RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 CREBBPQ92793 2442 aa20.41■□□□□ 0.86
CPSF7-209ENST00000463244 PIPSLA2A3N6 862 aa20.4■□□□□ 0.86
CPSF7-209ENST00000463244 PDZK1P1A8MUH7 402 aa20.4■□□□□ 0.86
CPSF7-209ENST00000463244 KMOO15229 486 aa20.4■□□□□ 0.86
CPSF7-209ENST00000463244 PDGFAP04085 211 aa20.4■□□□□ 0.86
CPSF7-209ENST00000463244 CYP1A2P05177 515 aa20.4■□□□□ 0.86
CPSF7-209ENST00000463244 BRAFP15056 766 aa20.4■□□□□ 0.86
CPSF7-209ENST00000463244 ZNF7P17097 686 aaPredicted RBP20.4■□□□□ 0.86
CPSF7-209ENST00000463244 UQCRFS1P47985 274 aa20.4■□□□□ 0.86
CPSF7-209ENST00000463244 DNASE1L3Q13609 305 aa20.4■□□□□ 0.86
CPSF7-209ENST00000463244 GALNT3Q14435 633 aa20.4■□□□□ 0.86
CPSF7-209ENST00000463244 SEPT7Q16181 437 aaKnown RBP20.4■□□□□ 0.86
CPSF7-209ENST00000463244 HADHQ16836 314 aaKnown RBP20.4■□□□□ 0.86
CPSF7-209ENST00000463244 FILIP1LQ4L180 1135 aa20.4■□□□□ 0.86
CPSF7-209ENST00000463244 CACHD1Q5VU97 1274 aa20.4■□□□□ 0.86
CPSF7-209ENST00000463244 ALS2CLQ60I27 953 aa20.4■□□□□ 0.86
CPSF7-209ENST00000463244 HGSNATQ68CP4 663 aa20.4■□□□□ 0.86
CPSF7-209ENST00000463244 PDPK2PQ6A1A2 396 aa20.4■□□□□ 0.86
CPSF7-209ENST00000463244 PPP1R3BQ86XI6 285 aa20.4■□□□□ 0.86
CPSF7-209ENST00000463244 APLFQ8IW19 511 aaPredicted RBP20.4■□□□□ 0.86
CPSF7-209ENST00000463244 GLYATL1Q969I3 302 aa20.4■□□□□ 0.86
CPSF7-209ENST00000463244 HDAC11Q96DB2 347 aa20.4■□□□□ 0.86
CPSF7-209ENST00000463244 TIMM29Q9BSF4 260 aa20.4■□□□□ 0.86
CPSF7-209ENST00000463244 SLC40A1Q9NP59 571 aa20.4■□□□□ 0.86
CPSF7-209ENST00000463244 LHX9Q9NQ69 397 aa20.4■□□□□ 0.86
CPSF7-209ENST00000463244 NFKBIL1Q9UBC1 381 aaPredicted RBP20.4■□□□□ 0.86
CPSF7-209ENST00000463244 EPHA6Q9UF33 1036 aa20.4■□□□□ 0.86
CPSF7-209ENST00000463244 DNAJC16Q9Y2G8 782 aa20.4■□□□□ 0.86
CPSF7-209ENST00000463244 SHANK1Q9Y566 2161 aa20.4■□□□□ 0.86
CPSF7-209ENST00000463244 CRYBG3Q68DQ2 2970 aa20.39■□□□□ 0.85
CPSF7-209ENST00000463244 MYO1FO00160 1098 aa20.39■□□□□ 0.85
CPSF7-209ENST00000463244 MT-ND3P03897 115 aa20.39■□□□□ 0.85
CPSF7-209ENST00000463244 MX2P20592 715 aa20.39■□□□□ 0.85
CPSF7-209ENST00000463244 RPL10P27635 214 aaKnown RBP20.39■□□□□ 0.85
CPSF7-209ENST00000463244 CASP14P31944 242 aa20.39■□□□□ 0.85
CPSF7-209ENST00000463244 SSR1P43307 286 aaKnown RBP20.39■□□□□ 0.85
CPSF7-209ENST00000463244 GBE1Q04446 702 aa20.39■□□□□ 0.85
CPSF7-209ENST00000463244 SEMA5AQ13591 1074 aa20.39■□□□□ 0.85
CPSF7-209ENST00000463244 GPR18Q14330 331 aa20.39■□□□□ 0.85
CPSF7-209ENST00000463244 ABRAXAS1Q6UWZ7 409 aa20.39■□□□□ 0.85
CPSF7-209ENST00000463244 LRRTM4Q86VH4 590 aa20.39■□□□□ 0.85
CPSF7-209ENST00000463244 ZNF547Q8IVP9 402 aa20.39■□□□□ 0.85
CPSF7-209ENST00000463244 RBM12BQ8IXT5 1001 aaKnown RBP20.39■□□□□ 0.85
CPSF7-209ENST00000463244 TRAM1L1Q8N609 369 aa20.39■□□□□ 0.85
CPSF7-209ENST00000463244 KCTD6Q8NC69 237 aa20.39■□□□□ 0.85
CPSF7-209ENST00000463244 CT55Q8WUE5 264 aa20.39■□□□□ 0.85
CPSF7-209ENST00000463244 FAF2Q96CS3 445 aa20.39■□□□□ 0.85
CPSF7-209ENST00000463244 ZDHHC12Q96GR4 267 aa20.39■□□□□ 0.85
CPSF7-209ENST00000463244 BRD8Q9H0E9 1235 aa20.39■□□□□ 0.85
CPSF7-209ENST00000463244 A0A1B0GTH6 734 aa20.38■□□□□ 0.85
CPSF7-209ENST00000463244 OR52A4PA6NMU1 304 aa20.38■□□□□ 0.85
CPSF7-209ENST00000463244 C21orf140B9A014 251 aa20.38■□□□□ 0.85
CPSF7-209ENST00000463244 DNAJB5O75953 348 aa20.38■□□□□ 0.85
CPSF7-209ENST00000463244 JCHAINP01591 159 aa20.38■□□□□ 0.85
CPSF7-209ENST00000463244 NELFEP18615 380 aaKnown RBP20.38■□□□□ 0.85
CPSF7-209ENST00000463244 GJC1P36383 396 aa20.38■□□□□ 0.85
CPSF7-209ENST00000463244 SLC10A2Q12908 348 aaPredicted RBP20.38■□□□□ 0.85
CPSF7-209ENST00000463244 PDK2Q15119 407 aa20.38■□□□□ 0.85
CPSF7-209ENST00000463244 AGAP9Q5VTM2 703 aa20.38■□□□□ 0.85
CPSF7-209ENST00000463244 CAPRIN2Q6IMN6 1127 aaKnown RBP20.38■□□□□ 0.85
CPSF7-209ENST00000463244 CYB5D1Q6P9G0 228 aa20.38■□□□□ 0.85
CPSF7-209ENST00000463244 WASH2PQ6VEQ5 465 aa20.38■□□□□ 0.85
CPSF7-209ENST00000463244 FAM92BQ6ZTR7 304 aa20.38■□□□□ 0.85
CPSF7-209ENST00000463244 PQLC3Q8N755 202 aa20.38■□□□□ 0.85
CPSF7-209ENST00000463244 TRIB3Q96RU7 358 aa20.38■□□□□ 0.85
CPSF7-209ENST00000463244 TRIM55Q9BYV6 548 aa20.38■□□□□ 0.85
CPSF7-209ENST00000463244 RAB33BQ9H082 229 aa20.38■□□□□ 0.85
CPSF7-209ENST00000463244 WASH6PQ9NQA3 447 aa20.38■□□□□ 0.85
CPSF7-209ENST00000463244 RAD18Q9NS91 495 aa20.38■□□□□ 0.85
CPSF7-209ENST00000463244 SHOC2Q9UQ13 582 aa20.38■□□□□ 0.85
CPSF7-209ENST00000463244 KCNK1O00180 336 aa20.37■□□□□ 0.85
CPSF7-209ENST00000463244 VPS4BO75351 444 aa20.37■□□□□ 0.85
CPSF7-209ENST00000463244 MTX2O75431 263 aa20.37■□□□□ 0.85
CPSF7-209ENST00000463244 TIAF1O95411 115 aa20.37■□□□□ 0.85
CPSF7-209ENST00000463244 TYRO3Q06418 890 aa20.37■□□□□ 0.85
CPSF7-209ENST00000463244 ZBTB17Q13105 803 aa20.37■□□□□ 0.85
CPSF7-209ENST00000463244 IRGCQ6NXR0 463 aa20.37■□□□□ 0.85
CPSF7-209ENST00000463244 TMC3Q7Z5M5 1100 aa20.37■□□□□ 0.85
CPSF7-209ENST00000463244 CPNE8Q86YQ8 564 aa20.37■□□□□ 0.85
CPSF7-209ENST00000463244 CNTD1Q8N815 330 aa20.37■□□□□ 0.85
CPSF7-209ENST00000463244 GALNT11Q8NCW6 608 aa20.37■□□□□ 0.85
CPSF7-209ENST00000463244 CCNYQ8ND76 341 aa20.37■□□□□ 0.85
CPSF7-209ENST00000463244 NAP1L5Q96NT1 182 aaPredicted RBP20.37■□□□□ 0.85
CPSF7-209ENST00000463244 NAT10Q9H0A0 1025 aaKnown RBP20.37■□□□□ 0.85
CPSF7-209ENST00000463244 ACTL8Q9H568 366 aa20.37■□□□□ 0.85
CPSF7-209ENST00000463244 MAGEE1Q9HCI5 957 aa20.37■□□□□ 0.85
CPSF7-209ENST00000463244 SEMA5BQ9P283 1151 aa20.37■□□□□ 0.85
CPSF7-209ENST00000463244 VPS4AQ9UN37 437 aa20.37■□□□□ 0.85
CPSF7-209ENST00000463244 BZW2Q9Y6E2 419 aaKnown RBP20.37■□□□□ 0.85
CPSF7-209ENST00000463244 CELSR2Q9HCU4 2923 aa20.37■□□□□ 0.85
CPSF7-209ENST00000463244 DOPEY1Q5JWR5 2465 aa20.36■□□□□ 0.85
CPSF7-209ENST00000463244 TTLL8A6PVC2 850 aa20.36■□□□□ 0.85
CPSF7-209ENST00000463244 VEGFDO43915 354 aa20.36■□□□□ 0.85
CPSF7-209ENST00000463244 PIRTP0C851 137 aa20.36■□□□□ 0.85
CPSF7-209ENST00000463244 IDSP22304 550 aa20.36■□□□□ 0.85
CPSF7-209ENST00000463244 DRG2P55039 364 aaKnown RBP20.36■□□□□ 0.85
CPSF7-209ENST00000463244 IFI35P80217 286 aaPredicted RBP20.36■□□□□ 0.85
CPSF7-209ENST00000463244 PPIDQ08752 370 aaKnown RBP20.36■□□□□ 0.85
CPSF7-209ENST00000463244 KHDC1Q4VXA5 237 aaKnown RBP20.36■□□□□ 0.85
CPSF7-209ENST00000463244 FIGNQ5HY92 759 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms