RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 LOXL4Q96JB6 756 aa11.12□□□□□ -0.63
TRAF4-206ENST00000454852 VPS39Q96JC1 886 aa11.12□□□□□ -0.63
TRAF4-206ENST00000454852 LGR4Q9BXB1 951 aa11.12□□□□□ -0.63
TRAF4-206ENST00000454852 CLPBQ9H078 707 aa11.12□□□□□ -0.63
TRAF4-206ENST00000454852 FBXO6Q9NRD1 293 aaPredicted RBP11.12□□□□□ -0.63
TRAF4-206ENST00000454852 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.12□□□□□ -0.63
TRAF4-206ENST00000454852 SLC17A6Q9P2U8 582 aa11.12□□□□□ -0.63
TRAF4-206ENST00000454852 SUSD2Q9UGT4 822 aa11.12□□□□□ -0.63
TRAF4-206ENST00000454852 EIF2B4Q9UI10 523 aaKnown RBP11.12□□□□□ -0.63
TRAF4-206ENST00000454852 MED16Q9Y2X0 877 aa11.12□□□□□ -0.63
TRAF4-206ENST00000454852 OAS3Q9Y6K5 1087 aaKnown RBP11.12□□□□□ -0.63
TRAF4-206ENST00000454852 IKBKGQ9Y6K9 419 aa11.12□□□□□ -0.63
TRAF4-206ENST00000454852 ABCA7Q8IZY2 2146 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 SPTY2D1-AS1A0A0U1RR47 76 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 IQANK1A0A1B0GTG1 560 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 C17orf113A0A1B0GUU1 675 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 POC1B-GALNT4F8VUJ3 575 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 VILLO15195 856 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 INPP4BO15327 924 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 OR1I1O60431 355 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 KCNJ13O60928 360 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 DNAJC6O75061 913 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 PIAS1O75925 651 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 KRT37O76014 449 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 WISP3O95389 354 aaPredicted RBP11.11□□□□□ -0.63
TRAF4-206ENST00000454852 CEACAM5P06731 702 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 ITGA2BP08514 1039 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 HTR1BP28222 390 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 CD38P28907 300 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 PRLHRP49683 370 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 CLDN2P57739 230 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 POU4F1Q01851 419 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 IFFO1Q0D2I5 559 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 SRSF5Q13243 272 aaKnown RBP11.11□□□□□ -0.63
TRAF4-206ENST00000454852 PTK2BQ14289 1009 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 ZKSCAN8Q15776 578 aaPredicted RBP11.11□□□□□ -0.63
TRAF4-206ENST00000454852 CTSL3PQ5NE16 218 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 FAM45BPQ6NSW5 357 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 ZC3H14Q6PJT7 736 aaKnown RBP11.11□□□□□ -0.63
TRAF4-206ENST00000454852 Q6ZSR6 202 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 TAOK1Q7L7X3 1001 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 CCDC91Q7Z6B0 441 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 SLC22A18ASQ8N1D0 253 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 PNPLA1Q8N8W4 532 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 RASGEF1AQ8N9B8 481 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 OR2W6PQ8NHA6 318 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 FAM45AQ8TCE6 357 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 PGM2Q96G03 612 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 DCUN1D1Q96GG9 259 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 WDR92Q96MX6 357 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 SLC6A18Q96N87 628 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 AARSD1Q9BTE6 412 aaKnown RBP11.11□□□□□ -0.63
TRAF4-206ENST00000454852 BOCQ9BWV1 1114 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 KCNH6Q9H252 994 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 POPDC3Q9HBV1 291 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 TM9SF3Q9HD45 589 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 ZNF446Q9NWS9 450 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 ATXN10Q9UBB4 475 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 GNPTGQ9UJJ9 305 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 PILRBQ9UKJ0 227 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 OR1A2Q9Y585 309 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 SLCO1B1Q9Y6L6 691 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 DGKBQ9Y6T7 804 aa11.11□□□□□ -0.63
TRAF4-206ENST00000454852 THADAQ6YHU6 1953 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 A0A1B0GTW7 788 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 FAM95CA0A1B0GW59 222 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 TMEM202A6NGA9 273 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 PRR19A6NJB7 356 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 H0Y8X5 98 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 AGPSO00116 658 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 BCAT2O15382 392 aaPredicted RBP11.1□□□□□ -0.63
TRAF4-206ENST00000454852 SASH3O75995 380 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 CDK14O94921 469 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 WNT1P04628 370 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 SNRPAP09012 282 aaKnown RBP11.1□□□□□ -0.63
TRAF4-206ENST00000454852 OR56A5P0C7T3 313 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 THEGLP0DJG4 465 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 ZNF8P17098 575 aaPredicted RBP11.1□□□□□ -0.63
TRAF4-206ENST00000454852 FDXRP22570 491 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 AKT1P31749 480 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 SKIV2L2P42285 1042 aaKnown RBP11.1□□□□□ -0.63
TRAF4-206ENST00000454852 AFF3P51826 1226 aaKnown RBP11.1□□□□□ -0.63
TRAF4-206ENST00000454852 CTSCP53634 463 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 TIAL1Q01085 375 aaKnown RBP eCLIP11.1□□□□□ -0.637e-6■■□□□ 11.9
TRAF4-206ENST00000454852 GTF2H3Q13889 308 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 SIM2Q14190 667 aaPredicted RBP11.1□□□□□ -0.63
TRAF4-206ENST00000454852 SMAD1Q15797 465 aaKnown RBP11.1□□□□□ -0.63
TRAF4-206ENST00000454852 ZNF658BQ4V348 819 aaPredicted RBP11.1□□□□□ -0.63
TRAF4-206ENST00000454852 TPRG1LQ5T0D9 272 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 RABEPKQ7Z6M1 372 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 C11orf96Q7Z7L8 435 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 SYT12Q8IV01 421 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 ZNF547Q8IVP9 402 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 OXR1Q8N573 874 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 CLDN19Q8N6F1 224 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 OR13H1Q8NG92 308 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 OR56A4Q8NGH8 313 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 GDAP1Q8TB36 358 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 EPS8L3Q8TE67 593 aaKnown RBP11.1□□□□□ -0.63
TRAF4-206ENST00000454852 SNX19Q92543 992 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms