RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 DCUN1D1Q96GG9 259 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 ZNF382Q96SR6 550 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 CCT7Q99832 543 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 HOPXQ9BPY8 73 aaPredicted RBP16.5■□□□□ 0.23
CCDC43-202ENST00000457422 HGH1Q9BTY7 390 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 COPS7BQ9H9Q2 264 aaPredicted RBP16.5■□□□□ 0.23
CCDC43-202ENST00000457422 PFDN4Q9NQP4 134 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 PLK2Q9NYY3 685 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 CFAP97Q9P2B7 532 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 ABCD2Q9UBJ2 740 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 GPR45Q9Y5Y3 372 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 ANKRD12Q6UB98 2062 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 CXorf51AA0A1B0GTR3 108 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 NR5A2O00482 541 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 CHEK2O96017 543 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 CKMP06732 381 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 ZNF7P17097 686 aaPredicted RBP16.5■□□□□ 0.23
CCDC43-202ENST00000457422 PRDX3P30048 256 aaKnown RBP16.5■□□□□ 0.23
CCDC43-202ENST00000457422 GKP32189 559 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 PPM1AP35813 382 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 RHDQ02161 417 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 RBBP7Q16576 425 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 CDKN3Q16667 212 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 C6orf10Q5SRN2 563 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 PRMT9Q6P2P2 845 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 FAM151BQ6UXP7 276 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 SNX20Q7Z614 316 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 ADAMTSL2Q86TH1 951 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 TMC8Q8IU68 726 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 BBS7Q8IWZ6 715 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 LRRC3Q9BY71 257 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 ZFYVE1Q9HBF4 777 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 CD274Q9NZQ7 290 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 PCDH10Q9P2E7 1040 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 MAP10Q9P2G4 905 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 EIF2B4Q9UI10 523 aaKnown RBP16.5■□□□□ 0.23
CCDC43-202ENST00000457422 CLEC4EQ9ULY5 219 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 TIMM22Q9Y584 194 aa16.5■□□□□ 0.23
CCDC43-202ENST00000457422 TRBV5-4A0A0C4DH59 114 aa16.49■□□□□ 0.23
CCDC43-202ENST00000457422 TCRBV3S1A0A5B6 114 aa16.49■□□□□ 0.23
CCDC43-202ENST00000457422 NRG2O14511 850 aaPredicted RBP16.49■□□□□ 0.23
CCDC43-202ENST00000457422 PRAMEF1O95521 474 aa16.49■□□□□ 0.23
CCDC43-202ENST00000457422 CAPN3P20807 821 aa16.49■□□□□ 0.23
CCDC43-202ENST00000457422 WDR5P61964 334 aaKnown RBP16.49■□□□□ 0.23
CCDC43-202ENST00000457422 LMAN2Q12907 356 aa16.49■□□□□ 0.23
CCDC43-202ENST00000457422 PCBP2Q15366 365 aaKnown RBP eCLIP16.49■□□□□ 0.23
CCDC43-202ENST00000457422 MPPE1Q53F39 396 aa16.49■□□□□ 0.23
CCDC43-202ENST00000457422 IRAK1BP1Q5VVH5 260 aa16.49■□□□□ 0.23
CCDC43-202ENST00000457422 GPRIN3Q6ZVF9 776 aa16.49■□□□□ 0.23
CCDC43-202ENST00000457422 SERPINA9Q86WD7 417 aa16.49■□□□□ 0.23
CCDC43-202ENST00000457422 RBFAQ8N0V3 343 aa16.49■□□□□ 0.23
CCDC43-202ENST00000457422 MINDY1Q8N5J2 469 aa16.49■□□□□ 0.23
CCDC43-202ENST00000457422 TMEM102Q8N9M5 508 aaPredicted RBP16.49■□□□□ 0.23
CCDC43-202ENST00000457422 FIBINQ8TAL6 211 aa16.49■□□□□ 0.23
CCDC43-202ENST00000457422 ESAMQ96AP7 390 aa16.49■□□□□ 0.23
CCDC43-202ENST00000457422 PLEKHG4BQ96PX9 1271 aa16.49■□□□□ 0.23
CCDC43-202ENST00000457422 TUBGCP5Q96RT8 1024 aa16.49■□□□□ 0.23
CCDC43-202ENST00000457422 PKP2Q99959 881 aa16.49■□□□□ 0.23
CCDC43-202ENST00000457422 PCDHAC1Q9H158 963 aa16.49■□□□□ 0.23
CCDC43-202ENST00000457422 SLC52A3Q9NQ40 469 aa16.49■□□□□ 0.23
CCDC43-202ENST00000457422 ABCB8Q9NUT2 735 aa16.49■□□□□ 0.23
CCDC43-202ENST00000457422 AIG1Q9NVV5 245 aa16.49■□□□□ 0.23
CCDC43-202ENST00000457422 KIAA1522Q9P206 1035 aaPredicted RBP16.49■□□□□ 0.23
CCDC43-202ENST00000457422 TSR3Q9UJK0 312 aaKnown RBP16.49■□□□□ 0.23
CCDC43-202ENST00000457422 APPL1Q9UKG1 709 aa16.49■□□□□ 0.23
CCDC43-202ENST00000457422 ASB1Q9Y576 335 aa16.49■□□□□ 0.23
CCDC43-202ENST00000457422 CAPN8A6NHC0 703 aa16.49■□□□□ 0.23
CCDC43-202ENST00000457422 GIPC1O14908 333 aa16.49■□□□□ 0.23
CCDC43-202ENST00000457422 TGM5O43548 720 aa16.49■□□□□ 0.23
CCDC43-202ENST00000457422 DENRO43583 198 aaKnown RBP16.49■□□□□ 0.23
CCDC43-202ENST00000457422 CYBBP04839 570 aa16.49■□□□□ 0.23
CCDC43-202ENST00000457422 CA5AP35218 305 aa16.49■□□□□ 0.23
CCDC43-202ENST00000457422 SLC7A2P52569 658 aa16.49■□□□□ 0.23
CCDC43-202ENST00000457422 BLOC1S3Q6QNY0 202 aa16.49■□□□□ 0.23
CCDC43-202ENST00000457422 BRINP2Q9C0B6 783 aa16.49■□□□□ 0.23
CCDC43-202ENST00000457422 CLPBQ9H078 707 aa16.49■□□□□ 0.23
CCDC43-202ENST00000457422 CRISPLD2Q9H0B8 497 aa16.49■□□□□ 0.23
CCDC43-202ENST00000457422 GNPTGQ9UJJ9 305 aa16.49■□□□□ 0.23
CCDC43-202ENST00000457422 CNOT11Q9UKZ1 510 aaKnown RBP16.49■□□□□ 0.23
CCDC43-202ENST00000457422 SH3BP1Q9Y3L3 701 aa16.49■□□□□ 0.23
CCDC43-202ENST00000457422 TNPO3Q9Y5L0 923 aaKnown RBP16.49■□□□□ 0.23
CCDC43-202ENST00000457422 ST14Q9Y5Y6 855 aa16.49■□□□□ 0.23
CCDC43-202ENST00000457422 HELZP42694 1942 aaKnown RBP16.48■□□□□ 0.23
CCDC43-202ENST00000457422 ANGPT2O15123 496 aa16.48■□□□□ 0.23
CCDC43-202ENST00000457422 KIF1CO43896 1103 aaKnown RBP16.48■□□□□ 0.23
CCDC43-202ENST00000457422 ZNF821O75541 412 aaPredicted RBP16.48■□□□□ 0.23
CCDC43-202ENST00000457422 IGSF6O95976 241 aa16.48■□□□□ 0.23
CCDC43-202ENST00000457422 CLTBP09497 229 aa16.48■□□□□ 0.23
CCDC43-202ENST00000457422 CNPP09543 421 aaKnown RBP16.48■□□□□ 0.23
CCDC43-202ENST00000457422 FOXM1Q08050 763 aa16.48■□□□□ 0.23
CCDC43-202ENST00000457422 NFATC2Q13469 925 aa16.48■□□□□ 0.23
CCDC43-202ENST00000457422 PLEKHG6Q3KR16 790 aa16.48■□□□□ 0.23
CCDC43-202ENST00000457422 LYPLAL1Q5VWZ2 237 aa16.48■□□□□ 0.23
CCDC43-202ENST00000457422 SBSNQ6UWP8 590 aa16.48■□□□□ 0.23
CCDC43-202ENST00000457422 TPGS1Q6ZTW0 290 aa16.48■□□□□ 0.23
CCDC43-202ENST00000457422 PIP4K2CQ8TBX8 421 aa16.48■□□□□ 0.23
CCDC43-202ENST00000457422 NAT14Q8WUY8 206 aa16.48■□□□□ 0.23
CCDC43-202ENST00000457422 ATP6V1E2Q96A05 226 aa16.48■□□□□ 0.23
CCDC43-202ENST00000457422 SLC39A3Q9BRY0 314 aa16.48■□□□□ 0.23
CCDC43-202ENST00000457422 ZBP1Q9H171 429 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms