RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 B3GNT8Q7Z7M8 397 aa17.29■□□□□ 0.36
SCARNA2-201ENST00000458748 CLEC14AQ86T13 490 aa17.29■□□□□ 0.36
SCARNA2-201ENST00000458748 SLC13A5Q86YT5 568 aaPredicted RBP17.29■□□□□ 0.36
SCARNA2-201ENST00000458748 TRAPPC5Q8IUR0 188 aa17.29■□□□□ 0.36
SCARNA2-201ENST00000458748 SLC37A2Q8TED4 501 aa17.29■□□□□ 0.36
SCARNA2-201ENST00000458748 ZNF514Q96K75 400 aaPredicted RBP17.29■□□□□ 0.36
SCARNA2-201ENST00000458748 TMEM121Q9BTD3 319 aa17.29■□□□□ 0.36
SCARNA2-201ENST00000458748 DPH1Q9BZG8 443 aa17.29■□□□□ 0.36
SCARNA2-201ENST00000458748 EPB41L1Q9H4G0 881 aa17.29■□□□□ 0.36
SCARNA2-201ENST00000458748 ARNT2Q9HBZ2 717 aa17.29■□□□□ 0.36
SCARNA2-201ENST00000458748 ARFGAP3Q9NP61 516 aa17.29■□□□□ 0.36
SCARNA2-201ENST00000458748 SARS2Q9NP81 518 aaKnown RBP17.29■□□□□ 0.36
SCARNA2-201ENST00000458748 SMOXQ9NWM0 555 aa17.29■□□□□ 0.36
SCARNA2-201ENST00000458748 TBC1D29Q9UFV1 150 aa17.29■□□□□ 0.36
SCARNA2-201ENST00000458748 ZNF148Q9UQR1 794 aa17.29■□□□□ 0.36
SCARNA2-201ENST00000458748 B4GAT1O43505 415 aa17.28■□□□□ 0.36
SCARNA2-201ENST00000458748 DUX1O43812 170 aa17.28■□□□□ 0.36
SCARNA2-201ENST00000458748 TNFSF15O95150 251 aa17.28■□□□□ 0.36
SCARNA2-201ENST00000458748 PRAMEF1O95521 474 aa17.28■□□□□ 0.36
SCARNA2-201ENST00000458748 RALBP11234 206 aa17.28■□□□□ 0.36
SCARNA2-201ENST00000458748 MSH3P20585 1137 aa17.28■□□□□ 0.36
SCARNA2-201ENST00000458748 IDSP22304 550 aa17.28■□□□□ 0.36
SCARNA2-201ENST00000458748 CCDC173Q0VFZ6 552 aa17.28■□□□□ 0.36
SCARNA2-201ENST00000458748 SQSTM1Q13501 440 aa17.28■□□□□ 0.36
SCARNA2-201ENST00000458748 CHRNA6Q15825 494 aa17.28■□□□□ 0.36
SCARNA2-201ENST00000458748 PHF19Q5T6S3 580 aa17.28■□□□□ 0.36
SCARNA2-201ENST00000458748 TRIM48Q8IWZ4 208 aa17.28■□□□□ 0.36
SCARNA2-201ENST00000458748 DDHD1Q8NEL9 900 aa17.28■□□□□ 0.36
SCARNA2-201ENST00000458748 ZNF398Q8TD17 642 aa17.28■□□□□ 0.36
SCARNA2-201ENST00000458748 HEXDCQ8WVB3 486 aa17.28■□□□□ 0.36
SCARNA2-201ENST00000458748 PATE1Q8WXA2 126 aa17.28■□□□□ 0.36
SCARNA2-201ENST00000458748 ANP32BQ92688 251 aaKnown RBP17.28■□□□□ 0.36
SCARNA2-201ENST00000458748 ULK4Q96C45 1275 aa17.28■□□□□ 0.36
SCARNA2-201ENST00000458748 APOL2Q9BQE5 337 aa17.28■□□□□ 0.36
SCARNA2-201ENST00000458748 GORASP1Q9BQQ3 440 aa17.28■□□□□ 0.36
SCARNA2-201ENST00000458748 FOXP3Q9BZS1 431 aa17.28■□□□□ 0.36
SCARNA2-201ENST00000458748 ATXN7L1Q9ULK2 861 aaPredicted RBP17.28■□□□□ 0.36
SCARNA2-201ENST00000458748 ZKSCAN5Q9Y2L8 839 aa17.28■□□□□ 0.36
SCARNA2-201ENST00000458748 ARL5AQ9Y689 179 aa17.28■□□□□ 0.36
SCARNA2-201ENST00000458748 DNMT3AQ9Y6K1 912 aaPredicted RBP17.28■□□□□ 0.36
SCARNA2-201ENST00000458748 PTPRQQ9UMZ3 2332 aa17.28■□□□□ 0.36
SCARNA2-201ENST00000458748 KLHL33A6NCF5 533 aa17.27■□□□□ 0.36
SCARNA2-201ENST00000458748 E7EVH7 732 aa17.27■□□□□ 0.36
SCARNA2-201ENST00000458748 PPM1DO15297 605 aa17.27■□□□□ 0.36
SCARNA2-201ENST00000458748 AKT1P31749 480 aa17.27■□□□□ 0.36
SCARNA2-201ENST00000458748 LMAN1P49257 510 aa17.27■□□□□ 0.36
SCARNA2-201ENST00000458748 EPHA4P54764 986 aa17.27■□□□□ 0.36
SCARNA2-201ENST00000458748 UCNP55089 124 aa17.27■□□□□ 0.36
SCARNA2-201ENST00000458748 TLE3Q04726 772 aa17.27■□□□□ 0.36
SCARNA2-201ENST00000458748 TRA2AQ13595 282 aaKnown RBP eCLIP17.27■□□□□ 0.36
SCARNA2-201ENST00000458748 LAMB3Q13751 1172 aa17.27■□□□□ 0.36
SCARNA2-201ENST00000458748 LONRF2Q1L5Z9 754 aa17.27■□□□□ 0.36
SCARNA2-201ENST00000458748 ZNF648Q5T619 568 aaPredicted RBP17.27■□□□□ 0.36
SCARNA2-201ENST00000458748 BROXQ5VW32 411 aa17.27■□□□□ 0.36
SCARNA2-201ENST00000458748 SPACA3Q8IXA5 215 aa17.27■□□□□ 0.36
SCARNA2-201ENST00000458748 KLHDC8BQ8IXV7 354 aa17.27■□□□□ 0.36
SCARNA2-201ENST00000458748 CCDC89Q8N998 374 aa17.27■□□□□ 0.36
SCARNA2-201ENST00000458748 OR4K2Q8NGD2 314 aa17.27■□□□□ 0.36
SCARNA2-201ENST00000458748 OR4D9Q8NGE8 314 aa17.27■□□□□ 0.36
SCARNA2-201ENST00000458748 KCNE4Q8WWG9 221 aa17.27■□□□□ 0.36
SCARNA2-201ENST00000458748 RTP4Q96DX8 246 aa17.27■□□□□ 0.36
SCARNA2-201ENST00000458748 DCUN1D1Q96GG9 259 aa17.27■□□□□ 0.36
SCARNA2-201ENST00000458748 GRPEL1Q9HAV7 217 aa17.27■□□□□ 0.36
SCARNA2-201ENST00000458748 R3HDM2Q9Y2K5 976 aaKnown RBP17.27■□□□□ 0.36
SCARNA2-201ENST00000458748 BPTFQ12830 3046 aa17.26■□□□□ 0.35
SCARNA2-201ENST00000458748 TRBV23OR9-2A0A075B6M9 112 aa17.26■□□□□ 0.35
SCARNA2-201ENST00000458748 IGHV1OR21-1A0A087WYE8 117 aa17.26■□□□□ 0.35
SCARNA2-201ENST00000458748 GOLGA6L3A6NEY3 463 aa17.26■□□□□ 0.35
SCARNA2-201ENST00000458748 PDZK1P1A8MUH7 402 aa17.26■□□□□ 0.35
SCARNA2-201ENST00000458748 CFAP99D6REC4 459 aa17.26■□□□□ 0.35
SCARNA2-201ENST00000458748 HGSO14964 777 aaPredicted RBP17.26■□□□□ 0.35
SCARNA2-201ENST00000458748 BUD23O43709 281 aaKnown RBP17.26■□□□□ 0.35
SCARNA2-201ENST00000458748 LIASO43766 372 aa17.26■□□□□ 0.35
SCARNA2-201ENST00000458748 MTX2O75431 263 aa17.26■□□□□ 0.35
SCARNA2-201ENST00000458748 SRP72O76094 671 aaKnown RBP17.26■□□□□ 0.35
SCARNA2-201ENST00000458748 AP2A1O95782 977 aa17.26■□□□□ 0.35
SCARNA2-201ENST00000458748 ITGALP20701 1170 aa17.26■□□□□ 0.35
SCARNA2-201ENST00000458748 CD1CP29017 333 aa17.26■□□□□ 0.35
SCARNA2-201ENST00000458748 UGT1A5P35504 534 aa17.26■□□□□ 0.35
SCARNA2-201ENST00000458748 FDFT1P37268 417 aa17.26■□□□□ 0.35
SCARNA2-201ENST00000458748 HALP42357 657 aa17.26■□□□□ 0.35
SCARNA2-201ENST00000458748 PLA2G4EQ3MJ16 856 aa17.26■□□□□ 0.35
SCARNA2-201ENST00000458748 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.26■□□□□ 0.35
SCARNA2-201ENST00000458748 GPRC6AQ5T6X5 926 aa17.26■□□□□ 0.35
SCARNA2-201ENST00000458748 TMEM164Q5U3C3 297 aa17.26■□□□□ 0.35
SCARNA2-201ENST00000458748 USP53Q70EK8 1073 aa17.26■□□□□ 0.35
SCARNA2-201ENST00000458748 AMZ2Q86W34 360 aa17.26■□□□□ 0.35
SCARNA2-201ENST00000458748 SLITRK4Q8IW52 837 aa17.26■□□□□ 0.35
SCARNA2-201ENST00000458748 PRORYQ9H606 182 aa17.26■□□□□ 0.35
SCARNA2-201ENST00000458748 ASB8Q9H765 288 aa17.26■□□□□ 0.35
SCARNA2-201ENST00000458748 RDH14Q9HBH5 336 aa17.26■□□□□ 0.35
SCARNA2-201ENST00000458748 HOMER3Q9NSC5 361 aa17.26■□□□□ 0.35
SCARNA2-201ENST00000458748 CPNE7Q9UBL6 633 aa17.26■□□□□ 0.35
SCARNA2-201ENST00000458748 DNAJC16Q9Y2G8 782 aa17.26■□□□□ 0.35
SCARNA2-201ENST00000458748 PPP2R2CQ9Y2T4 447 aa17.26■□□□□ 0.35
SCARNA2-201ENST00000458748 LOXL2Q9Y4K0 774 aa17.26■□□□□ 0.35
SCARNA2-201ENST00000458748 PCDHGA7Q9Y5G6 932 aa17.26■□□□□ 0.35
SCARNA2-201ENST00000458748 TCRBV7S2A1N4TA0A589 114 aa17.25■□□□□ 0.35
SCARNA2-201ENST00000458748 A6NCN8 305 aa17.25■□□□□ 0.35
SCARNA2-201ENST00000458748 EIF4E1BA6NMX2 242 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms