RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 LAMB3Q13751 1172 aa10.67□□□□□ -0.7
CBX3-205ENST00000462165 INSCQ1MX18 579 aa10.67□□□□□ -0.7
CBX3-205ENST00000462165 CPZQ66K79 652 aa10.67□□□□□ -0.7
CBX3-205ENST00000462165 TIGD7Q6NT04 549 aaPredicted RBP10.67□□□□□ -0.7
CBX3-205ENST00000462165 ABRAXAS1Q6UWZ7 409 aa10.67□□□□□ -0.7
CBX3-205ENST00000462165 ADGRG6Q86SQ4 1221 aa10.67□□□□□ -0.7
CBX3-205ENST00000462165 SYVN1Q86TM6 617 aa10.67□□□□□ -0.7
CBX3-205ENST00000462165 RBM12BQ8IXT5 1001 aaKnown RBP10.67□□□□□ -0.7
CBX3-205ENST00000462165 ARRDC2Q8TBH0 407 aa10.67□□□□□ -0.7
CBX3-205ENST00000462165 FATE1Q969F0 183 aa10.67□□□□□ -0.7
CBX3-205ENST00000462165 ZDHHC12Q96GR4 267 aa10.67□□□□□ -0.7
CBX3-205ENST00000462165 RUFY1Q96T51 708 aa10.67□□□□□ -0.7
CBX3-205ENST00000462165 TIMM29Q9BSF4 260 aa10.67□□□□□ -0.7
CBX3-205ENST00000462165 MLPHQ9BV36 600 aaPredicted RBP10.67□□□□□ -0.7
CBX3-205ENST00000462165 OR2AG1Q9H205 316 aa10.67□□□□□ -0.7
CBX3-205ENST00000462165 AKIRIN1Q9H9L7 192 aaPredicted RBP10.67□□□□□ -0.7
CBX3-205ENST00000462165 MRPL47Q9HD33 250 aaKnown RBP10.67□□□□□ -0.7
CBX3-205ENST00000462165 PDE7BQ9NP56 450 aa10.67□□□□□ -0.7
CBX3-205ENST00000462165 HAUS2Q9NVX0 235 aa10.67□□□□□ -0.7
CBX3-205ENST00000462165 SLC23A2Q9UGH3 650 aa10.67□□□□□ -0.7
CBX3-205ENST00000462165 WIPF3A6NGB9 483 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 ANKRD66B4E2M5 251 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 KMOO15229 486 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 MFSD11O43934 449 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 SLC25A14O95258 325 aaPredicted RBP10.66□□□□□ -0.7
CBX3-205ENST00000462165 BRAFP15056 766 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 ZNF7P17097 686 aaPredicted RBP10.66□□□□□ -0.7
CBX3-205ENST00000462165 IL4RP24394 825 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 CCNCP24863 283 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 CCL11P51671 97 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 RPS18P62269 152 aaKnown RBP10.66□□□□□ -0.7
CBX3-205ENST00000462165 NIPAL4Q0D2K0 466 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 GALNT2Q10471 571 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 GPR18Q14330 331 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 INPP5JQ15735 1006 aaPredicted RBP10.66□□□□□ -0.7
CBX3-205ENST00000462165 CHRNA6Q15825 494 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 QPCTQ16769 361 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 EIF2S3LQ2VIR3 472 aaKnown RBP10.66□□□□□ -0.7
CBX3-205ENST00000462165 PLA2G4EQ3MJ16 856 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 TDRD12Q587J7 1177 aaKnown RBP10.66□□□□□ -0.7
CBX3-205ENST00000462165 ZNF569Q5MCW4 686 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 ZNF648Q5T619 568 aaPredicted RBP10.66□□□□□ -0.7
CBX3-205ENST00000462165 ZNF787Q6DD87 383 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 TXNRD3NBQ6F5E7 133 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 PWWP2BQ6NUJ5 590 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 IRGCQ6NXR0 463 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 FAM199XQ6PEV8 388 aaPredicted RBP10.66□□□□□ -0.7
CBX3-205ENST00000462165 WASH2PQ6VEQ5 465 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 FAM92BQ6ZTR7 304 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 APTXQ7Z2E3 356 aaKnown RBP10.66□□□□□ -0.7
CBX3-205ENST00000462165 MAMDC2Q7Z304 686 aaPredicted RBP10.66□□□□□ -0.7
CBX3-205ENST00000462165 LRRTM4Q86VH4 590 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 BPHLQ86WA6 291 aaPredicted RBP10.66□□□□□ -0.7
CBX3-205ENST00000462165 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.66□□□□□ -0.7
CBX3-205ENST00000462165 SIDT2Q8NBJ9 832 aaKnown RBP10.66□□□□□ -0.7
CBX3-205ENST00000462165 FAM71BQ8TC56 605 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 ZNF653Q96CK0 615 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 EID2BQ96D98 161 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 TRIM11Q96F44 468 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 SLC41A2Q96JW4 573 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 ZSCAN5AQ9BUG6 496 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 SLC29A3Q9BZD2 475 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 ING2Q9H160 280 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 SLC40A1Q9NP59 571 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 ARFGAP3Q9NP61 516 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 CASS4Q9NQ75 786 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 WASH6PQ9NQA3 447 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 ACSS2Q9NR19 701 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 RBM22Q9NW64 420 aaKnown RBP eCLIP10.66□□□□□ -0.76e-8■■■□□ 18.4
CBX3-205ENST00000462165 NFKBIL1Q9UBC1 381 aaPredicted RBP10.66□□□□□ -0.7
CBX3-205ENST00000462165 MYO1AQ9UBC5 1043 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 RARRES3Q9UL19 164 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 ZNF451Q9Y4E5 1061 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 TTLL3Q9Y4R7 772 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 DOPEY1Q5JWR5 2465 aa10.66□□□□□ -0.7
CBX3-205ENST00000462165 IGHV5-51A0A0C4DH38 117 aa10.65□□□□□ -0.7
CBX3-205ENST00000462165 ARGFXA6NJG6 315 aa10.65□□□□□ -0.7
CBX3-205ENST00000462165 OR52A4PA6NMU1 304 aa10.65□□□□□ -0.7
CBX3-205ENST00000462165 PDZK1P1A8MUH7 402 aa10.65□□□□□ -0.7
CBX3-205ENST00000462165 TCP11X1B4DZS4 312 aa10.65□□□□□ -0.7
CBX3-205ENST00000462165 CEACAM4O75871 244 aa10.65□□□□□ -0.7
CBX3-205ENST00000462165 JCHAINP01591 159 aa10.65□□□□□ -0.7
CBX3-205ENST00000462165 HLA-DQB2P05538 268 aa10.65□□□□□ -0.7
CBX3-205ENST00000462165 MYBL1P10243 752 aa10.65□□□□□ -0.7
CBX3-205ENST00000462165 HOXB1P14653 301 aaPredicted RBP10.65□□□□□ -0.7
CBX3-205ENST00000462165 FOLR1P15328 257 aa10.65□□□□□ -0.7
CBX3-205ENST00000462165 LPOP22079 712 aaPredicted RBP10.65□□□□□ -0.7
CBX3-205ENST00000462165 VARSP26640 1264 aaKnown RBP10.65□□□□□ -0.7
CBX3-205ENST00000462165 DCDC1P59894 354 aa10.65□□□□□ -0.7
CBX3-205ENST00000462165 RPS15P62841 145 aaKnown RBP10.65□□□□□ -0.7
CBX3-205ENST00000462165 SLC25A11Q02978 314 aaKnown RBP10.65□□□□□ -0.7
CBX3-205ENST00000462165 CHAF1BQ13112 559 aa10.65□□□□□ -0.7
CBX3-205ENST00000462165 MRPL49Q13405 166 aaKnown RBP10.65□□□□□ -0.7
CBX3-205ENST00000462165 TUBB3Q13509 450 aa10.65□□□□□ -0.7
CBX3-205ENST00000462165 IL10RAQ13651 578 aa10.65□□□□□ -0.7
CBX3-205ENST00000462165 PIGHQ14442 188 aaPredicted RBP10.65□□□□□ -0.7
CBX3-205ENST00000462165 PAFAH1B3Q15102 231 aaKnown RBP10.65□□□□□ -0.7
CBX3-205ENST00000462165 SEPT7Q16181 437 aaKnown RBP10.65□□□□□ -0.7
CBX3-205ENST00000462165 IFI16Q16666 785 aaKnown RBP10.65□□□□□ -0.7
CBX3-205ENST00000462165 AGAP9Q5VTM2 703 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms