RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 MPP1Q00013 466 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 ZBTB6Q15916 424 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 NOMO2Q5JPE7 1267 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 GCNT6Q5T4J0 391 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 C9orf57Q5W0N0 161 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 C17orf64Q86WR6 236 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 C10orf82Q8WW14 230 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 GPATCH1Q9BRR8 931 aaKnown RBP7.72□□□□□ -1.17
NEDD9-204ENST00000448183 ST6GALNAC4Q9H4F1 302 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 CNOT6Q9ULM6 557 aaKnown RBP7.72□□□□□ -1.17
NEDD9-204ENST00000448183 CNTN6Q9UQ52 1028 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 TCAF1Q9Y4C2 921 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 TRIM17Q9Y577 477 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 A0A0X1KG70 313 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 GTPBP1O00178 669 aaKnown RBP7.72□□□□□ -1.17
NEDD9-204ENST00000448183 ZW10O43264 779 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 CLDN11O75508 207 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 CLDN9O95484 217 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 ICAM3P32942 547 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 GJA8P48165 433 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 CLK3P49761 638 aaKnown RBP7.72□□□□□ -1.17
NEDD9-204ENST00000448183 TPTEP56180 551 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 YBEYP58557 167 aaPredicted RBP7.72□□□□□ -1.17
NEDD9-204ENST00000448183 PPP2R2BQ00005 443 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 CYP1B1Q16678 543 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 PARP15Q460N3 678 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 C9orf64Q5T6V5 341 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 TMEM214Q6NUQ4 689 aaKnown RBP7.72□□□□□ -1.17
NEDD9-204ENST00000448183 ZNF730Q6ZMV8 503 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 FRMD7Q6ZUT3 714 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 BEND5Q7L4P6 421 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.72□□□□□ -1.17
NEDD9-204ENST00000448183 ADAMTS15Q8TE58 950 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 XAGE5Q8WWM1 108 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 CLIP3Q96DZ5 547 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 BTN2A3PQ96KV6 586 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 TBATAQ96M53 351 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 MNTQ99583 582 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 TCF25Q9BQ70 676 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 FEM1AQ9BSK4 669 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 ACAT2Q9BWD1 397 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 CD320Q9NPF0 282 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 RIC1Q4ADV7 1423 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 IFNA6P05013 189 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 PGRP06401 933 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 AMD1P17707 334 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 FECHP22830 423 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 CCNCP24863 283 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 HTR7P34969 479 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 CRYBB1P53674 252 aaPredicted RBP7.72□□□□□ -1.17
NEDD9-204ENST00000448183 DCST1Q5T197 706 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 SDHAF4Q5VUM1 108 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 C9orf131Q5VYM1 1079 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 PAOXQ6QHF9 649 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 RTL4Q6ZR62 310 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 CHST15Q7LFX5 561 aaPredicted RBP7.72□□□□□ -1.17
NEDD9-204ENST00000448183 FSTL5Q8N475 847 aaPredicted RBP7.72□□□□□ -1.17
NEDD9-204ENST00000448183 TTC29Q8NA56 475 aaPredicted RBP7.72□□□□□ -1.17
NEDD9-204ENST00000448183 FAM156AQ8NDB6 213 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 SUN5Q8TC36 379 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 FCGR1BQ92637 280 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 RERGQ96A58 199 aaPredicted RBP7.72□□□□□ -1.17
NEDD9-204ENST00000448183 TAMM41Q96BW9 452 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 DNAJC1Q96KC8 554 aaKnown RBP7.72□□□□□ -1.17
NEDD9-204ENST00000448183 ARHGEF4Q9NR80 690 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 MIOSQ9NXC5 875 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 SLC7A8Q9UHI5 535 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 BCL9O00512 1426 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 ATRNO75882 1429 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 ABHD14A-ACY1A0A1B0GW23 586 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 MANSC4A6NHS7 340 aaPredicted RBP7.71□□□□□ -1.17
NEDD9-204ENST00000448183 C9JVG2 144 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 TBX10O75333 385 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 ATP6V1G1O75348 118 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 AMHP03971 560 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 GJB1P08034 283 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 WDR4P57081 412 aaKnown RBP7.71□□□□□ -1.17
NEDD9-204ENST00000448183 E2F2Q14209 437 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 MYBPC3Q14896 1274 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 VSTM1Q6UX27 236 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 CXCL17Q6UXB2 119 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 SERPINA13PQ6UXR4 307 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 BTN2A1Q7KYR7 527 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 ZNF572Q7Z3I7 529 aaPredicted RBP7.71□□□□□ -1.17
NEDD9-204ENST00000448183 ZNF567Q8N184 647 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 AP2M1Q96CW1 435 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 FCRL4Q96PJ5 515 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 TTLL2Q9BWV7 592 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 ZNF224Q9NZL3 707 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 HMGXB4Q9UGU5 601 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 BAIAP2Q9UQB8 552 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 MAN2B2Q9Y2E5 1009 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 PCDHGA10Q9Y5H3 936 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 DISP2A7MBM2 1401 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 MYPNQ86TC9 1320 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 ORC5O43913 435 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 NOS1APO75052 506 aaPredicted RBP7.71□□□□□ -1.17
NEDD9-204ENST00000448183 ERN1O75460 977 aaKnown RBP7.71□□□□□ -1.17
NEDD9-204ENST00000448183 SNX4O95219 450 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 TOP3BO95985 862 aaKnown RBP7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms