 629 aa20.02■□□□□ 0.8
SKA3-205ENST00000465471 C14orf28Q4W4Y0 310 aa20.02■□□□□ 0.8
SKA3-205ENST00000465471 HIBCHQ6NVY1 386 aaPredicted RBP20.02■□□□□ 0.8
SKA3-205ENST00000465471 TMEM220Q6QAJ8 160 aa20.02■□□□□ 0.8
SKA3-205ENST00000465471 TRAPPC5Q8IUR0 188 aa20.02■□□□□ 0.8
SKA3-205ENST00000465471 PNPLA1Q8N8W4 532 aa20.02■□□□□ 0.8
SKA3-205ENST00000465471 OR4L1Q8NH43 312 aa20.02■□□□□ 0.8
SKA3-205ENST00000465471 ZDHHC1Q8WTX9 485 aa20.02■□□□□ 0.8
SKA3-205ENST00000465471 MFSD3Q96ES6 412 aa20.02■□□□□ 0.8
SKA3-205ENST00000465471 LINC00615Q96LM1 132 aaPredicted RBP20.02■□□□□ 0.8
SKA3-205ENST00000465471 PADI4Q9UM07 663 aa20.02■□□□□ 0.8
SKA3-205ENST00000465471 MRFAP1Q9Y605 127 aa20.02■□□□□ 0.8
SKA3-205ENST00000465471 COL27A1Q8IZC6 1860 aaPredicted RBP20.02■□□□□ 0.8
SKA3-205ENST00000465471 PTPRBP23467 1997 aa20.01■□□□□ 0.79
SKA3-205ENST00000465471 FAM237BA0A1B0GVD1 139 aa20.01■□□□□ 0.79
SKA3-205ENST00000465471 EML2O95834 649 aa20.01■□□□□ 0.79
SKA3-205ENST00000465471 PRAMEP78395 509 aa20.01■□□□□ 0.79
SKA3-205ENST00000465471 ITIH4Q14624 930 aa20.01■□□□□ 0.79
SKA3-205ENST00000465471 INSCQ1MX18 579 aa20.01■□□□□ 0.79
SKA3-205ENST00000465471 PLA2G4EQ3MJ16 856 aa20.01■□□□□ 0.79
SKA3-205ENST00000465471 KIAA0930Q6ICG6 404 aaPredicted RBP20.01■□□□□ 0.79
SKA3-205ENST00000465471 PACS1Q6VY07 963 aa20.01■□□□□ 0.79
SKA3-205ENST00000465471 MAATS1Q7Z4T9 603 aa20.01■□□□□ 0.79
SKA3-205ENST00000465471 TMEM135Q86UB9 458 aa20.01■□□□□ 0.79
SKA3-205ENST00000465471 OR6C4Q8NGE1 309 aa20.01■□□□□ 0.79
SKA3-205ENST00000465471 IFI44Q8TCB0 444 aa20.01■□□□□ 0.79
SKA3-205ENST00000465471 ZNF592Q92610 1267 aa20.01■□□□□ 0.79
SKA3-205ENST00000465471 NAT6Q93015 286 aa20.01■□□□□ 0.79
SKA3-205ENST00000465471 SGF29Q96ES7 293 aa20.01■□□□□ 0.79
SKA3-205ENST00000465471 SNF8Q96H20 258 aa20.01■□□□□ 0.79
SKA3-205ENST00000465471 KLC4Q9NSK0 619 aa20.01■□□□□ 0.79
SKA3-205ENST00000465471 GULP1Q9UBP9 304 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms