RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 TUBA1CQ9BQE3 449 aa10.31□□□□□ -0.76
HERC4-207ENST00000460168 ATP13A3Q9H7F0 1226 aa10.31□□□□□ -0.76
HERC4-207ENST00000460168 ZFP14Q9HCL3 533 aa10.31□□□□□ -0.76
HERC4-207ENST00000460168 GGT7Q9UJ14 662 aa10.31□□□□□ -0.76
HERC4-207ENST00000460168 ARHGAP10A1A4S6 786 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 EPN2O95208 641 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 PIGNO95427 931 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 APBB3O95704 486 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 RETP07949 1114 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 SERPINA4P29622 427 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 GKP32189 559 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 KRT20P35900 424 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 NNMTP40261 264 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 SLC1A2P43004 574 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 WDR4P57081 412 aaKnown RBP10.3□□□□□ -0.76
HERC4-207ENST00000460168 RAC1P63000 192 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 KDSRQ06136 332 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 SQLEQ14534 574 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 LIN52Q52LA3 116 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 ATAT1Q5SQI0 421 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 SHEQ5VZ18 495 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 MBLAC2Q68D91 279 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 FAM122CQ6P4D5 195 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 KLHL35Q6PF15 583 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 ADIPOR2Q86V24 386 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 SPATA24Q86W54 205 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 OR13C4Q8NGS5 318 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 STYXQ8WUJ0 223 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 NAT14Q8WUY8 206 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 CHMP6Q96FZ7 201 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 MYO19Q96H55 970 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 CEP19Q96LK0 163 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 FAM111AQ96PZ2 611 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 CIPCQ9C0C6 399 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 C12orf65Q9H3J6 166 aaKnown RBP10.3□□□□□ -0.76
HERC4-207ENST00000460168 RHOJQ9H4E5 214 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 CCDC134Q9H6E4 229 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 THG1LQ9NWX6 298 aaKnown RBP10.3□□□□□ -0.76
HERC4-207ENST00000460168 SLC17A7Q9P2U7 560 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 CDH7Q9ULB5 785 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 CENPBD1B2RD01 187 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 AURKAO14965 403 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 SLC7A4O43246 635 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 ZNF821O75541 412 aaPredicted RBP10.3□□□□□ -0.76
HERC4-207ENST00000460168 AHSGP02765 367 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 ARSAP15289 507 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 GRIA4P48058 902 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 GSSP48637 474 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 CSNK1DP48730 415 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 ARSDP51689 593 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 NUBP1P53384 320 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 MPP1Q00013 466 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 LRRC74AQ0VAA2 488 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 ITGA9Q13797 1035 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 PTPRCAPQ14761 206 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 TAF1AQ15573 450 aaPredicted RBP10.3□□□□□ -0.76
HERC4-207ENST00000460168 DLG2Q15700 870 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 GEN1Q17RS7 908 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 TMEM215Q68D42 235 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 ZC3HC1Q86WB0 502 aaKnown RBP10.3□□□□□ -0.76
HERC4-207ENST00000460168 C2CD4AQ8NCU7 369 aaPredicted RBP10.3□□□□□ -0.76
HERC4-207ENST00000460168 MDGA1Q8NFP4 955 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 CKAP2Q8WWK9 683 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 ISG20Q96AZ6 181 aaKnown RBP10.3□□□□□ -0.76
HERC4-207ENST00000460168 SEC16BQ96JE7 1060 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 TBATAQ96M53 351 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 MAGEB18Q96M61 343 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 SMIM14Q96QK8 99 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 UNKQ9C0B0 810 aaKnown RBP10.3□□□□□ -0.76
HERC4-207ENST00000460168 IFT22Q9H7X7 185 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 BRD9Q9H8M2 597 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 SNX15Q9NRS6 342 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 HECAQ9UBI9 543 aaPredicted RBP10.3□□□□□ -0.76
HERC4-207ENST00000460168 KCNN3Q9UGI6 736 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 SLCO3A1Q9UIG8 710 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 FBXO5Q9UKT4 447 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 MTO1Q9Y2Z2 717 aaKnown RBP10.3□□□□□ -0.76
HERC4-207ENST00000460168 PRKAB1Q9Y478 270 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 PCDHGA11Q9Y5H2 935 aa10.3□□□□□ -0.76
HERC4-207ENST00000460168 OR51F1A6NGY5 319 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 OR6C65A6NJZ3 312 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 HOXC11O43248 304 aaPredicted RBP10.29□□□□□ -0.76
HERC4-207ENST00000460168 FZD6O60353 706 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 SOCS5O75159 536 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 SIN3BO75182 1162 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 RPP40O75818 363 aaKnown RBP10.29□□□□□ -0.76
HERC4-207ENST00000460168 INMTO95050 263 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 KLHL2O95198 593 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 PGLSO95336 258 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 KRT6AP02538 564 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 KRT6BP04259 564 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 PABPC4LP0CB38 370 aaKnown RBP10.29□□□□□ -0.76
HERC4-207ENST00000460168 ZNF16P17020 682 aaPredicted RBP10.29□□□□□ -0.76
HERC4-207ENST00000460168 SAT1P21673 171 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 SERPINB3P29508 390 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 RECQLP46063 649 aaPredicted RBP10.29□□□□□ -0.76
HERC4-207ENST00000460168 KRT6CP48668 564 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 NEK3P51956 506 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 PPP2R2BQ00005 443 aa10.29□□□□□ -0.76
HERC4-207ENST00000460168 RAD51Q06609 339 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms