RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 CCT4P50991 539 aaKnown RBP5.4□□□□□ -1.54
VPS41-209ENST00000457055 ATP5IP56385 69 aaPredicted RBP5.4□□□□□ -1.54
VPS41-209ENST00000457055 PSMC6P62333 389 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 TNFRSF17Q02223 184 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 FOXL1Q12952 345 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 DAG1Q14118 895 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 CAPRIN1Q14444 709 aaKnown RBP5.4□□□□□ -1.54
VPS41-209ENST00000457055 EIF4HQ15056 248 aaKnown RBP5.4□□□□□ -1.54
VPS41-209ENST00000457055 PCOLCEQ15113 449 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 EPHA7Q15375 998 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 SGCAQ16586 387 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 MEP1BQ16820 701 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 CDONQ4KMG0 1287 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 DNAL1Q4LDG9 190 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 NAA35Q5VZE5 725 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 MFSD5Q6N075 450 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 SCYL2Q6P3W7 929 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 FAM171BQ6P995 826 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 USP17L6PQ6QN14 398 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 MSANTD1Q6ZTZ1 278 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 TOM1L2Q6ZVM7 507 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 FAM131BQ86XD5 332 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 CMIPQ8IY22 773 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 ULK2Q8IYT8 1036 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 SFRP1Q8N474 314 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 C11orf65Q8NCR3 313 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 GPR156Q8NFN8 814 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 OR10Z1Q8NGY1 313 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 IL17DQ8TAD2 202 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 LIPHQ8WWY8 451 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 OR1E3Q8WZA6 343 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 CELF1Q92879 486 aaKnown RBP5.4□□□□□ -1.54
VPS41-209ENST00000457055 TNFRSF14Q92956 283 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 COA7Q96BR5 231 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 ELMO2Q96JJ3 720 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 ANKRD27Q96NW4 1050 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 RIT2Q99578 217 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 CGRRF1Q99675 332 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 RBM4BQ9BQ04 359 aaKnown RBP5.4□□□□□ -1.54
VPS41-209ENST00000457055 TPPP3Q9BW30 176 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 RBM4Q9BWF3 364 aaKnown RBP5.4□□□□□ -1.54
VPS41-209ENST00000457055 MRPL1Q9BYD6 325 aaKnown RBP5.4□□□□□ -1.54
VPS41-209ENST00000457055 OR10A2Q9H208 303 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 SEPSECSQ9HD40 501 aaKnown RBP5.4□□□□□ -1.54
VPS41-209ENST00000457055 PIH1D3Q9NQM4 214 aaKnown RBP5.4□□□□□ -1.54
VPS41-209ENST00000457055 TLR9Q9NR96 1032 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 TBC1D23Q9NUY8 699 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 TRNAU1APQ9NX07 287 aaKnown RBP5.4□□□□□ -1.54
VPS41-209ENST00000457055 RHBDL2Q9NX52 303 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 ZSCAN32Q9NX65 697 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 KLHL28Q9NXS3 571 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 ANKMY1Q9P2S6 941 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 C11orf21Q9P2W6 132 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 SLC9A8Q9Y2E8 581 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 PHLPP2Q6ZVD8 1323 aa5.4□□□□□ -1.55
VPS41-209ENST00000457055 ARHGEF10O15013 1369 aa5.4□□□□□ -1.55
VPS41-209ENST00000457055 RGPD5Q99666 1765 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 BTAF1O14981 1849 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 KIF1BO60333 1816 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 PAPPAQ13219 1627 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 A0A0G2JNJ9 132 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 URADA6NGE7 173 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 ARGFXA6NJG6 315 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 ZNF716A6NP11 495 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 IQCF5A8MTL0 148 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 PSMD11O00231 422 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 SOCS6O14544 535 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 SMAD9O15198 467 aaKnown RBP5.39□□□□□ -1.55
VPS41-209ENST00000457055 PRPF4O43172 522 aaKnown RBP eCLIP5.39□□□□□ -1.55
VPS41-209ENST00000457055 STX10O60499 249 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 PFDN1O60925 122 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 DNAJB6O75190 326 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 PRDM1O75626 825 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 RPP40O75818 363 aaKnown RBP5.39□□□□□ -1.55
VPS41-209ENST00000457055 FAM155BO75949 473 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 KRT36O76013 467 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 SEMA3DO95025 777 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 MPIG6BO95866 241 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 AK1P00568 194 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 KRT6AP02538 564 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 KRT6BP04259 564 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 TUBB4AP04350 444 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 CLEC3BP05452 202 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 RPS17P08708 135 aaKnown RBP5.39□□□□□ -1.55
VPS41-209ENST00000457055 GSTA2P09210 222 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 ZNF735P0CB33 412 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 CPA1P15085 419 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 VCLP18206 1134 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 TCN1P20061 433 aaPredicted RBP5.39□□□□□ -1.55
VPS41-209ENST00000457055 CYP2A7P20853 494 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 CALB2P22676 271 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 TGM1P22735 817 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 HOXC8P31273 242 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 SLC5A2P31639 672 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 HIBADHP31937 336 aaKnown RBP5.39□□□□□ -1.55
VPS41-209ENST00000457055 CHRNA3P32297 505 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 CTNNB1P35222 781 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 SPAM1P38567 509 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 ARHGAP25P42331 645 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 SLC11A1P49279 550 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms