RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 ITGALP20701 1170 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 IVDP26440 423 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 PBLDP30039 288 aaPredicted RBP11.5□□□□□ -0.57
CUX1-207ENST00000465461 GTF2H3Q13889 308 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 SEMA3AQ14563 771 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 SEPT7Q16181 437 aaKnown RBP11.5□□□□□ -0.57
CUX1-207ENST00000465461 INSCQ1MX18 579 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 LDLRAP1Q5SW96 308 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 FNBP1LQ5T0N5 605 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 IZUMO3Q5VZ72 239 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 OGFOD3Q6PK18 319 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 LVRNQ6Q4G3 990 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 C11orf96Q7Z7L8 435 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 LDB1Q86U70 411 aaPredicted RBP11.5□□□□□ -0.57
CUX1-207ENST00000465461 LRRTM4Q86VH4 590 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 SERPINA9Q86WD7 417 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 TRAPPC5Q8IUR0 188 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 PPIL6Q8IXY8 311 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 NAGSQ8N159 534 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 NXPE1Q8N323 547 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 Q8N9G6 341 aaPredicted RBP11.5□□□□□ -0.57
CUX1-207ENST00000465461 GPR156Q8NFN8 814 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 OR6P1Q8NGX9 317 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 SLCO2A1Q92959 643 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 MFSD3Q96ES6 412 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 SERPINB12Q96P63 405 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 OSGEPL1Q9H4B0 414 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 RMI1Q9H9A7 625 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 PRDM8Q9NQV8 689 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 SMOXQ9NWM0 555 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 IL1RAPL1Q9NZN1 696 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 FAM8A1Q9UBU6 413 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 TBC1D29Q9UFV1 150 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 KLK13Q9UKR3 277 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 PRSS21Q9Y6M0 314 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 ARHGEF17Q96PE2 2063 aaPredicted RBP11.49□□□□□ -0.57
CUX1-207ENST00000465461 EME2A4GXA9 379 aaPredicted RBP11.49□□□□□ -0.57
CUX1-207ENST00000465461 GOLGA8KD6RF30 607 aa11.49□□□□□ -0.57
CUX1-207ENST00000465461 GOLGA8TH3BQL2 631 aa11.49□□□□□ -0.57
CUX1-207ENST00000465461 KMOO15229 486 aa11.49□□□□□ -0.57
CUX1-207ENST00000465461 SGTAO43765 313 aa11.49□□□□□ -0.57
CUX1-207ENST00000465461 POP7O75817 140 aaKnown RBP11.49□□□□□ -0.57
CUX1-207ENST00000465461 DKK1O94907 266 aa11.49□□□□□ -0.57
CUX1-207ENST00000465461 F7P08709 466 aaPredicted RBP11.49□□□□□ -0.57
CUX1-207ENST00000465461 PSMA3P25788 255 aa11.49□□□□□ -0.57
CUX1-207ENST00000465461 ACRV1P26436 265 aa11.49□□□□□ -0.57
CUX1-207ENST00000465461 PMLP29590 882 aa11.49□□□□□ -0.57
CUX1-207ENST00000465461 FOXN2P32314 431 aa11.49□□□□□ -0.57
CUX1-207ENST00000465461 DRG2P55039 364 aaKnown RBP11.49□□□□□ -0.57
CUX1-207ENST00000465461 SARNPP82979 210 aaKnown RBP11.49□□□□□ -0.57
CUX1-207ENST00000465461 CDK16Q00536 496 aa11.49□□□□□ -0.57
CUX1-207ENST00000465461 CACNG1Q06432 222 aa11.49□□□□□ -0.57
CUX1-207ENST00000465461 DBN1Q16643 649 aa11.49□□□□□ -0.57
CUX1-207ENST00000465461 C14orf28Q4W4Y0 310 aa11.49□□□□□ -0.57
CUX1-207ENST00000465461 CASC4Q6P4E1 433 aa11.49□□□□□ -0.57
CUX1-207ENST00000465461 FAM83HQ6ZRV2 1179 aaPredicted RBP11.49□□□□□ -0.57
CUX1-207ENST00000465461 RAB44Q7Z6P3 723 aaPredicted RBP11.49□□□□□ -0.57
CUX1-207ENST00000465461 ZNF761Q86XN6 746 aaPredicted RBP11.49□□□□□ -0.57
CUX1-207ENST00000465461 SDR16C5Q8N3Y7 309 aa11.49□□□□□ -0.57
CUX1-207ENST00000465461 MCUQ8NE86 351 aa11.49□□□□□ -0.57
CUX1-207ENST00000465461 ADAMTS14Q8WXS8 1223 aa11.49□□□□□ -0.57
CUX1-207ENST00000465461 GLMNQ92990 594 aa11.49□□□□□ -0.57
CUX1-207ENST00000465461 CCDC74AQ96AQ1 378 aa11.49□□□□□ -0.57
CUX1-207ENST00000465461 DCUN1D1Q96GG9 259 aa11.49□□□□□ -0.57
CUX1-207ENST00000465461 SCNM1Q9BWG6 230 aa11.49□□□□□ -0.57
CUX1-207ENST00000465461 IL22Q9GZX6 179 aa11.49□□□□□ -0.57
CUX1-207ENST00000465461 SYNDIG1Q9H7V2 258 aa11.49□□□□□ -0.57
CUX1-207ENST00000465461 TREX1Q9NSU2 369 aa11.49□□□□□ -0.57
CUX1-207ENST00000465461 ZDHHC3Q9NYG2 299 aa11.49□□□□□ -0.57
CUX1-207ENST00000465461 SCHIP1Q9P0W5 487 aaPredicted RBP11.49□□□□□ -0.57
CUX1-207ENST00000465461 SNX24Q9Y343 169 aa11.49□□□□□ -0.57
CUX1-207ENST00000465461 RNF215Q9Y6U7 377 aa11.49□□□□□ -0.57
CUX1-207ENST00000465461 SPTBN2O15020 2390 aa11.49□□□□□ -0.57
CUX1-207ENST00000465461 TRBV5-4A0A0C4DH59 114 aa11.48□□□□□ -0.57
CUX1-207ENST00000465461 PRAMEF33A0A0G2JMD5 474 aa11.48□□□□□ -0.57
CUX1-207ENST00000465461 RAD51CO43502 376 aa11.48□□□□□ -0.57
CUX1-207ENST00000465461 OR1I1O60431 355 aa11.48□□□□□ -0.57
CUX1-207ENST00000465461 RPL10P27635 214 aaKnown RBP11.48□□□□□ -0.57
CUX1-207ENST00000465461 RPIAP49247 311 aa11.48□□□□□ -0.57
CUX1-207ENST00000465461 DUSP3P51452 185 aaPredicted RBP11.48□□□□□ -0.57
CUX1-207ENST00000465461 ITGA8P53708 1063 aa11.48□□□□□ -0.57
CUX1-207ENST00000465461 PRAMEP78395 509 aa11.48□□□□□ -0.57
CUX1-207ENST00000465461 INSM1Q01101 510 aaPredicted RBP11.48□□□□□ -0.57
CUX1-207ENST00000465461 ACVR1Q04771 509 aa11.48□□□□□ -0.57
CUX1-207ENST00000465461 LRP8Q14114 963 aa11.48□□□□□ -0.57
CUX1-207ENST00000465461 NFE2L1Q14494 772 aa11.48□□□□□ -0.57
CUX1-207ENST00000465461 HLTFQ14527 1009 aaKnown RBP eCLIP11.48□□□□□ -0.57
CUX1-207ENST00000465461 MSS51Q4VC12 460 aa11.48□□□□□ -0.57
CUX1-207ENST00000465461 HP1BP3Q5SSJ5 553 aaPredicted RBP11.48□□□□□ -0.57
CUX1-207ENST00000465461 ARL14Q8N4G2 192 aa11.48□□□□□ -0.57
CUX1-207ENST00000465461 LILRA3Q8N6C8 439 aaPredicted RBP11.48□□□□□ -0.57
CUX1-207ENST00000465461 CLDN19Q8N6F1 224 aa11.48□□□□□ -0.57
CUX1-207ENST00000465461 OR4L1Q8NH43 312 aa11.48□□□□□ -0.57
CUX1-207ENST00000465461 MAPK15Q8TD08 544 aa11.48□□□□□ -0.57
CUX1-207ENST00000465461 ULK4Q96C45 1275 aa11.48□□□□□ -0.57
CUX1-207ENST00000465461 RUNDC3BQ96NL0 473 aa11.48□□□□□ -0.57
CUX1-207ENST00000465461 FCRL3Q96P31 734 aaPredicted RBP11.48□□□□□ -0.57
CUX1-207ENST00000465461 COPS8Q99627 209 aa11.48□□□□□ -0.57
CUX1-207ENST00000465461 CCDC3Q9BQI4 270 aa11.48□□□□□ -0.57
CUX1-207ENST00000465461 KIFC1Q9BW19 673 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms