RNA–Protein interactions for RNA: ENST00000461219.5

SCAF8-204, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-204ENST00000461219 SLC37A2Q8TED4 501 aa20.21■□□□□ 0.83
SCAF8-204ENST00000461219 SH3KBP1Q96B97 665 aa20.21■□□□□ 0.83
SCAF8-204ENST00000461219 DNAJC1Q96KC8 554 aaKnown RBP20.21■□□□□ 0.83
SCAF8-204ENST00000461219 TIMM29Q9BSF4 260 aa20.21■□□□□ 0.83
SCAF8-204ENST00000461219 TBC1D29Q9UFV1 150 aa20.21■□□□□ 0.83
SCAF8-204ENST00000461219 ATXN7L1Q9ULK2 861 aaPredicted RBP20.21■□□□□ 0.83
SCAF8-204ENST00000461219 ENTPD2Q9Y5L3 495 aa20.21■□□□□ 0.83
SCAF8-204ENST00000461219 PIKFYVEQ9Y2I7 2098 aa20.21■□□□□ 0.83
SCAF8-204ENST00000461219 IGF2RP11717 2491 aa20.21■□□□□ 0.83
SCAF8-204ENST00000461219 KIR2DS5A0A0G2JLQ3 304 aa20.2■□□□□ 0.82
SCAF8-204ENST00000461219 A0A0G2JNG1 304 aa20.2■□□□□ 0.82
SCAF8-204ENST00000461219 CCDC78A2IDD5 438 aa20.2■□□□□ 0.82
SCAF8-204ENST00000461219 OR2AG2A6NM03 316 aa20.2■□□□□ 0.82
SCAF8-204ENST00000461219 KIR2DS3K7RE56 304 aa20.2■□□□□ 0.82
SCAF8-204ENST00000461219 NTN3O00634 580 aaPredicted RBP20.2■□□□□ 0.82
SCAF8-204ENST00000461219 BRINP1O60477 761 aa20.2■□□□□ 0.82
SCAF8-204ENST00000461219 IDSP22304 550 aa20.2■□□□□ 0.82
SCAF8-204ENST00000461219 RBMS1P29558 406 aaKnown RBP20.2■□□□□ 0.82
SCAF8-204ENST00000461219 MC4RP32245 332 aa20.2■□□□□ 0.82
SCAF8-204ENST00000461219 GPR3P46089 330 aa20.2■□□□□ 0.82
SCAF8-204ENST00000461219 INHBCP55103 352 aa20.2■□□□□ 0.82
SCAF8-204ENST00000461219 KIR2DS5Q14953 304 aa20.2■□□□□ 0.82
SCAF8-204ENST00000461219 RTP5Q14D33 572 aa20.2■□□□□ 0.82
SCAF8-204ENST00000461219 SIX1Q15475 284 aaPredicted RBP20.2■□□□□ 0.82
SCAF8-204ENST00000461219 KHDC1Q4VXA5 237 aaKnown RBP20.2■□□□□ 0.82
SCAF8-204ENST00000461219 PHF19Q5T6S3 580 aa20.2■□□□□ 0.82
SCAF8-204ENST00000461219 TMEM220Q6QAJ8 160 aa20.2■□□□□ 0.82
SCAF8-204ENST00000461219 DET1Q7L5Y6 550 aa20.2■□□□□ 0.82
SCAF8-204ENST00000461219 TAS2R42Q7RTR8 314 aa20.2■□□□□ 0.82
SCAF8-204ENST00000461219 KLHDC8BQ8IXV7 354 aa20.2■□□□□ 0.82
SCAF8-204ENST00000461219 STYXQ8WUJ0 223 aa20.2■□□□□ 0.82
SCAF8-204ENST00000461219 ZNF514Q96K75 400 aaPredicted RBP20.2■□□□□ 0.82
SCAF8-204ENST00000461219 FOXP3Q9BZS1 431 aa20.2■□□□□ 0.82
SCAF8-204ENST00000461219 POLR1BQ9H9Y6 1135 aa20.2■□□□□ 0.82
SCAF8-204ENST00000461219 PRDM8Q9NQV8 689 aa20.2■□□□□ 0.82
SCAF8-204ENST00000461219 SMOXQ9NWM0 555 aa20.2■□□□□ 0.82
SCAF8-204ENST00000461219 AKAP7Q9P0M2 348 aaPredicted RBP20.2■□□□□ 0.82
SCAF8-204ENST00000461219 DKK4Q9UBT3 224 aa20.2■□□□□ 0.82
SCAF8-204ENST00000461219 TMPRSS11EQ9UL52 423 aa20.2■□□□□ 0.82
SCAF8-204ENST00000461219 SATB2Q9UPW6 733 aa20.2■□□□□ 0.82
SCAF8-204ENST00000461219 ACACAQ13085 2346 aa20.19■□□□□ 0.82
SCAF8-204ENST00000461219 GOLGA6L10A0A0M3HER8 536 aa20.19■□□□□ 0.82
SCAF8-204ENST00000461219 A0A1W2PQM1 296 aa20.19■□□□□ 0.82
SCAF8-204ENST00000461219 PGRMC1O00264 195 aaKnown RBP20.19■□□□□ 0.82
SCAF8-204ENST00000461219 CCL22O00626 93 aa20.19■□□□□ 0.82
SCAF8-204ENST00000461219 LDB2O43679 373 aa20.19■□□□□ 0.82
SCAF8-204ENST00000461219 CPNE6O95741 557 aa20.19■□□□□ 0.82
SCAF8-204ENST00000461219 ZSCAN5DPP0CG00 497 aa20.19■□□□□ 0.82
SCAF8-204ENST00000461219 HALP42357 657 aa20.19■□□□□ 0.82
SCAF8-204ENST00000461219 MAPK9P45984 424 aa20.19■□□□□ 0.82
SCAF8-204ENST00000461219 KCNJ1P48048 391 aa20.19■□□□□ 0.82
SCAF8-204ENST00000461219 CLCNKAP51800 687 aa20.19■□□□□ 0.82
SCAF8-204ENST00000461219 SKIDA1Q1XH10 827 aa20.19■□□□□ 0.82
SCAF8-204ENST00000461219 FNBP1LQ5T0N5 605 aa20.19■□□□□ 0.82
SCAF8-204ENST00000461219 SNX20Q7Z614 316 aa20.19■□□□□ 0.82
SCAF8-204ENST00000461219 AMZ2Q86W34 360 aa20.19■□□□□ 0.82
SCAF8-204ENST00000461219 C17orf82Q86X59 251 aaPredicted RBP20.19■□□□□ 0.82
SCAF8-204ENST00000461219 SFRP1Q8N474 314 aa20.19■□□□□ 0.82
SCAF8-204ENST00000461219 RASGEF1AQ8N9B8 481 aa20.19■□□□□ 0.82
SCAF8-204ENST00000461219 OR10G6Q8NH81 332 aa20.19■□□□□ 0.82
SCAF8-204ENST00000461219 WDR36Q8NI36 951 aaKnown RBP20.19■□□□□ 0.82
SCAF8-204ENST00000461219 MAGOHBQ96A72 148 aaKnown RBP20.19■□□□□ 0.82
SCAF8-204ENST00000461219 DCBLD2Q96PD2 775 aa20.19■□□□□ 0.82
SCAF8-204ENST00000461219 C19orf43Q9BQ61 176 aa20.19■□□□□ 0.82
SCAF8-204ENST00000461219 FAM96AQ9H5X1 160 aa20.19■□□□□ 0.82
SCAF8-204ENST00000461219 CCDC187A0A096LP49 1063 aa20.18■□□□□ 0.82
SCAF8-204ENST00000461219 HEATR9A2RTY3 570 aa20.18■□□□□ 0.82
SCAF8-204ENST00000461219 GAPDHSO14556 408 aaPredicted RBP20.18■□□□□ 0.82
SCAF8-204ENST00000461219 CASC3O15234 703 aaKnown RBP20.18■□□□□ 0.82
SCAF8-204ENST00000461219 PPM1DO15297 605 aa20.18■□□□□ 0.82
SCAF8-204ENST00000461219 KCNJ13O60928 360 aa20.18■□□□□ 0.82
SCAF8-204ENST00000461219 VIPP01282 170 aa20.18■□□□□ 0.82
SCAF8-204ENST00000461219 RPL10P27635 214 aaKnown RBP20.18■□□□□ 0.82
SCAF8-204ENST00000461219 RPL22P35268 128 aaKnown RBP20.18■□□□□ 0.82
SCAF8-204ENST00000461219 FASLGP48023 281 aa20.18■□□□□ 0.82
SCAF8-204ENST00000461219 SEMA5AQ13591 1074 aa20.18■□□□□ 0.82
SCAF8-204ENST00000461219 GPR33Q49SQ1 333 aa20.18■□□□□ 0.82
SCAF8-204ENST00000461219 CCDC38Q502W7 563 aa20.18■□□□□ 0.82
SCAF8-204ENST00000461219 IYDQ6PHW0 289 aa20.18■□□□□ 0.82
SCAF8-204ENST00000461219 USP53Q70EK8 1073 aa20.18■□□□□ 0.82
SCAF8-204ENST00000461219 ZNF438Q7Z4V0 828 aa20.18■□□□□ 0.82
SCAF8-204ENST00000461219 ZNF761Q86XN6 746 aaPredicted RBP20.18■□□□□ 0.82
SCAF8-204ENST00000461219 PPHLN1Q8NEY8 458 aaKnown RBP20.18■□□□□ 0.82
SCAF8-204ENST00000461219 HEXDCQ8WVB3 486 aa20.18■□□□□ 0.82
SCAF8-204ENST00000461219 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.18■□□□□ 0.82
SCAF8-204ENST00000461219 CXorf40BQ96DE9 158 aa20.18■□□□□ 0.82
SCAF8-204ENST00000461219 MS4A14Q96JA4 679 aa20.18■□□□□ 0.82
SCAF8-204ENST00000461219 COPS8Q99627 209 aa20.18■□□□□ 0.82
SCAF8-204ENST00000461219 AP1M1Q9BXS5 423 aa20.18■□□□□ 0.82
SCAF8-204ENST00000461219 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.18■□□□□ 0.82
SCAF8-204ENST00000461219 RDH14Q9HBH5 336 aa20.18■□□□□ 0.82
SCAF8-204ENST00000461219 SARS2Q9NP81 518 aaKnown RBP20.18■□□□□ 0.82
SCAF8-204ENST00000461219 NLE1Q9NVX2 485 aaPredicted RBP20.18■□□□□ 0.82
SCAF8-204ENST00000461219 FAM8A1Q9UBU6 413 aa20.18■□□□□ 0.82
SCAF8-204ENST00000461219 SLC23A2Q9UGH3 650 aa20.18■□□□□ 0.82
SCAF8-204ENST00000461219 SRRM3A6NNA2 597 aaPredicted RBP20.17■□□□□ 0.82
SCAF8-204ENST00000461219 AGRPO00253 132 aa20.17■□□□□ 0.82
SCAF8-204ENST00000461219 DUX1O43812 170 aa20.17■□□□□ 0.82
SCAF8-204ENST00000461219 POP7O75817 140 aaKnown RBP20.17■□□□□ 0.82
SCAF8-204ENST00000461219 EML2O95834 649 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms