RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 DNALI1O14645 258 aaPredicted RBP17.85■□□□□ 0.45
SQSTM1-204ENST00000453046 ZSCAN5DPP0CG00 497 aa17.85■□□□□ 0.45
SQSTM1-204ENST00000453046 ETS1P14921 441 aa17.85■□□□□ 0.45
SQSTM1-204ENST00000453046 PTPN3P26045 913 aa17.85■□□□□ 0.45
SQSTM1-204ENST00000453046 ALDH4A1P30038 563 aa17.85■□□□□ 0.45
SQSTM1-204ENST00000453046 CCKBRP32239 447 aa17.85■□□□□ 0.45
SQSTM1-204ENST00000453046 RPL22P35268 128 aaKnown RBP17.85■□□□□ 0.45
SQSTM1-204ENST00000453046 UGT1A5P35504 534 aa17.85■□□□□ 0.45
SQSTM1-204ENST00000453046 ACTR1BP42025 376 aa17.85■□□□□ 0.45
SQSTM1-204ENST00000453046 ACTR1AP61163 376 aa17.85■□□□□ 0.45
SQSTM1-204ENST00000453046 SKOR1P84550 965 aa17.85■□□□□ 0.45
SQSTM1-204ENST00000453046 CAV1Q03135 178 aa17.85■□□□□ 0.45
SQSTM1-204ENST00000453046 AMZ1Q400G9 498 aa17.85■□□□□ 0.45
SQSTM1-204ENST00000453046 MAP9Q49MG5 647 aa17.85■□□□□ 0.45
SQSTM1-204ENST00000453046 ITPRIPL1Q6GPH6 555 aa17.85■□□□□ 0.45
SQSTM1-204ENST00000453046 ARHGEF18Q6ZSZ5 1173 aa17.85■□□□□ 0.45
SQSTM1-204ENST00000453046 GALNT13Q8IUC8 556 aa17.85■□□□□ 0.45
SQSTM1-204ENST00000453046 RAVER1Q8IY67 606 aaKnown RBP17.85■□□□□ 0.45
SQSTM1-204ENST00000453046 CCDC110Q8TBZ0 833 aa17.85■□□□□ 0.45
SQSTM1-204ENST00000453046 LYSMD1Q96S90 227 aa17.85■□□□□ 0.45
SQSTM1-204ENST00000453046 CEP41Q9BYV8 373 aa17.85■□□□□ 0.45
SQSTM1-204ENST00000453046 GRHL1Q9NZI5 618 aa17.85■□□□□ 0.45
SQSTM1-204ENST00000453046 KLHL8Q9P2G9 620 aaPredicted RBP17.85■□□□□ 0.45
SQSTM1-204ENST00000453046 TRHDEQ9UKU6 1024 aa17.85■□□□□ 0.45
SQSTM1-204ENST00000453046 SHOC2Q9UQ13 582 aa17.85■□□□□ 0.45
SQSTM1-204ENST00000453046 UNC13CQ8NB66 2214 aa17.84■□□□□ 0.45
SQSTM1-204ENST00000453046 KIF26BQ2KJY2 2108 aa17.84■□□□□ 0.45
SQSTM1-204ENST00000453046 TEX51A0A1B0GUA7 166 aa17.84■□□□□ 0.45
SQSTM1-204ENST00000453046 SMAPO00193 183 aa17.84■□□□□ 0.45
SQSTM1-204ENST00000453046 ERLIN1O75477 346 aa17.84■□□□□ 0.45
SQSTM1-204ENST00000453046 MMP2P08253 660 aa17.84■□□□□ 0.45
SQSTM1-204ENST00000453046 HGFP14210 728 aa17.84■□□□□ 0.45
SQSTM1-204ENST00000453046 MORF4L2Q15014 288 aa17.84■□□□□ 0.45
SQSTM1-204ENST00000453046 QPCTQ16769 361 aa17.84■□□□□ 0.45
SQSTM1-204ENST00000453046 ANKRD20A2Q5SQ80 823 aa17.84■□□□□ 0.45
SQSTM1-204ENST00000453046 PHF19Q5T6S3 580 aa17.84■□□□□ 0.45
SQSTM1-204ENST00000453046 ANKRD20A1Q5TYW2 823 aa17.84■□□□□ 0.45
SQSTM1-204ENST00000453046 ANKRD20A3Q5VUR7 823 aa17.84■□□□□ 0.45
SQSTM1-204ENST00000453046 IZUMO3Q5VZ72 239 aa17.84■□□□□ 0.45
SQSTM1-204ENST00000453046 KDELC2Q7Z4H8 507 aa17.84■□□□□ 0.45
SQSTM1-204ENST00000453046 PCGF5Q86SE9 256 aa17.84■□□□□ 0.45
SQSTM1-204ENST00000453046 CLEC14AQ86T13 490 aa17.84■□□□□ 0.45
SQSTM1-204ENST00000453046 PRUNE1Q86TP1 453 aa17.84■□□□□ 0.45
SQSTM1-204ENST00000453046 PIM3Q86V86 326 aa17.84■□□□□ 0.45
SQSTM1-204ENST00000453046 CNTD1Q8N815 330 aa17.84■□□□□ 0.45
SQSTM1-204ENST00000453046 AGAP3Q96P47 875 aa17.84■□□□□ 0.45
SQSTM1-204ENST00000453046 FAM83DQ9H4H8 585 aa17.84■□□□□ 0.45
SQSTM1-204ENST00000453046 CPNE5Q9HCH3 593 aa17.84■□□□□ 0.45
SQSTM1-204ENST00000453046 PISDQ9UG56 409 aa17.84■□□□□ 0.45
SQSTM1-204ENST00000453046 PLEKHM1Q9Y4G2 1056 aa17.84■□□□□ 0.45
SQSTM1-204ENST00000453046 LOXL2Q9Y4K0 774 aa17.84■□□□□ 0.45
SQSTM1-204ENST00000453046 SMG1Q96Q15 3661 aaKnown RBP17.84■□□□□ 0.45
SQSTM1-204ENST00000453046 ARHGEF17Q96PE2 2063 aaPredicted RBP17.83■□□□□ 0.45
SQSTM1-204ENST00000453046 H2AFXP16104 143 aaPredicted RBP17.83■□□□□ 0.44
SQSTM1-204ENST00000453046 ECHS1P30084 290 aa17.83■□□□□ 0.44
SQSTM1-204ENST00000453046 FDFT1P37268 417 aa17.83■□□□□ 0.44
SQSTM1-204ENST00000453046 MAGEA6P43360 314 aa17.83■□□□□ 0.44
SQSTM1-204ENST00000453046 SPINT3P49223 89 aa17.83■□□□□ 0.44
SQSTM1-204ENST00000453046 CARSP49589 748 aaKnown RBP17.83■□□□□ 0.44
SQSTM1-204ENST00000453046 OR1D5P58170 312 aa17.83■□□□□ 0.44
SQSTM1-204ENST00000453046 B4GALNT1Q00973 533 aa17.83■□□□□ 0.44
SQSTM1-204ENST00000453046 GALNT3Q14435 633 aa17.83■□□□□ 0.44
SQSTM1-204ENST00000453046 PCSK7Q16549 785 aa17.83■□□□□ 0.44
SQSTM1-204ENST00000453046 PYCR3Q53H96 274 aa17.83■□□□□ 0.44
SQSTM1-204ENST00000453046 TEX44Q53QW1 395 aa17.83■□□□□ 0.44
SQSTM1-204ENST00000453046 ARHGAP40Q5TG30 622 aa17.83■□□□□ 0.44
SQSTM1-204ENST00000453046 HOOK3Q86VS8 718 aa17.83■□□□□ 0.44
SQSTM1-204ENST00000453046 C17orf82Q86X59 251 aaPredicted RBP17.83■□□□□ 0.44
SQSTM1-204ENST00000453046 ZNF567Q8N184 647 aa17.83■□□□□ 0.44
SQSTM1-204ENST00000453046 PATE1Q8WXA2 126 aa17.83■□□□□ 0.44
SQSTM1-204ENST00000453046 IFT81Q8WYA0 676 aa17.83■□□□□ 0.44
SQSTM1-204ENST00000453046 TMEM159Q96B96 161 aa17.83■□□□□ 0.44
SQSTM1-204ENST00000453046 SCARF2Q96GP6 870 aaPredicted RBP17.83■□□□□ 0.44
SQSTM1-204ENST00000453046 PPP1R2P1Q96PQ5 205 aa17.83■□□□□ 0.44
SQSTM1-204ENST00000453046 CMKLR1Q99788 373 aa17.83■□□□□ 0.44
SQSTM1-204ENST00000453046 GBA3Q9H227 469 aa17.83■□□□□ 0.44
SQSTM1-204ENST00000453046 RDH14Q9HBH5 336 aa17.83■□□□□ 0.44
SQSTM1-204ENST00000453046 AKAP7Q9P0M2 348 aaPredicted RBP17.83■□□□□ 0.44
SQSTM1-204ENST00000453046 ZNHIT2Q9UHR6 403 aa17.83■□□□□ 0.44
SQSTM1-204ENST00000453046 BPTFQ12830 3046 aa17.83■□□□□ 0.44
SQSTM1-204ENST00000453046 RGSL1A5PLK6 1076 aa17.82■□□□□ 0.44
SQSTM1-204ENST00000453046 B4GAT1O43505 415 aa17.82■□□□□ 0.44
SQSTM1-204ENST00000453046 CPNE6O95741 557 aa17.82■□□□□ 0.44
SQSTM1-204ENST00000453046 SLC5A2P31639 672 aa17.82■□□□□ 0.44
SQSTM1-204ENST00000453046 PPM1FP49593 454 aaPredicted RBP17.82■□□□□ 0.44
SQSTM1-204ENST00000453046 ZFP36L1Q07352 338 aaKnown RBP17.82■□□□□ 0.44
SQSTM1-204ENST00000453046 LRP8Q14114 963 aa17.82■□□□□ 0.44
SQSTM1-204ENST00000453046 TRADDQ15628 312 aa17.82■□□□□ 0.44
SQSTM1-204ENST00000453046 FAM182AQ5T1J6 154 aa17.82■□□□□ 0.44
SQSTM1-204ENST00000453046 RNASEH2BQ5TBB1 312 aaKnown RBP17.82■□□□□ 0.44
SQSTM1-204ENST00000453046 HIBCHQ6NVY1 386 aaPredicted RBP17.82■□□□□ 0.44
SQSTM1-204ENST00000453046 EMBQ6PCB8 327 aa17.82■□□□□ 0.44
SQSTM1-204ENST00000453046 ZDHHC24Q6UX98 284 aa17.82■□□□□ 0.44
SQSTM1-204ENST00000453046 PPIL6Q8IXY8 311 aa17.82■□□□□ 0.44
SQSTM1-204ENST00000453046 NAGSQ8N159 534 aa17.82■□□□□ 0.44
SQSTM1-204ENST00000453046 SLC39A7Q92504 469 aa17.82■□□□□ 0.44
SQSTM1-204ENST00000453046 ART4Q93070 314 aa17.82■□□□□ 0.44
SQSTM1-204ENST00000453046 COX14Q96I36 57 aa17.82■□□□□ 0.44
SQSTM1-204ENST00000453046 TEKT5Q96M29 485 aa17.82■□□□□ 0.44
SQSTM1-204ENST00000453046 FMO2Q99518 471 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms