RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 BAHD1Q8TBE0 780 aaPredicted RBP16.74■□□□□ 0.27
USP39-211ENST00000465282 GLMNQ92990 594 aa16.74■□□□□ 0.27
USP39-211ENST00000465282 STAMBPL1Q96FJ0 436 aa16.74■□□□□ 0.27
USP39-211ENST00000465282 F8W8V4 182 aa16.73■□□□□ 0.27
USP39-211ENST00000465282 CCL22O00626 93 aa16.73■□□□□ 0.27
USP39-211ENST00000465282 GOT2P00505 430 aaKnown RBP16.73■□□□□ 0.27
USP39-211ENST00000465282 C1orf61Q13536 156 aa16.73■□□□□ 0.27
USP39-211ENST00000465282 ANKRD20A4Q4UJ75 823 aa16.73■□□□□ 0.27
USP39-211ENST00000465282 KHDC1Q4VXA5 237 aaKnown RBP16.73■□□□□ 0.27
USP39-211ENST00000465282 FNBP1LQ5T0N5 605 aa16.73■□□□□ 0.27
USP39-211ENST00000465282 C6orf132Q5T0Z8 1188 aa16.73■□□□□ 0.27
USP39-211ENST00000465282 MARK2Q7KZI7 788 aaKnown RBP16.73■□□□□ 0.27
USP39-211ENST00000465282 TAS2R42Q7RTR8 314 aa16.73■□□□□ 0.27
USP39-211ENST00000465282 TAF8Q7Z7C8 310 aa16.73■□□□□ 0.27
USP39-211ENST00000465282 SEC14L1Q92503 715 aa16.73■□□□□ 0.27
USP39-211ENST00000465282 MFSD3Q96ES6 412 aa16.73■□□□□ 0.27
USP39-211ENST00000465282 EBNA1BP2Q99848 306 aaKnown RBP16.73■□□□□ 0.27
USP39-211ENST00000465282 TIMM29Q9BSF4 260 aa16.73■□□□□ 0.27
USP39-211ENST00000465282 LRRC1Q9BTT6 524 aa16.73■□□□□ 0.27
USP39-211ENST00000465282 FAM129AQ9BZQ8 928 aa16.73■□□□□ 0.27
USP39-211ENST00000465282 FOXP3Q9BZS1 431 aa16.73■□□□□ 0.27
USP39-211ENST00000465282 PHACTR1Q9C0D0 580 aa16.73■□□□□ 0.27
USP39-211ENST00000465282 L2HGDHQ9H9P8 463 aa16.73■□□□□ 0.27
USP39-211ENST00000465282 ARFGAP3Q9NP61 516 aa16.73■□□□□ 0.27
USP39-211ENST00000465282 BTBD3Q9Y2F9 522 aa16.73■□□□□ 0.27
USP39-211ENST00000465282 MAD1L1Q9Y6D9 718 aa16.73■□□□□ 0.27
USP39-211ENST00000465282 RPS6KL1Q9Y6S9 549 aa16.73■□□□□ 0.27
USP39-211ENST00000465282 GOLGA4Q13439 2230 aaKnown RBP16.73■□□□□ 0.27
USP39-211ENST00000465282 QSOX1O00391 747 aa16.72■□□□□ 0.27
USP39-211ENST00000465282 PFDN6O15212 129 aa16.72■□□□□ 0.27
USP39-211ENST00000465282 EIF3HO15372 352 aaKnown RBP eCLIP16.72■□□□□ 0.27
USP39-211ENST00000465282 CD3EAPO15446 510 aaKnown RBP16.72■□□□□ 0.27
USP39-211ENST00000465282 FFAR2O15552 330 aa16.72■□□□□ 0.27
USP39-211ENST00000465282 GPR39O43194 453 aa16.72■□□□□ 0.27
USP39-211ENST00000465282 MTX2O75431 263 aa16.72■□□□□ 0.27
USP39-211ENST00000465282 LDOC1O95751 146 aaPredicted RBP16.72■□□□□ 0.27
USP39-211ENST00000465282 ATP1B2P14415 290 aaPredicted RBP16.72■□□□□ 0.27
USP39-211ENST00000465282 VCLP18206 1134 aa16.72■□□□□ 0.27
USP39-211ENST00000465282 PGAM1P18669 254 aa16.72■□□□□ 0.27
USP39-211ENST00000465282 NSG1P42857 185 aa16.72■□□□□ 0.27
USP39-211ENST00000465282 RPIAP49247 311 aa16.72■□□□□ 0.27
USP39-211ENST00000465282 TTPAP49638 278 aa16.72■□□□□ 0.27
USP39-211ENST00000465282 MRPS25P82663 173 aaKnown RBP16.72■□□□□ 0.27
USP39-211ENST00000465282 CTBSQ01459 385 aa16.72■□□□□ 0.27
USP39-211ENST00000465282 DHX9Q08211 1270 aaKnown RBP16.72■□□□□ 0.27
USP39-211ENST00000465282 DNTTIP2Q5QJE6 756 aaKnown RBP16.72■□□□□ 0.27
USP39-211ENST00000465282 ZNF648Q5T619 568 aaPredicted RBP16.72■□□□□ 0.27
USP39-211ENST00000465282 MRNIPQ6NTE8 343 aa16.72■□□□□ 0.27
USP39-211ENST00000465282 PSAPL1Q6NUJ1 521 aa16.72■□□□□ 0.27
USP39-211ENST00000465282 PACS1Q6VY07 963 aa16.72■□□□□ 0.27
USP39-211ENST00000465282 LMNTD2Q8IXW0 634 aa16.72■□□□□ 0.27
USP39-211ENST00000465282 PIANPQ8IYJ0 282 aa16.72■□□□□ 0.27
USP39-211ENST00000465282 RASGEF1AQ8N9B8 481 aa16.72■□□□□ 0.27
USP39-211ENST00000465282 GPR150Q8NGU9 434 aa16.72■□□□□ 0.27
USP39-211ENST00000465282 GABPB2Q8TAK5 448 aaPredicted RBP16.72■□□□□ 0.27
USP39-211ENST00000465282 ART4Q93070 314 aa16.72■□□□□ 0.27
USP39-211ENST00000465282 TCF12Q99081 682 aa16.72■□□□□ 0.27
USP39-211ENST00000465282 BOCQ9BWV1 1114 aa16.72■□□□□ 0.27
USP39-211ENST00000465282 DPH5Q9H2P9 285 aa16.72■□□□□ 0.27
USP39-211ENST00000465282 FAM96AQ9H5X1 160 aa16.72■□□□□ 0.27
USP39-211ENST00000465282 CATSPERZQ9NTU4 200 aa16.72■□□□□ 0.27
USP39-211ENST00000465282 FTSJ1Q9UET6 329 aa16.72■□□□□ 0.27
USP39-211ENST00000465282 CNOT1A5YKK6 2376 aaKnown RBP16.72■□□□□ 0.27
USP39-211ENST00000465282 E7ESA3 106 aa16.71■□□□□ 0.27
USP39-211ENST00000465282 TRIM38O00635 465 aa16.71■□□□□ 0.27
USP39-211ENST00000465282 TNFSF14O43557 240 aa16.71■□□□□ 0.27
USP39-211ENST00000465282 SIGLEC6O43699 453 aa16.71■□□□□ 0.27
USP39-211ENST00000465282 AP2A2O94973 939 aa16.71■□□□□ 0.27
USP39-211ENST00000465282 VAPBO95292 243 aa16.71■□□□□ 0.27
USP39-211ENST00000465282 GSTM1P09488 218 aa16.71■□□□□ 0.27
USP39-211ENST00000465282 ZNF7P17097 686 aaPredicted RBP16.71■□□□□ 0.27
USP39-211ENST00000465282 CA5AP35218 305 aa16.71■□□□□ 0.27
USP39-211ENST00000465282 ID4P47928 161 aa16.71■□□□□ 0.27
USP39-211ENST00000465282 DUSP3P51452 185 aaPredicted RBP16.71■□□□□ 0.27
USP39-211ENST00000465282 GSTM4Q03013 218 aa16.71■□□□□ 0.27
USP39-211ENST00000465282 TRIP6Q15654 476 aaKnown RBP16.71■□□□□ 0.27
USP39-211ENST00000465282 DEFB133Q30KQ1 61 aa16.71■□□□□ 0.27
USP39-211ENST00000465282 PROX2Q3B8N5 592 aa16.71■□□□□ 0.27
USP39-211ENST00000465282 BBS9Q3SYG4 887 aa16.71■□□□□ 0.27
USP39-211ENST00000465282 BCL7AQ4VC05 210 aa16.71■□□□□ 0.27
USP39-211ENST00000465282 OGFOD3Q6PK18 319 aa16.71■□□□□ 0.27
USP39-211ENST00000465282 CHST15Q7LFX5 561 aaPredicted RBP16.71■□□□□ 0.27
USP39-211ENST00000465282 SDCCAG8Q86SQ7 713 aaPredicted RBP16.71■□□□□ 0.27
USP39-211ENST00000465282 NRROSQ86YC3 692 aa16.71■□□□□ 0.27
USP39-211ENST00000465282 TRAPPC5Q8IUR0 188 aa16.71■□□□□ 0.27
USP39-211ENST00000465282 NOA1Q8NC60 698 aaKnown RBP16.71■□□□□ 0.27
USP39-211ENST00000465282 FAM46DQ8NEK8 389 aa16.71■□□□□ 0.27
USP39-211ENST00000465282 DEFB124Q8NES8 71 aa16.71■□□□□ 0.27
USP39-211ENST00000465282 LINC00615Q96LM1 132 aaPredicted RBP16.71■□□□□ 0.27
USP39-211ENST00000465282 CAMK1GQ96NX5 476 aa16.71■□□□□ 0.27
USP39-211ENST00000465282 CARD6Q9BX69 1037 aa16.71■□□□□ 0.27
USP39-211ENST00000465282 VPS37BQ9H9H4 285 aa16.71■□□□□ 0.27
USP39-211ENST00000465282 GRHL1Q9NZI5 618 aa16.71■□□□□ 0.27
USP39-211ENST00000465282 TEX264Q9Y6I9 313 aa16.71■□□□□ 0.27
USP39-211ENST00000465282 FAM169AQ9Y6X4 670 aa16.71■□□□□ 0.27
USP39-211ENST00000465282 DCHS1Q96JQ0 3298 aa16.7■□□□□ 0.26
USP39-211ENST00000465282 ZCWPW2A0A1B0GU75 182 aa16.7■□□□□ 0.26
USP39-211ENST00000465282 OR51F1A6NGY5 319 aa16.7■□□□□ 0.26
USP39-211ENST00000465282 CELA2BP08218 269 aaPredicted RBP16.7■□□□□ 0.26
USP39-211ENST00000465282 CDK4P11802 303 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms