RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 GJB5O95377 273 aa18.15■□□□□ 0.5
SYNE4-204ENST00000465425 TSPAN12O95859 305 aa18.15■□□□□ 0.5
SYNE4-204ENST00000465425 FCGR1AP12314 374 aa18.15■□□□□ 0.5
SYNE4-204ENST00000465425 OXTRP30559 389 aa18.15■□□□□ 0.5
SYNE4-204ENST00000465425 GSK3BP49841 420 aa18.15■□□□□ 0.5
SYNE4-204ENST00000465425 APLP1P51693 650 aa18.15■□□□□ 0.5
SYNE4-204ENST00000465425 POLR2JP52435 117 aaKnown RBP18.15■□□□□ 0.5
SYNE4-204ENST00000465425 UFM1P61960 85 aa18.15■□□□□ 0.5
SYNE4-204ENST00000465425 TMEM259Q4ZIN3 620 aa18.15■□□□□ 0.5
SYNE4-204ENST00000465425 CTSL3PQ5NE16 218 aa18.15■□□□□ 0.5
SYNE4-204ENST00000465425 CPNE9Q8IYJ1 553 aa18.15■□□□□ 0.5
SYNE4-204ENST00000465425 CDYL2Q8N8U2 506 aa18.15■□□□□ 0.5
SYNE4-204ENST00000465425 CD200R1Q8TD46 325 aa18.15■□□□□ 0.5
SYNE4-204ENST00000465425 CENPNQ96H22 339 aaPredicted RBP18.15■□□□□ 0.5
SYNE4-204ENST00000465425 BRINP2Q9C0B6 783 aa18.15■□□□□ 0.5
SYNE4-204ENST00000465425 DDX18Q9NVP1 670 aaKnown RBP18.15■□□□□ 0.5
SYNE4-204ENST00000465425 HCSTQ9UBK5 93 aa18.15■□□□□ 0.5
SYNE4-204ENST00000465425 EIF2B4Q9UI10 523 aaKnown RBP18.15■□□□□ 0.5
SYNE4-204ENST00000465425 LRFN2Q9ULH4 789 aa18.15■□□□□ 0.5
SYNE4-204ENST00000465425 SLC8A2Q9UPR5 921 aa18.15■□□□□ 0.5
SYNE4-204ENST00000465425 HTTP42858 3142 aa18.14■□□□□ 0.49
SYNE4-204ENST00000465425 A0A1B0GVM2 712 aa18.14■□□□□ 0.49
SYNE4-204ENST00000465425 H3BSA7 217 aa18.14■□□□□ 0.49
SYNE4-204ENST00000465425 MTHFD1P11586 935 aaKnown RBP18.14■□□□□ 0.49
SYNE4-204ENST00000465425 CORO1AP31146 461 aaKnown RBP18.14■□□□□ 0.49
SYNE4-204ENST00000465425 MRPL19P49406 292 aaKnown RBP18.14■□□□□ 0.49
SYNE4-204ENST00000465425 CLCN4P51793 760 aa18.14■□□□□ 0.49
SYNE4-204ENST00000465425 LIPEQ05469 1076 aa18.14■□□□□ 0.49
SYNE4-204ENST00000465425 TWF1Q12792 350 aa18.14■□□□□ 0.49
SYNE4-204ENST00000465425 AASDHQ4L235 1098 aaPredicted RBP18.14■□□□□ 0.49
SYNE4-204ENST00000465425 ATP6AP1LQ52LC2 224 aa18.14■□□□□ 0.49
SYNE4-204ENST00000465425 PAGE3Q5JUK9 113 aa18.14■□□□□ 0.49
SYNE4-204ENST00000465425 HECTD3Q5T447 861 aa18.14■□□□□ 0.49
SYNE4-204ENST00000465425 PRSS55Q6UWB4 352 aaPredicted RBP18.14■□□□□ 0.49
SYNE4-204ENST00000465425 FRA10AC1Q70Z53 315 aa18.14■□□□□ 0.49
SYNE4-204ENST00000465425 ADGRG5Q8IZF4 528 aa18.14■□□□□ 0.49
SYNE4-204ENST00000465425 DCBLD1Q8N8Z6 715 aa18.14■□□□□ 0.49
SYNE4-204ENST00000465425 MFSD2AQ8NA29 543 aa18.14■□□□□ 0.49
SYNE4-204ENST00000465425 PDZD8Q8NEN9 1154 aa18.14■□□□□ 0.49
SYNE4-204ENST00000465425 CASD1Q96PB1 797 aa18.14■□□□□ 0.49
SYNE4-204ENST00000465425 ELAC1Q9H777 363 aaKnown RBP18.14■□□□□ 0.49
SYNE4-204ENST00000465425 COMMD10Q9Y6G5 202 aa18.14■□□□□ 0.49
SYNE4-204ENST00000465425 E2F3O00716 465 aa18.14■□□□□ 0.49
SYNE4-204ENST00000465425 TBC1D4O60343 1298 aa18.14■□□□□ 0.49
SYNE4-204ENST00000465425 SYNCRIPO60506 623 aaKnown RBP18.14■□□□□ 0.49
SYNE4-204ENST00000465425 OR4F21O95013 312 aa18.14■□□□□ 0.49
SYNE4-204ENST00000465425 ASLP04424 464 aa18.14■□□□□ 0.49
SYNE4-204ENST00000465425 CHRM1P11229 460 aaPredicted RBP18.14■□□□□ 0.49
SYNE4-204ENST00000465425 CDH2P19022 906 aaPredicted RBP18.14■□□□□ 0.49
SYNE4-204ENST00000465425 PSMA3P25788 255 aa18.14■□□□□ 0.49
SYNE4-204ENST00000465425 TGFBIQ15582 683 aa18.14■□□□□ 0.49
SYNE4-204ENST00000465425 TIGD2Q4W5G0 525 aa18.14■□□□□ 0.49
SYNE4-204ENST00000465425 PDCD4Q53EL6 469 aaKnown RBP18.14■□□□□ 0.49
SYNE4-204ENST00000465425 RNF219Q5W0B1 726 aaPredicted RBP18.14■□□□□ 0.49
SYNE4-204ENST00000465425 C16orf59Q7L2K0 433 aa18.14■□□□□ 0.49
SYNE4-204ENST00000465425 EPHX4Q8IUS5 362 aa18.14■□□□□ 0.49
SYNE4-204ENST00000465425 CMTR2Q8IYT2 770 aaKnown RBP18.14■□□□□ 0.49
SYNE4-204ENST00000465425 ALDH16A1Q8IZ83 802 aa18.14■□□□□ 0.49
SYNE4-204ENST00000465425 TMEM199Q8N511 208 aa18.14■□□□□ 0.49
SYNE4-204ENST00000465425 TRPV3Q8NET8 790 aa18.14■□□□□ 0.49
SYNE4-204ENST00000465425 HM13Q8TCT9 377 aa18.14■□□□□ 0.49
SYNE4-204ENST00000465425 OAZ3Q9UMX2 235 aa18.14■□□□□ 0.49
SYNE4-204ENST00000465425 PLOD2O00469 737 aa18.13■□□□□ 0.49
SYNE4-204ENST00000465425 TSPAN3O60637 253 aa18.13■□□□□ 0.49
SYNE4-204ENST00000465425 CD9P21926 228 aa18.13■□□□□ 0.49
SYNE4-204ENST00000465425 SOX11P35716 441 aa18.13■□□□□ 0.49
SYNE4-204ENST00000465425 SGSHP51688 502 aa18.13■□□□□ 0.49
SYNE4-204ENST00000465425 HK3P52790 923 aa18.13■□□□□ 0.49
SYNE4-204ENST00000465425 TUBA4AP68366 448 aa18.13■□□□□ 0.49
SYNE4-204ENST00000465425 TMTC4Q5T4D3 741 aa18.13■□□□□ 0.49
SYNE4-204ENST00000465425 LRRC8DQ7L1W4 858 aa18.13■□□□□ 0.49
SYNE4-204ENST00000465425 FIBCD1Q8N539 461 aa18.13■□□□□ 0.49
SYNE4-204ENST00000465425 OR2T11Q8NH01 316 aa18.13■□□□□ 0.49
SYNE4-204ENST00000465425 PLD4Q96BZ4 506 aa18.13■□□□□ 0.49
SYNE4-204ENST00000465425 ADI1Q9BV57 179 aa18.13■□□□□ 0.49
SYNE4-204ENST00000465425 ZIM2Q9NZV7 527 aa18.13■□□□□ 0.49
SYNE4-204ENST00000465425 RSL24D1Q9UHA3 163 aaKnown RBP18.13■□□□□ 0.49
SYNE4-204ENST00000465425 CEPT1Q9Y6K0 416 aa18.13■□□□□ 0.49
SYNE4-204ENST00000465425 KANSL1LA0AUZ9 987 aa18.12■□□□□ 0.49
SYNE4-204ENST00000465425 ASPDHA6ND91 283 aa18.12■□□□□ 0.49
SYNE4-204ENST00000465425 COCHO43405 550 aa18.12■□□□□ 0.49
SYNE4-204ENST00000465425 ESR1P03372 595 aa18.12■□□□□ 0.49
SYNE4-204ENST00000465425 IRF1P10914 325 aa18.12■□□□□ 0.49
SYNE4-204ENST00000465425 PTGER3P43115 390 aa18.12■□□□□ 0.49
SYNE4-204ENST00000465425 CCT8P50990 548 aa18.12■□□□□ 0.49
SYNE4-204ENST00000465425 MERTKQ12866 999 aa18.12■□□□□ 0.49
SYNE4-204ENST00000465425 HABP4Q5JVS0 413 aaKnown RBP18.12■□□□□ 0.49
SYNE4-204ENST00000465425 TTC33Q6PID6 262 aaPredicted RBP18.12■□□□□ 0.49
SYNE4-204ENST00000465425 CHST9Q7L1S5 443 aa18.12■□□□□ 0.49
SYNE4-204ENST00000465425 PTRH1Q86Y79 214 aaKnown RBP18.12■□□□□ 0.49
SYNE4-204ENST00000465425 FBXO22Q8NEZ5 403 aa18.12■□□□□ 0.49
SYNE4-204ENST00000465425 CDK15Q96Q40 435 aa18.12■□□□□ 0.49
SYNE4-204ENST00000465425 ZNF382Q96SR6 550 aa18.12■□□□□ 0.49
SYNE4-204ENST00000465425 ZIC5Q96T25 663 aa18.12■□□□□ 0.49
SYNE4-204ENST00000465425 NMRK2Q9NPI5 230 aa18.12■□□□□ 0.49
SYNE4-204ENST00000465425 SMOXQ9NWM0 555 aa18.12■□□□□ 0.49
SYNE4-204ENST00000465425 ETAA1Q9NY74 926 aa18.12■□□□□ 0.49
SYNE4-204ENST00000465425 PKP3Q9Y446 797 aa18.12■□□□□ 0.49
SYNE4-204ENST00000465425 CHD5Q8TDI0 1954 aa18.12■□□□□ 0.49
SYNE4-204ENST00000465425 ZNF840PA6NDX5 716 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms