RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 SERPINI1Q99574 410 aa13.52□□□□□ -0.24
CLK3-203ENST00000454830 BRD9Q9H8M2 597 aa13.52□□□□□ -0.24
CLK3-203ENST00000454830 TBC1D14Q9P2M4 693 aa13.52□□□□□ -0.24
CLK3-203ENST00000454830 PRSS21Q9Y6M0 314 aa13.52□□□□□ -0.24
CLK3-203ENST00000454830 CHD5Q8TDI0 1954 aa13.52□□□□□ -0.25
CLK3-203ENST00000454830 CAPN8A6NHC0 703 aa13.52□□□□□ -0.25
CLK3-203ENST00000454830 HSPA14Q0VDF9 509 aa13.52□□□□□ -0.25
CLK3-203ENST00000454830 C18orf21Q32NC0 220 aaPredicted RBP13.52□□□□□ -0.25
CLK3-203ENST00000454830 MAP7D1Q3KQU3 841 aa13.52□□□□□ -0.25
CLK3-203ENST00000454830 ELMSAN1Q6PJG2 1045 aa13.52□□□□□ -0.25
CLK3-203ENST00000454830 CRTC1Q6UUV9 634 aa13.52□□□□□ -0.25
CLK3-203ENST00000454830 BNC2Q6ZN30 1099 aaPredicted RBP13.52□□□□□ -0.25
CLK3-203ENST00000454830 GPR26Q8NDV2 337 aa13.52□□□□□ -0.25
CLK3-203ENST00000454830 C1orf21Q9H246 121 aa13.52□□□□□ -0.25
CLK3-203ENST00000454830 WDR41Q9HAD4 459 aa13.52□□□□□ -0.25
CLK3-203ENST00000454830 B4GALT6Q9UBX8 382 aa13.52□□□□□ -0.25
CLK3-203ENST00000454830 TTC34A8MYJ7 566 aa13.52□□□□□ -0.25
CLK3-203ENST00000454830 TBX10O75333 385 aa13.52□□□□□ -0.25
CLK3-203ENST00000454830 LINC00271P0C7V0 271 aa13.52□□□□□ -0.25
CLK3-203ENST00000454830 RAP1GDS1P52306 607 aa13.52□□□□□ -0.25
CLK3-203ENST00000454830 ST8SIA6P61647 398 aa13.52□□□□□ -0.25
CLK3-203ENST00000454830 CREB5Q02930 508 aa13.52□□□□□ -0.25
CLK3-203ENST00000454830 LCP2Q13094 533 aa13.52□□□□□ -0.25
CLK3-203ENST00000454830 BOP1Q14137 746 aaKnown RBP13.52□□□□□ -0.25
CLK3-203ENST00000454830 SETMARQ53H47 684 aaPredicted RBP13.52□□□□□ -0.25
CLK3-203ENST00000454830 EP400NLQ6ZTU2 488 aa13.52□□□□□ -0.25
CLK3-203ENST00000454830 FAM217AQ8IXS0 508 aa13.52□□□□□ -0.25
CLK3-203ENST00000454830 ITFG1Q8TB96 612 aa13.52□□□□□ -0.25
CLK3-203ENST00000454830 L3HYPDHQ96EM0 354 aa13.52□□□□□ -0.25
CLK3-203ENST00000454830 ACOX2Q99424 681 aa13.52□□□□□ -0.25
CLK3-203ENST00000454830 WWOXQ9NZC7 414 aa13.52□□□□□ -0.25
CLK3-203ENST00000454830 ZMYM5Q9UJ78 669 aa13.52□□□□□ -0.25
CLK3-203ENST00000454830 ANGPTL2Q9UKU9 493 aa13.52□□□□□ -0.25
CLK3-203ENST00000454830 RPL26L1Q9UNX3 145 aaKnown RBP13.52□□□□□ -0.25
CLK3-203ENST00000454830 PCDHB1Q9Y5F3 818 aa13.52□□□□□ -0.25
CLK3-203ENST00000454830 NR5A2O00482 541 aa13.51□□□□□ -0.25
CLK3-203ENST00000454830 KPNA3O00505 521 aaPredicted RBP13.51□□□□□ -0.25
CLK3-203ENST00000454830 CCNT2O60583 730 aaKnown RBP13.51□□□□□ -0.25
CLK3-203ENST00000454830 ARHGEF15O94989 841 aa13.51□□□□□ -0.25
CLK3-203ENST00000454830 HGFP14210 728 aa13.51□□□□□ -0.25
CLK3-203ENST00000454830 PRDX3P30048 256 aaKnown RBP13.51□□□□□ -0.25
CLK3-203ENST00000454830 CA5AP35218 305 aa13.51□□□□□ -0.25
CLK3-203ENST00000454830 SUOXP51687 545 aa13.51□□□□□ -0.25
CLK3-203ENST00000454830 ARSIQ5FYB1 569 aa13.51□□□□□ -0.25
CLK3-203ENST00000454830 TPRG1Q6ZUI0 275 aa13.51□□□□□ -0.25
CLK3-203ENST00000454830 C3orf30Q96M34 536 aa13.51□□□□□ -0.25
CLK3-203ENST00000454830 COPS8Q99627 209 aa13.51□□□□□ -0.25
CLK3-203ENST00000454830 AKTIPQ9H8T0 292 aa13.51□□□□□ -0.25
CLK3-203ENST00000454830 ZBTB26Q9HCK0 441 aa13.51□□□□□ -0.25
CLK3-203ENST00000454830 DUS2Q9NX74 493 aaKnown RBP13.51□□□□□ -0.25
CLK3-203ENST00000454830 NDE1Q9NXR1 346 aa13.51□□□□□ -0.25
CLK3-203ENST00000454830 DNAJC15Q9Y5T4 150 aa13.51□□□□□ -0.25
CLK3-203ENST00000454830 CHD7Q9P2D1 2997 aa13.51□□□□□ -0.25
CLK3-203ENST00000454830 FGF19O95750 216 aa13.51□□□□□ -0.25
CLK3-203ENST00000454830 SLC34A1Q06495 639 aa13.51□□□□□ -0.25
CLK3-203ENST00000454830 GPM6BQ13491 265 aa13.51□□□□□ -0.25
CLK3-203ENST00000454830 SGO1Q5FBB7 561 aa13.51□□□□□ -0.25
CLK3-203ENST00000454830 FAM109BQ6ICB4 259 aaPredicted RBP13.51□□□□□ -0.25
CLK3-203ENST00000454830 PAOXQ6QHF9 649 aa13.51□□□□□ -0.25
CLK3-203ENST00000454830 LKAAEAR1Q8TD35 194 aa13.51□□□□□ -0.25
CLK3-203ENST00000454830 DCUN1D1Q96GG9 259 aa13.51□□□□□ -0.25
CLK3-203ENST00000454830 RANBP2P49792 3224 aaKnown RBP13.51□□□□□ -0.25
CLK3-203ENST00000454830 GFRA2O00451 464 aa13.51□□□□□ -0.25
CLK3-203ENST00000454830 HTRA2O43464 458 aaPredicted RBP13.51□□□□□ -0.25
CLK3-203ENST00000454830 SNUPNO95149 360 aaKnown RBP13.51□□□□□ -0.25
CLK3-203ENST00000454830 RPL26P61254 145 aaKnown RBP13.51□□□□□ -0.25
CLK3-203ENST00000454830 TGFBIQ15582 683 aa13.51□□□□□ -0.25
CLK3-203ENST00000454830 ADGRG2Q8IZP9 1017 aa13.51□□□□□ -0.25
CLK3-203ENST00000454830 FAM156AQ8NDB6 213 aa13.51□□□□□ -0.25
CLK3-203ENST00000454830 OR56A4Q8NGH8 313 aa13.51□□□□□ -0.25
CLK3-203ENST00000454830 IRAK3Q9Y616 596 aa13.51□□□□□ -0.25
CLK3-203ENST00000454830 A0A1B0GTL3 188 aa13.5□□□□□ -0.25
CLK3-203ENST00000454830 OR4F21O95013 312 aa13.5□□□□□ -0.25
CLK3-203ENST00000454830 DDX6P26196 483 aaKnown RBP eCLIP13.5□□□□□ -0.25
CLK3-203ENST00000454830 HSPA7P48741 367 aa13.5□□□□□ -0.25
CLK3-203ENST00000454830 GDPD4Q6W3E5 623 aa13.5□□□□□ -0.25
CLK3-203ENST00000454830 CACUL1Q86Y37 369 aa13.5□□□□□ -0.25
CLK3-203ENST00000454830 SCAMP4Q969E2 229 aa13.5□□□□□ -0.25
CLK3-203ENST00000454830 ASB2Q96Q27 587 aa13.5□□□□□ -0.25
CLK3-203ENST00000454830 C1orf50Q9BV19 199 aa13.5□□□□□ -0.25
CLK3-203ENST00000454830 DHRS7Q9Y394 339 aa13.5□□□□□ -0.25
CLK3-203ENST00000454830 ZNF197O14709 1029 aa13.5□□□□□ -0.25
CLK3-203ENST00000454830 RAD51BO15315 384 aa13.5□□□□□ -0.25
CLK3-203ENST00000454830 NVLO15381 856 aaKnown RBP13.5□□□□□ -0.25
CLK3-203ENST00000454830 MOSPD3O75425 235 aa13.5□□□□□ -0.25
CLK3-203ENST00000454830 ZNF821O75541 412 aaPredicted RBP13.5□□□□□ -0.25
CLK3-203ENST00000454830 WISP3O95389 354 aaPredicted RBP13.5□□□□□ -0.25
CLK3-203ENST00000454830 PRDX6P30041 224 aa13.5□□□□□ -0.25
CLK3-203ENST00000454830 PIK3CGP48736 1102 aa13.5□□□□□ -0.25
CLK3-203ENST00000454830 POLR2LP62875 67 aaKnown RBP13.5□□□□□ -0.25
CLK3-203ENST00000454830 SQLEQ14534 574 aa13.5□□□□□ -0.25
CLK3-203ENST00000454830 ATP13A5Q4VNC0 1218 aa13.5□□□□□ -0.25
CLK3-203ENST00000454830 TCEAL5Q5H9L2 206 aa13.5□□□□□ -0.25
CLK3-203ENST00000454830 ADAMTSL2Q86TH1 951 aa13.5□□□□□ -0.25
CLK3-203ENST00000454830 METTL6Q8TCB7 284 aa13.5□□□□□ -0.25
CLK3-203ENST00000454830 ACTRT2Q8TDY3 377 aa13.5□□□□□ -0.25
CLK3-203ENST00000454830 FAM126AQ9BYI3 521 aaPredicted RBP13.5□□□□□ -0.25
CLK3-203ENST00000454830 NOL11Q9H8H0 719 aaKnown RBP13.5□□□□□ -0.25
CLK3-203ENST00000454830 POMPQ9Y244 141 aa13.5□□□□□ -0.25
CLK3-203ENST00000454830 H7C0S8 307 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms