RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 RSC1A1Q92681 617 aa7.77□□□□□ -1.17
HPS4-207ENST00000459918 CLIP3Q96DZ5 547 aa7.77□□□□□ -1.17
HPS4-207ENST00000459918 COX14Q96I36 57 aa7.77□□□□□ -1.17
HPS4-207ENST00000459918 PEBP4Q96S96 227 aa7.77□□□□□ -1.17
HPS4-207ENST00000459918 SPATA16Q9BXB7 569 aa7.77□□□□□ -1.17
HPS4-207ENST00000459918 OR2AG1Q9H205 316 aa7.77□□□□□ -1.17
HPS4-207ENST00000459918 CARD9Q9H257 536 aa7.77□□□□□ -1.17
HPS4-207ENST00000459918 FAM83DQ9H4H8 585 aa7.77□□□□□ -1.17
HPS4-207ENST00000459918 SAMSN1Q9NSI8 373 aaKnown RBP7.77□□□□□ -1.17
HPS4-207ENST00000459918 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.77□□□□□ -1.17
HPS4-207ENST00000459918 SOHLH2Q9NX45 425 aa7.77□□□□□ -1.17
HPS4-207ENST00000459918 GPR83Q9NYM4 423 aa7.77□□□□□ -1.17
HPS4-207ENST00000459918 CWC15Q9P013 229 aaKnown RBP7.77□□□□□ -1.17
HPS4-207ENST00000459918 CHKBQ9Y259 395 aa7.77□□□□□ -1.17
HPS4-207ENST00000459918 MED13Q9UHV7 2174 aa7.77□□□□□ -1.17
HPS4-207ENST00000459918 ANKUB1A6NFN9 424 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 OR52A4PA6NMU1 304 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 FADS2P1A8MWK0 482 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 EPHB6O15197 1021 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 KMOO15229 486 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 NUAK1O60285 661 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 TIAF1O95411 115 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 RECKO95980 971 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 LDLRP01130 860 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 EBLN1P0CF75 366 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 ZNF8P17098 575 aaPredicted RBP7.76□□□□□ -1.17
HPS4-207ENST00000459918 NELFEP18615 380 aaKnown RBP7.76□□□□□ -1.17
HPS4-207ENST00000459918 XRCC1P18887 633 aaPredicted RBP7.76□□□□□ -1.17
HPS4-207ENST00000459918 IDSP22304 550 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 AMPD1P23109 780 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 MIPP30301 263 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 SSR1P43307 286 aaKnown RBP7.76□□□□□ -1.17
HPS4-207ENST00000459918 ZNF165P49910 485 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 RRADP55042 308 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 RIPPLY3P57055 190 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 UBE2IP63279 158 aaKnown RBP7.76□□□□□ -1.17
HPS4-207ENST00000459918 GTF2H3Q13889 308 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 DPYSQ14117 519 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 KRT81Q14533 505 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 ZRANB3Q5FWF4 1079 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 DNTTIP2Q5QJE6 756 aaKnown RBP7.76□□□□□ -1.17
HPS4-207ENST00000459918 TMTC4Q5T4D3 741 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 ZNF648Q5T619 568 aaPredicted RBP7.76□□□□□ -1.17
HPS4-207ENST00000459918 LYPLAL1Q5VWZ2 237 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 HGSNATQ68CP4 663 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 SLC6A19Q695T7 634 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 ACAD10Q6JQN1 1059 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 ARMC6Q6NXE6 501 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 PPP1R2P3Q6NXS1 205 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 KLHL35Q6PF15 583 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 LRRTM4Q86VH4 590 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 HPS6Q86YV9 775 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 TRAPPC5Q8IUR0 188 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 MCOLN2Q8IZK6 566 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 AOPEPQ8N6M6 819 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 TTC13Q8NBP0 860 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 FDCSPQ8NFU4 85 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 GDAP1Q8TB36 358 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 UBXN4Q92575 508 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 PNPLA2Q96AD5 504 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 TCTN2Q96GX1 697 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 SGSM3Q96HU1 749 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 TDRD1Q9BXT4 1180 aaKnown RBP7.76□□□□□ -1.17
HPS4-207ENST00000459918 UCK1Q9HA47 277 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 FANCEQ9HB96 536 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 PCDH9Q9HC56 1237 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 WASH6PQ9NQA3 447 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 FGF21Q9NSA1 209 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 RYDENQ9NUL5 291 aaKnown RBP7.76□□□□□ -1.17
HPS4-207ENST00000459918 POT1Q9NUX5 634 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 OGFRQ9NZT2 677 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 ATXN10Q9UBB4 475 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 MYO1AQ9UBC5 1043 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 FARSAQ9Y285 508 aaKnown RBP7.76□□□□□ -1.17
HPS4-207ENST00000459918 PCDHGB7Q9Y5F8 929 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 SLC30A1Q9Y6M5 507 aa7.76□□□□□ -1.17
HPS4-207ENST00000459918 DOPEY1Q5JWR5 2465 aa7.75□□□□□ -1.17
HPS4-207ENST00000459918 TCRBV5S1A1TA0A578 114 aa7.75□□□□□ -1.17
HPS4-207ENST00000459918 MAFKO60675 156 aa7.75□□□□□ -1.17
HPS4-207ENST00000459918 ALPPP05187 535 aa7.75□□□□□ -1.17
HPS4-207ENST00000459918 FOLR1P15328 257 aa7.75□□□□□ -1.17
HPS4-207ENST00000459918 FERP16591 822 aa7.75□□□□□ -1.17
HPS4-207ENST00000459918 HCAR3P49019 387 aa7.75□□□□□ -1.17
HPS4-207ENST00000459918 SPINT3P49223 89 aa7.75□□□□□ -1.17
HPS4-207ENST00000459918 PER3P56645 1201 aa7.75□□□□□ -1.17
HPS4-207ENST00000459918 PPP1CAP62136 330 aa7.75□□□□□ -1.17
HPS4-207ENST00000459918 DSC2Q02487 901 aa7.75□□□□□ -1.17
HPS4-207ENST00000459918 MAMLD1Q13495 774 aa7.75□□□□□ -1.17
HPS4-207ENST00000459918 CCDC122Q5T0U0 273 aa7.75□□□□□ -1.17
HPS4-207ENST00000459918 C1QL3Q5VWW1 255 aa7.75□□□□□ -1.17
HPS4-207ENST00000459918 TIGD7Q6NT04 549 aaPredicted RBP7.75□□□□□ -1.17
HPS4-207ENST00000459918 NLRP8Q86W28 1048 aa7.75□□□□□ -1.17
HPS4-207ENST00000459918 BPHLQ86WA6 291 aaPredicted RBP7.75□□□□□ -1.17
HPS4-207ENST00000459918 TICAM1Q8IUC6 712 aa7.75□□□□□ -1.17
HPS4-207ENST00000459918 PSTKQ8IV42 348 aaKnown RBP7.75□□□□□ -1.17
HPS4-207ENST00000459918 RBM12BQ8IXT5 1001 aaKnown RBP7.75□□□□□ -1.17
HPS4-207ENST00000459918 CBARPQ8N350 705 aaPredicted RBP7.75□□□□□ -1.17
HPS4-207ENST00000459918 CISD2Q8N5K1 135 aaKnown RBP7.75□□□□□ -1.17
HPS4-207ENST00000459918 ENDOVQ8N8Q3 282 aaKnown RBP7.75□□□□□ -1.17
HPS4-207ENST00000459918 SNRNP40Q96DI7 357 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms