RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 TPP2P29144 1249 aaPredicted RBP12.32□□□□□ -0.44
LINC00959-201ENST00000456581 TUFMP49411 452 aaKnown RBP12.32□□□□□ -0.44
LINC00959-201ENST00000456581 HK2P52789 917 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 PRMT2P55345 433 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 TIAL1Q01085 375 aaKnown RBP eCLIP12.32□□□□□ -0.44
LINC00959-201ENST00000456581 NEDD8Q15843 81 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 ZIK1Q3SY52 487 aaPredicted RBP12.32□□□□□ -0.44
LINC00959-201ENST00000456581 PARP15Q460N3 678 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 LDLRAP1Q5SW96 308 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 TXNDC8Q6A555 127 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 KIAA0930Q6ICG6 404 aaPredicted RBP12.32□□□□□ -0.44
LINC00959-201ENST00000456581 C8orf82Q6P1X6 216 aaPredicted RBP12.32□□□□□ -0.44
LINC00959-201ENST00000456581 LYSMD3Q7Z3D4 306 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 TMEM150AQ86TG1 271 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 TUBGCP3Q96CW5 907 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 TMEM169Q96HH4 297 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 ADI1Q9BV57 179 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 ANKRD60Q9BZ19 345 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 CLK4Q9HAZ1 481 aaKnown RBP12.32□□□□□ -0.44
LINC00959-201ENST00000456581 ARNT2Q9HBZ2 717 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 ZNF334Q9HCZ1 680 aaPredicted RBP12.32□□□□□ -0.44
LINC00959-201ENST00000456581 AFF4Q9UHB7 1163 aaKnown RBP12.32□□□□□ -0.44
LINC00959-201ENST00000456581 SARDHQ9UL12 918 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 AGO1Q9UL18 857 aaKnown RBP12.32□□□□□ -0.44
LINC00959-201ENST00000456581 CORINQ9Y5Q5 1042 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 MYO9BQ13459 2157 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 DHRS12A0PJE2 317 aa12.31□□□□□ -0.44
LINC00959-201ENST00000456581 PRRG1O14668 218 aa12.31□□□□□ -0.44
LINC00959-201ENST00000456581 KCNH1O95259 989 aa12.31□□□□□ -0.44
LINC00959-201ENST00000456581 MLLT10P55197 1068 aa12.31□□□□□ -0.44
LINC00959-201ENST00000456581 CREB5Q02930 508 aa12.31□□□□□ -0.44
LINC00959-201ENST00000456581 PIGFQ07326 219 aa12.31□□□□□ -0.44
LINC00959-201ENST00000456581 ERMP1Q7Z2K6 904 aa12.31□□□□□ -0.44
LINC00959-201ENST00000456581 TWIST2Q8WVJ9 160 aa12.31□□□□□ -0.44
LINC00959-201ENST00000456581 TOP1MTQ969P6 601 aa12.31□□□□□ -0.44
LINC00959-201ENST00000456581 HAUS8Q9BT25 410 aa12.31□□□□□ -0.44
LINC00959-201ENST00000456581 POLR1EQ9GZS1 481 aaKnown RBP12.31□□□□□ -0.44
LINC00959-201ENST00000456581 EML4Q9HC35 981 aaKnown RBP12.31□□□□□ -0.44
LINC00959-201ENST00000456581 TRPM5Q9NZQ8 1165 aa12.31□□□□□ -0.44
LINC00959-201ENST00000456581 FAM50BQ9Y247 325 aa12.31□□□□□ -0.44
LINC00959-201ENST00000456581 ANKRD36A6QL64 1941 aa12.31□□□□□ -0.44
LINC00959-201ENST00000456581 ABLIM3O94929 683 aa12.31□□□□□ -0.44
LINC00959-201ENST00000456581 SNAP29O95721 258 aa12.31□□□□□ -0.44
LINC00959-201ENST00000456581 S1PR4O95977 384 aa12.31□□□□□ -0.44
LINC00959-201ENST00000456581 SOD2P04179 222 aa12.31□□□□□ -0.44
LINC00959-201ENST00000456581 HGFP14210 728 aa12.31□□□□□ -0.44
LINC00959-201ENST00000456581 GJA1P17302 382 aa12.31□□□□□ -0.44
LINC00959-201ENST00000456581 PSMD8P48556 350 aa12.31□□□□□ -0.44
LINC00959-201ENST00000456581 AGTR2P50052 363 aa12.31□□□□□ -0.44
LINC00959-201ENST00000456581 BTG3Q14201 252 aaPredicted RBP12.31□□□□□ -0.44
LINC00959-201ENST00000456581 OTOP2Q7RTS6 562 aa12.31□□□□□ -0.44
LINC00959-201ENST00000456581 DNAJB7Q7Z6W7 309 aaPredicted RBP12.31□□□□□ -0.44
LINC00959-201ENST00000456581 FNDC8Q8TC99 324 aa12.31□□□□□ -0.44
LINC00959-201ENST00000456581 MAGEE2Q8TD90 523 aaPredicted RBP12.31□□□□□ -0.44
LINC00959-201ENST00000456581 TCF12Q99081 682 aa12.31□□□□□ -0.44
LINC00959-201ENST00000456581 ACOX2Q99424 681 aa12.31□□□□□ -0.44
LINC00959-201ENST00000456581 ZBED2Q9BTP6 218 aa12.31□□□□□ -0.44
LINC00959-201ENST00000456581 PAIP1Q9H074 479 aaKnown RBP12.31□□□□□ -0.44
LINC00959-201ENST00000456581 CNOT11Q9UKZ1 510 aaKnown RBP12.31□□□□□ -0.44
LINC00959-201ENST00000456581 FAF1Q9UNN5 650 aaPredicted RBP12.31□□□□□ -0.44
LINC00959-201ENST00000456581 PCDHGC4Q9Y5F7 938 aa12.31□□□□□ -0.44
LINC00959-201ENST00000456581 LOC285095A0A1B0GVY8 99 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 ARPC2O15144 300 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 IMPDH1P20839 514 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 SLC6A2P23975 617 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 SLC11A2P49281 568 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 STX1BP61266 288 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 SMARCB1Q12824 385 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 CYP51A1Q16850 503 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 AARS2Q5JTZ9 985 aaKnown RBP12.3□□□□□ -0.44
LINC00959-201ENST00000456581 PAGE3Q5JUK9 113 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 OTUD3Q5T2D3 398 aaPredicted RBP12.3□□□□□ -0.44
LINC00959-201ENST00000456581 PPP4R4Q6NUP7 873 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 BTLAQ7Z6A9 289 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 ERI1Q8IV48 349 aaKnown RBP12.3□□□□□ -0.44
LINC00959-201ENST00000456581 ARL14EPQ8N8R7 260 aaPredicted RBP12.3□□□□□ -0.44
LINC00959-201ENST00000456581 WFDC5Q8TCV5 224 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 GIPC3Q8TF64 312 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 C2orf15Q8WU43 125 aaKnown RBP12.3□□□□□ -0.44
LINC00959-201ENST00000456581 PPP1R2P1Q96PQ5 205 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 PLEKHG4BQ96PX9 1271 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 VPS45Q9NRW7 570 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 ASB1Q9Y576 335 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 SPO11Q9Y5K1 396 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 BACE2Q9Y5Z0 518 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 ASPDHA6ND91 283 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 MROH6A6NGR9 719 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 PCNAP12004 261 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 MZF1P28698 734 aaPredicted RBP12.3□□□□□ -0.44
LINC00959-201ENST00000456581 LEPRP48357 1165 aaKnown RBP12.3□□□□□ -0.44
LINC00959-201ENST00000456581 MAPKAPK2P49137 400 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 YBEYP58557 167 aaPredicted RBP12.3□□□□□ -0.44
LINC00959-201ENST00000456581 LRRC26Q2I0M4 334 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 FAM45BPQ6NSW5 357 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 BORAQ6PGQ7 559 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 GPR141Q7Z602 305 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 SLC39A11Q8N1S5 342 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 KLHL23Q8NBE8 558 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 FAM45AQ8TCE6 357 aa12.3□□□□□ -0.44
LINC00959-201ENST00000456581 PTCD2Q8WV60 388 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms