RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 PCDHGA8Q9Y5G5 932 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 DGKBQ9Y6T7 804 aa7.24□□□□□ -1.25
USP48-206ENST00000464577 PAPPA2Q9BXP8 1791 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 G3V2T6 193 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 ARNTLO00327 626 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 SLC1A7O00341 560 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 IFRD1O00458 451 aaPredicted RBP7.23□□□□□ -1.25
USP48-206ENST00000464577 STX16O14662 325 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 KPNA6O60684 536 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 GPR32O75388 356 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 CRCPO75575 148 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 SOAT2O75908 522 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 NDST3O95803 873 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 CHEK2O96017 543 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 CHRNA1P02708 482 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 ZNF37AP17032 561 aaPredicted RBP7.23□□□□□ -1.25
USP48-206ENST00000464577 RYKP34925 604 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 MTHFRP42898 656 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 GSSP48637 474 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 TPD52P55327 224 aaPredicted RBP7.23□□□□□ -1.25
USP48-206ENST00000464577 UFM1P61960 85 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 ERVK-8P63133 956 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 ECT2LQ008S8 904 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 IFITM3Q01628 133 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 ACVR1Q04771 509 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 CD47Q08722 323 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 EIF4EBP2Q13542 120 aaPredicted RBP7.23□□□□□ -1.25
USP48-206ENST00000464577 MAPRE1Q15691 268 aaKnown RBP7.23□□□□□ -1.25
USP48-206ENST00000464577 KCNJ8Q15842 424 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 PFKFB4Q16877 469 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 CTU2Q2VPK5 515 aaKnown RBP7.23□□□□□ -1.25
USP48-206ENST00000464577 TIGD2Q4W5G0 525 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 PERM1Q5SV97 790 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 WSCD1Q658N2 575 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 ANKS6Q68DC2 871 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 LAIR2Q6ISS4 152 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 ZNF549Q6P9A3 640 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 SLC2A7Q6PXP3 512 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 PRSS48Q7RTY5 328 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 PIWIL3Q7Z3Z3 882 aaKnown RBP7.23□□□□□ -1.25
USP48-206ENST00000464577 LACC1Q8IV20 430 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 DTWD1Q8N5C7 304 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 OR7A2PQ8NGA2 310 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 OR52K2Q8NGK3 314 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 ZFP90Q8TF47 636 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 EDEM1Q92611 657 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 SGCDQ92629 289 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 HPS1Q92902 700 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 PEX13Q92968 403 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 EXT2Q93063 718 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 RNF34Q969K3 372 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 KIAA1191Q96A73 305 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 IMP4Q96G21 291 aaKnown RBP7.23□□□□□ -1.25
USP48-206ENST00000464577 RPL10LQ96L21 214 aaKnown RBP7.23□□□□□ -1.25
USP48-206ENST00000464577 TEX37Q96LM6 180 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 ZNF599Q96NL3 588 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 NSUN5Q96P11 429 aaKnown RBP7.23□□□□□ -1.25
USP48-206ENST00000464577 AMBRA1Q9C0C7 1298 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 ATXN3LQ9H3M9 355 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 GORASP2Q9H8Y8 452 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 GOLGA2P5Q9HBQ8 144 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 INTS7Q9NVH2 962 aaKnown RBP7.23□□□□□ -1.25
USP48-206ENST00000464577 ST14Q9Y5Y6 855 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 ZFC3H1O60293 1989 aaKnown RBP7.23□□□□□ -1.25
USP48-206ENST00000464577 FAM92AA1XBS5 289 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 LRRC14BA6NHZ5 514 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 H3BRB1 525 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 M0QX08 132 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 SNX2O60749 519 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 INMTO95050 263 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 MLYCDO95822 493 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 UROSP10746 265 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 SLC2A3P11169 496 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 BMP4P12644 408 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 HOXD8P13378 290 aaPredicted RBP7.23□□□□□ -1.25
USP48-206ENST00000464577 DARSP14868 501 aaKnown RBP7.23□□□□□ -1.25
USP48-206ENST00000464577 HOXB6P17509 224 aaKnown RBP7.23□□□□□ -1.25
USP48-206ENST00000464577 OGNP20774 298 aaKnown RBP7.23□□□□□ -1.25
USP48-206ENST00000464577 CES1P23141 567 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 ACVR2AP27037 513 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 LHX1P48742 406 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 ARSDP51689 593 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 KPNA1P52294 538 aaPredicted RBP7.23□□□□□ -1.25
USP48-206ENST00000464577 ATN1P54259 1190 aaPredicted RBP7.23□□□□□ -1.25
USP48-206ENST00000464577 TIAL1Q01085 375 aaKnown RBP eCLIP7.23□□□□□ -1.25
USP48-206ENST00000464577 PRKG2Q13237 762 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 VGLL4Q14135 290 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 INAQ16352 499 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 PCSK7Q16549 785 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 HIST2H2ACQ16777 129 aaPredicted RBP7.23□□□□□ -1.25
USP48-206ENST00000464577 MEP1AQ16819 746 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 IMPG1Q17R60 797 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 RFX4Q33E94 735 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 INAVAQ3KP66 663 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 ZC3H12BQ5HYM0 836 aaKnown RBP7.23□□□□□ -1.25
USP48-206ENST00000464577 NOMO2Q5JPE7 1267 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 ARTNQ5T4W7 220 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 ZNF691Q5VV52 312 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 SULT1C3Q6IMI6 304 aa7.23□□□□□ -1.25
USP48-206ENST00000464577 DLEU7Q6UYE1 221 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms