RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 SOWAHDA6NJG2 315 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 STK10O94804 968 aaKnown RBP11.74□□□□□ -0.53
RTCB-202ENST00000463455 TJP3O95049 919 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 PIRTP0C851 137 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 HGFP14210 728 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 VCLP18206 1134 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 XRCC1P18887 633 aaPredicted RBP11.74□□□□□ -0.53
RTCB-202ENST00000463455 CSF2RBP32927 897 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 CSTF2P33240 577 aaKnown RBP eCLIP11.74□□□□□ -0.53
RTCB-202ENST00000463455 SPAM1P38567 509 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 GEMP55040 296 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 ITGA9Q13797 1035 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 C16orf72Q14CZ0 275 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 SIRPB2Q5JXA9 342 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 CCDC181Q5TID7 509 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 AGAP9Q5VTM2 703 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 ALS2CLQ60I27 953 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 XKR5Q6UX68 686 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 CCDC81Q6ZN84 652 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 USP53Q70EK8 1073 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 CDKL3Q8IVW4 592 aaPredicted RBP11.74□□□□□ -0.53
RTCB-202ENST00000463455 RBM12BQ8IXT5 1001 aaKnown RBP11.74□□□□□ -0.53
RTCB-202ENST00000463455 TTC30BQ8N4P2 665 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 LRRC57Q8N9N7 239 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 OXNAD1Q96HP4 312 aaPredicted RBP11.74□□□□□ -0.53
RTCB-202ENST00000463455 CCDC74BQ96LY2 380 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 TEFMQ96QE5 360 aaKnown RBP11.74□□□□□ -0.53
RTCB-202ENST00000463455 TAAR9Q96RI9 348 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 DDA1Q9BW61 102 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 ASPSCR1Q9BZE9 553 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 OSBPL8Q9BZF1 889 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 POT1Q9NUX5 634 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 SMOXQ9NWM0 555 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 UBP1Q9NZI7 540 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 IL17CQ9P0M4 197 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 IMPACTQ9P2X3 320 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 RSPH14Q9UHP6 348 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 KCNK6Q9Y257 313 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 AAR2Q9Y312 384 aaKnown RBP11.74□□□□□ -0.53
RTCB-202ENST00000463455 PKP3Q9Y446 797 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 PCDHB11Q9Y5F2 797 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 SPO11Q9Y5K1 396 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 PCYT1BQ9Y5K3 369 aaPredicted RBP11.74□□□□□ -0.53
RTCB-202ENST00000463455 BAHCC1Q9P281 2608 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 COL6A6A6NMZ7 2263 aa11.74□□□□□ -0.53
RTCB-202ENST00000463455 PRAMEF33A0A0G2JMD5 474 aa11.73□□□□□ -0.53
RTCB-202ENST00000463455 MIF4GDA9UHW6 222 aaKnown RBP11.73□□□□□ -0.53
RTCB-202ENST00000463455 STMND1H3BQB6 276 aa11.73□□□□□ -0.53
RTCB-202ENST00000463455 H7C0C1 242 aa11.73□□□□□ -0.53
RTCB-202ENST00000463455 PRAMEF10O60809 474 aa11.73□□□□□ -0.53
RTCB-202ENST00000463455 CDK14O94921 469 aa11.73□□□□□ -0.53
RTCB-202ENST00000463455 ZNF7P17097 686 aaPredicted RBP11.73□□□□□ -0.53
RTCB-202ENST00000463455 ITIH1P19827 911 aa11.73□□□□□ -0.53
RTCB-202ENST00000463455 ATP5OP48047 213 aa11.73□□□□□ -0.53
RTCB-202ENST00000463455 UBE2IP63279 158 aaKnown RBP11.73□□□□□ -0.53
RTCB-202ENST00000463455 PDE1BQ01064 536 aa11.73□□□□□ -0.53
RTCB-202ENST00000463455 OTUD4Q01804 1114 aaKnown RBP11.73□□□□□ -0.53
RTCB-202ENST00000463455 GTF2H3Q13889 308 aa11.73□□□□□ -0.53
RTCB-202ENST00000463455 INSCQ1MX18 579 aa11.73□□□□□ -0.53
RTCB-202ENST00000463455 LDLRAP1Q5SW96 308 aa11.73□□□□□ -0.53
RTCB-202ENST00000463455 ARHGAP40Q5TG30 622 aa11.73□□□□□ -0.53
RTCB-202ENST00000463455 ABRAXAS1Q6UWZ7 409 aa11.73□□□□□ -0.53
RTCB-202ENST00000463455 GLT6D1Q7Z4J2 308 aa11.73□□□□□ -0.53
RTCB-202ENST00000463455 DTX1Q86Y01 620 aa11.73□□□□□ -0.53
RTCB-202ENST00000463455 SYCE1Q8N0S2 351 aa11.73□□□□□ -0.53
RTCB-202ENST00000463455 DDHD1Q8NEL9 900 aa11.73□□□□□ -0.53
RTCB-202ENST00000463455 IPMKQ8NFU5 416 aa11.73□□□□□ -0.53
RTCB-202ENST00000463455 ACTL9Q8TC94 416 aa11.73□□□□□ -0.53
RTCB-202ENST00000463455 USP7Q93009 1102 aa11.73□□□□□ -0.53
RTCB-202ENST00000463455 LRRC45Q96CN5 670 aa11.73□□□□□ -0.53
RTCB-202ENST00000463455 ZNF514Q96K75 400 aaPredicted RBP11.73□□□□□ -0.53
RTCB-202ENST00000463455 RBSNQ9H1K0 784 aa11.73□□□□□ -0.53
RTCB-202ENST00000463455 CPNE5Q9HCH3 593 aa11.73□□□□□ -0.53
RTCB-202ENST00000463455 IL26Q9NPH9 171 aa11.73□□□□□ -0.53
RTCB-202ENST00000463455 KLC4Q9NSK0 619 aa11.73□□□□□ -0.53
RTCB-202ENST00000463455 CPNE7Q9UBL6 633 aa11.73□□□□□ -0.53
RTCB-202ENST00000463455 FEZ2Q9UHY8 353 aaPredicted RBP11.73□□□□□ -0.53
RTCB-202ENST00000463455 PRKAB1Q9Y478 270 aa11.73□□□□□ -0.53
RTCB-202ENST00000463455 DNMT3AQ9Y6K1 912 aaPredicted RBP11.73□□□□□ -0.53
RTCB-202ENST00000463455 MGAQ8IWI9 3026 aa11.73□□□□□ -0.53
RTCB-202ENST00000463455 MN1Q10571 1320 aaPredicted RBP11.72□□□□□ -0.53
RTCB-202ENST00000463455 C5orf60A6NFR6 353 aa11.72□□□□□ -0.53
RTCB-202ENST00000463455 C9orf172C9J069 976 aa11.72□□□□□ -0.53
RTCB-202ENST00000463455 AURKAO14965 403 aa11.72□□□□□ -0.53
RTCB-202ENST00000463455 TOX3O15405 576 aaPredicted RBP11.72□□□□□ -0.53
RTCB-202ENST00000463455 EML2O95834 649 aa11.72□□□□□ -0.53
RTCB-202ENST00000463455 SLC4A1P02730 911 aa11.72□□□□□ -0.53
RTCB-202ENST00000463455 ANKRD34CP0C6C1 535 aa11.72□□□□□ -0.53
RTCB-202ENST00000463455 RBP3P10745 1247 aa11.72□□□□□ -0.53
RTCB-202ENST00000463455 RBL1P28749 1068 aa11.72□□□□□ -0.53
RTCB-202ENST00000463455 CDC25BP30305 580 aa11.72□□□□□ -0.53
RTCB-202ENST00000463455 ETV5P41161 510 aa11.72□□□□□ -0.53
RTCB-202ENST00000463455 MAPK10P53779 464 aa11.72□□□□□ -0.53
RTCB-202ENST00000463455 NAP1L1P55209 391 aaKnown RBP11.72□□□□□ -0.53
RTCB-202ENST00000463455 CFHR1Q03591 330 aa11.72□□□□□ -0.53
RTCB-202ENST00000463455 DMPKQ09013 629 aa11.72□□□□□ -0.53
RTCB-202ENST00000463455 C19orf57Q0VDD7 668 aa11.72□□□□□ -0.53
RTCB-202ENST00000463455 TMEM115Q12893 351 aaPredicted RBP11.72□□□□□ -0.53
RTCB-202ENST00000463455 COL9A2Q14055 689 aaPredicted RBP11.72□□□□□ -0.53
RTCB-202ENST00000463455 PRPSAP1Q14558 356 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms