RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 GAS2L1Q99501 681 aaPredicted RBP14.1□□□□□ -0.15
USP39-207ENST00000450066 WRAP53Q9BUR4 548 aaKnown RBP14.1□□□□□ -0.15
USP39-207ENST00000450066 LATS2Q9NRM7 1088 aa14.1□□□□□ -0.15
USP39-207ENST00000450066 PNPOQ9NVS9 261 aa14.1□□□□□ -0.15
USP39-207ENST00000450066 HAO1Q9UJM8 370 aa14.1□□□□□ -0.15
USP39-207ENST00000450066 RAP2CQ9Y3L5 183 aa14.1□□□□□ -0.15
USP39-207ENST00000450066 TICRRQ7Z2Z1 1910 aa14.09□□□□□ -0.15
USP39-207ENST00000450066 PLXNB3Q9ULL4 1909 aa14.09□□□□□ -0.15
USP39-207ENST00000450066 SYCE1LA8MT33 242 aa14.09□□□□□ -0.15
USP39-207ENST00000450066 SPECC1L-ADORA2AF8WAN1 911 aa14.09□□□□□ -0.15
USP39-207ENST00000450066 BTN3A1O00481 513 aa14.09□□□□□ -0.15
USP39-207ENST00000450066 TRIM16O95361 564 aa14.09□□□□□ -0.15
USP39-207ENST00000450066 MTHFD2P13995 350 aa14.09□□□□□ -0.15
USP39-207ENST00000450066 ALOX15P16050 662 aaPredicted RBP14.09□□□□□ -0.15
USP39-207ENST00000450066 GM2AP17900 193 aa14.09□□□□□ -0.15
USP39-207ENST00000450066 PSMD8P48556 350 aa14.09□□□□□ -0.15
USP39-207ENST00000450066 PRKAA1Q13131 559 aa14.09□□□□□ -0.15
USP39-207ENST00000450066 CRY1Q16526 586 aa14.09□□□□□ -0.15
USP39-207ENST00000450066 HSF5Q4G112 596 aaPredicted RBP14.09□□□□□ -0.15
USP39-207ENST00000450066 ZNF781Q8N8C0 355 aa14.09□□□□□ -0.15
USP39-207ENST00000450066 EZH1Q92800 747 aaPredicted RBP14.09□□□□□ -0.15
USP39-207ENST00000450066 FUBP1Q96AE4 644 aaKnown RBP14.09□□□□□ -0.15
USP39-207ENST00000450066 PHF21BQ96EK2 531 aa14.09□□□□□ -0.15
USP39-207ENST00000450066 L3HYPDHQ96EM0 354 aa14.09□□□□□ -0.15
USP39-207ENST00000450066 MOCOSQ96EN8 888 aa14.09□□□□□ -0.15
USP39-207ENST00000450066 VPS35Q96QK1 796 aa14.09□□□□□ -0.15
USP39-207ENST00000450066 PANX3Q96QZ0 392 aa14.09□□□□□ -0.15
USP39-207ENST00000450066 WWP1Q9H0M0 922 aa14.09□□□□□ -0.15
USP39-207ENST00000450066 RSPH9Q9H1X1 276 aaPredicted RBP14.09□□□□□ -0.15
USP39-207ENST00000450066 ABCG8Q9H221 673 aa14.09□□□□□ -0.15
USP39-207ENST00000450066 STN1Q9H668 368 aaKnown RBP14.09□□□□□ -0.15
USP39-207ENST00000450066 CYP4F12Q9HCS2 524 aa14.09□□□□□ -0.15
USP39-207ENST00000450066 SPATS2LQ9NUQ6 558 aaKnown RBP14.09□□□□□ -0.15
USP39-207ENST00000450066 KLHL42Q9P2K6 505 aa14.09□□□□□ -0.15
USP39-207ENST00000450066 RNF112Q9ULX5 631 aa14.09□□□□□ -0.15
USP39-207ENST00000450066 PLXNA2O75051 1894 aa14.09□□□□□ -0.15
USP39-207ENST00000450066 PRUNE2Q8WUY3 3088 aa14.08□□□□□ -0.15
USP39-207ENST00000450066 C2CD4DB7Z1M9 353 aa14.08□□□□□ -0.15
USP39-207ENST00000450066 CDC7O00311 574 aa14.08□□□□□ -0.15
USP39-207ENST00000450066 RNASEH1O60930 286 aaKnown RBP14.08□□□□□ -0.15
USP39-207ENST00000450066 CHRNGP07510 517 aa14.08□□□□□ -0.15
USP39-207ENST00000450066 P2RY2P41231 377 aa14.08□□□□□ -0.15
USP39-207ENST00000450066 HK2P52789 917 aa14.08□□□□□ -0.15
USP39-207ENST00000450066 CREB5Q02930 508 aa14.08□□□□□ -0.15
USP39-207ENST00000450066 TSNQ15631 228 aaKnown RBP14.08□□□□□ -0.15
USP39-207ENST00000450066 GALNTL6Q49A17 601 aa14.08□□□□□ -0.15
USP39-207ENST00000450066 TMEM52BQ4KMG9 183 aa14.08□□□□□ -0.15
USP39-207ENST00000450066 TXNDC11Q6PKC3 985 aa14.08□□□□□ -0.15
USP39-207ENST00000450066 LSMEM2Q8N112 164 aa14.08□□□□□ -0.15
USP39-207ENST00000450066 DDHD1Q8NEL9 900 aa14.08□□□□□ -0.15
USP39-207ENST00000450066 LKAAEAR1Q8TD35 194 aa14.08□□□□□ -0.15
USP39-207ENST00000450066 NAT14Q8WUY8 206 aa14.08□□□□□ -0.15
USP39-207ENST00000450066 AP2M1Q96CW1 435 aa14.08□□□□□ -0.15
USP39-207ENST00000450066 DTD2Q96FN9 168 aa14.08□□□□□ -0.15
USP39-207ENST00000450066 DCUN1D1Q96GG9 259 aa14.08□□□□□ -0.15
USP39-207ENST00000450066 HEY2Q9UBP5 337 aa14.08□□□□□ -0.15
USP39-207ENST00000450066 IKZF3Q9UKT9 509 aa14.08□□□□□ -0.15
USP39-207ENST00000450066 COLQQ9Y215 455 aaPredicted RBP14.08□□□□□ -0.15
USP39-207ENST00000450066 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.08□□□□□ -0.15
USP39-207ENST00000450066 CFAP99D6REC4 459 aa14.08□□□□□ -0.16
USP39-207ENST00000450066 UBXN8O00124 270 aa14.08□□□□□ -0.16
USP39-207ENST00000450066 PLK4O00444 970 aa14.08□□□□□ -0.16
USP39-207ENST00000450066 NEMP1O14524 444 aa14.08□□□□□ -0.16
USP39-207ENST00000450066 SYNCRIPO60506 623 aaKnown RBP14.08□□□□□ -0.16
USP39-207ENST00000450066 MAGEC1O60732 1142 aa14.08□□□□□ -0.16
USP39-207ENST00000450066 OR56A5P0C7T3 313 aa14.08□□□□□ -0.16
USP39-207ENST00000450066 ATP1B2P14415 290 aaPredicted RBP14.08□□□□□ -0.16
USP39-207ENST00000450066 DGKAP23743 735 aa14.08□□□□□ -0.16
USP39-207ENST00000450066 WASP42768 502 aa14.08□□□□□ -0.16
USP39-207ENST00000450066 RGS4P49798 205 aa14.08□□□□□ -0.16
USP39-207ENST00000450066 HERVK_113P63132 956 aa14.08□□□□□ -0.16
USP39-207ENST00000450066 SMAD4Q13485 552 aaKnown RBP14.08□□□□□ -0.16
USP39-207ENST00000450066 ZNF765Q7L2R6 523 aa14.08□□□□□ -0.16
USP39-207ENST00000450066 MTDHQ86UE4 582 aaKnown RBP14.08□□□□□ -0.16
USP39-207ENST00000450066 RALGPS2Q86X27 583 aaPredicted RBP14.08□□□□□ -0.16
USP39-207ENST00000450066 ZBTB2Q8N680 514 aa14.08□□□□□ -0.16
USP39-207ENST00000450066 KCNV2Q8TDN2 545 aa14.08□□□□□ -0.16
USP39-207ENST00000450066 BTN2A2Q8WVV5 523 aa14.08□□□□□ -0.16
USP39-207ENST00000450066 TRMOQ9BU70 441 aa14.08□□□□□ -0.16
USP39-207ENST00000450066 ERVK-6Q9BXR3 956 aa14.08□□□□□ -0.16
USP39-207ENST00000450066 KCNK12Q9HB15 430 aa14.08□□□□□ -0.16
USP39-207ENST00000450066 ACSS2Q9NR19 701 aa14.08□□□□□ -0.16
USP39-207ENST00000450066 NPEPPSL1A6NEC2 478 aa14.07□□□□□ -0.16
USP39-207ENST00000450066 FADS2P1A8MWK0 482 aa14.07□□□□□ -0.16
USP39-207ENST00000450066 ZNF195O14628 629 aa14.07□□□□□ -0.16
USP39-207ENST00000450066 HGSO14964 777 aaPredicted RBP14.07□□□□□ -0.16
USP39-207ENST00000450066 UBOX5O94941 541 aa14.07□□□□□ -0.16
USP39-207ENST00000450066 ITGB6P18564 788 aa14.07□□□□□ -0.16
USP39-207ENST00000450066 AKT1P31749 480 aa14.07□□□□□ -0.16
USP39-207ENST00000450066 TIE1P35590 1138 aa14.07□□□□□ -0.16
USP39-207ENST00000450066 CCR10P46092 362 aa14.07□□□□□ -0.16
USP39-207ENST00000450066 RPL14P50914 215 aaKnown RBP14.07□□□□□ -0.16
USP39-207ENST00000450066 SEC13P55735 322 aa14.07□□□□□ -0.16
USP39-207ENST00000450066 SATB1Q01826 763 aa14.07□□□□□ -0.16
USP39-207ENST00000450066 GALNT1Q10472 559 aaPredicted RBP14.07□□□□□ -0.16
USP39-207ENST00000450066 CNTN1Q12860 1018 aa14.07□□□□□ -0.16
USP39-207ENST00000450066 TTLL9Q3SXZ7 439 aa14.07□□□□□ -0.16
USP39-207ENST00000450066 SPDYAQ5MJ70 313 aa14.07□□□□□ -0.16
USP39-207ENST00000450066 LDLRAP1Q5SW96 308 aa14.07□□□□□ -0.16
USP39-207ENST00000450066 ZNF678Q5SXM1 525 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms