RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 SMAD1Q15797 465 aaKnown RBP11.46□□□□□ -0.57
LINC00408-201ENST00000447784 HSP90AA5PQ58FG0 334 aa11.46□□□□□ -0.57
LINC00408-201ENST00000447784 RNF187Q5TA31 235 aaPredicted RBP11.46□□□□□ -0.57
LINC00408-201ENST00000447784 ZNF470Q6ECI4 717 aa11.46□□□□□ -0.57
LINC00408-201ENST00000447784 WDR93Q6P2C0 686 aa11.46□□□□□ -0.57
LINC00408-201ENST00000447784 MARK2Q7KZI7 788 aaKnown RBP11.46□□□□□ -0.57
LINC00408-201ENST00000447784 KCNMB4Q86W47 210 aa11.46□□□□□ -0.57
LINC00408-201ENST00000447784 RELL1Q8IUW5 271 aa11.46□□□□□ -0.57
LINC00408-201ENST00000447784 HID1Q8IV36 788 aa11.46□□□□□ -0.57
LINC00408-201ENST00000447784 RBFAQ8N0V3 343 aa11.46□□□□□ -0.57
LINC00408-201ENST00000447784 DDHD1Q8NEL9 900 aa11.46□□□□□ -0.57
LINC00408-201ENST00000447784 CERS2Q96G23 380 aa11.46□□□□□ -0.57
LINC00408-201ENST00000447784 MS4A3Q96HJ5 214 aa11.46□□□□□ -0.57
LINC00408-201ENST00000447784 COX14Q96I36 57 aa11.46□□□□□ -0.57
LINC00408-201ENST00000447784 TCF12Q99081 682 aa11.46□□□□□ -0.57
LINC00408-201ENST00000447784 SLC13A1Q9BZW2 595 aa11.46□□□□□ -0.57
LINC00408-201ENST00000447784 OR2AG1Q9H205 316 aa11.46□□□□□ -0.57
LINC00408-201ENST00000447784 RMI1Q9H9A7 625 aa11.46□□□□□ -0.57
LINC00408-201ENST00000447784 ARFGAP3Q9NP61 516 aa11.46□□□□□ -0.57
LINC00408-201ENST00000447784 DNAJC28Q9NX36 388 aa11.46□□□□□ -0.57
LINC00408-201ENST00000447784 VPS18Q9P253 973 aa11.46□□□□□ -0.57
LINC00408-201ENST00000447784 TXNDC16Q9P2K2 825 aa11.46□□□□□ -0.57
LINC00408-201ENST00000447784 ZNHIT2Q9UHR6 403 aa11.46□□□□□ -0.57
LINC00408-201ENST00000447784 PCOLCE2Q9UKZ9 415 aa11.46□□□□□ -0.57
LINC00408-201ENST00000447784 CNOT6Q9ULM6 557 aaKnown RBP11.46□□□□□ -0.57
LINC00408-201ENST00000447784 TMEM202A6NGA9 273 aa11.45□□□□□ -0.58
LINC00408-201ENST00000447784 GPR89AB7ZAQ6 455 aa11.45□□□□□ -0.58
LINC00408-201ENST00000447784 GPR39O43194 453 aa11.45□□□□□ -0.58
LINC00408-201ENST00000447784 MTX2O75431 263 aa11.45□□□□□ -0.58
LINC00408-201ENST00000447784 TRIM16O95361 564 aa11.45□□□□□ -0.58
LINC00408-201ENST00000447784 GPR89BP0CG08 455 aa11.45□□□□□ -0.58
LINC00408-201ENST00000447784 ERVK-10P10266 1014 aa11.45□□□□□ -0.58
LINC00408-201ENST00000447784 CTSEP14091 401 aa11.45□□□□□ -0.58
LINC00408-201ENST00000447784 ZNF7P17097 686 aaPredicted RBP11.45□□□□□ -0.58
LINC00408-201ENST00000447784 OGNP20774 298 aaKnown RBP11.45□□□□□ -0.58
LINC00408-201ENST00000447784 ACRV1P26436 265 aa11.45□□□□□ -0.58
LINC00408-201ENST00000447784 ECHS1P30084 290 aa11.45□□□□□ -0.58
LINC00408-201ENST00000447784 SSTR1P30872 391 aa11.45□□□□□ -0.58
LINC00408-201ENST00000447784 GRK6P43250 576 aa11.45□□□□□ -0.58
LINC00408-201ENST00000447784 ARCN1P48444 511 aaKnown RBP11.45□□□□□ -0.58
LINC00408-201ENST00000447784 POLD2P49005 469 aa11.45□□□□□ -0.58
LINC00408-201ENST00000447784 SIM1P81133 766 aaPredicted RBP11.45□□□□□ -0.58
LINC00408-201ENST00000447784 TMEM115Q12893 351 aaPredicted RBP11.45□□□□□ -0.58
LINC00408-201ENST00000447784 FRG1Q14331 258 aaKnown RBP11.45□□□□□ -0.58
LINC00408-201ENST00000447784 FZD2Q14332 565 aa11.45□□□□□ -0.58
LINC00408-201ENST00000447784 ITIH4Q14624 930 aa11.45□□□□□ -0.58
LINC00408-201ENST00000447784 TRIP6Q15654 476 aaKnown RBP11.45□□□□□ -0.58
LINC00408-201ENST00000447784 KYNUQ16719 465 aa11.45□□□□□ -0.58
LINC00408-201ENST00000447784 INAVAQ3KP66 663 aa11.45□□□□□ -0.58
LINC00408-201ENST00000447784 MAP9Q49MG5 647 aa11.45□□□□□ -0.58
LINC00408-201ENST00000447784 ZNF648Q5T619 568 aaPredicted RBP11.45□□□□□ -0.58
LINC00408-201ENST00000447784 STEAP4Q687X5 459 aa11.45□□□□□ -0.58
LINC00408-201ENST00000447784 TRMT10CQ7L0Y3 403 aaKnown RBP11.45□□□□□ -0.58
LINC00408-201ENST00000447784 SPATS2Q86XZ4 545 aaKnown RBP11.45□□□□□ -0.58
LINC00408-201ENST00000447784 GALNT13Q8IUC8 556 aa11.45□□□□□ -0.58
LINC00408-201ENST00000447784 SLC22A18ASQ8N1D0 253 aa11.45□□□□□ -0.58
LINC00408-201ENST00000447784 GPR150Q8NGU9 434 aa11.45□□□□□ -0.58
LINC00408-201ENST00000447784 BAHD1Q8TBE0 780 aaPredicted RBP11.45□□□□□ -0.58
LINC00408-201ENST00000447784 SCG3Q8WXD2 468 aaKnown RBP11.45□□□□□ -0.58
LINC00408-201ENST00000447784 ZNF514Q96K75 400 aaPredicted RBP11.45□□□□□ -0.58
LINC00408-201ENST00000447784 CAMK1GQ96NX5 476 aa11.45□□□□□ -0.58
LINC00408-201ENST00000447784 CDC6Q99741 560 aa11.45□□□□□ -0.58
LINC00408-201ENST00000447784 PARD6BQ9BYG5 372 aa11.45□□□□□ -0.58
LINC00408-201ENST00000447784 CLPBQ9H078 707 aa11.45□□□□□ -0.58
LINC00408-201ENST00000447784 CARS2Q9HA77 564 aaKnown RBP11.45□□□□□ -0.58
LINC00408-201ENST00000447784 CYP4F12Q9HCS2 524 aa11.45□□□□□ -0.58
LINC00408-201ENST00000447784 IARS2Q9NSE4 1012 aaKnown RBP11.45□□□□□ -0.58
LINC00408-201ENST00000447784 ZFATQ9P243 1243 aa11.45□□□□□ -0.58
LINC00408-201ENST00000447784 ANGPTL2Q9UKU9 493 aa11.45□□□□□ -0.58
LINC00408-201ENST00000447784 WASF3Q9UPY6 502 aa11.45□□□□□ -0.58
LINC00408-201ENST00000447784 SLC17A4Q9Y2C5 497 aa11.45□□□□□ -0.58
LINC00408-201ENST00000447784 GPSM3Q9Y4H4 160 aa11.45□□□□□ -0.58
LINC00408-201ENST00000447784 TRBV5-4A0A0C4DH59 114 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 SPAARA0A1B0GVQ0 90 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 PRSS38A1L453 326 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 AGAP14A8MT82 685 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 QSOX1O00391 747 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 CEACAM5P06731 702 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 IVLP07476 585 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 PRSS56P0CW18 603 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 ATP1B2P14415 290 aaPredicted RBP11.44□□□□□ -0.58
LINC00408-201ENST00000447784 ZNF8P17098 575 aaPredicted RBP11.44□□□□□ -0.58
LINC00408-201ENST00000447784 JUNDP17535 347 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 VCLP18206 1134 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 ARNTP27540 789 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 NSG1P42857 185 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 GNPDA1P46926 289 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 CDKN1CP49918 316 aaPredicted RBP11.44□□□□□ -0.58
LINC00408-201ENST00000447784 PMS2P54278 862 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 HNRNPKP61978 463 aaKnown RBP eCLIP11.44□□□□□ -0.58
LINC00408-201ENST00000447784 VSNL1P62760 191 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 DBN1Q16643 649 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 ALG11Q2TAA5 492 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 ZNF542PQ5EBM4 170 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 ZNF449Q6P9G9 518 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 DET1Q7L5Y6 550 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 ADGRG6Q86SQ4 1221 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 LRRC6Q86X45 466 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 TRAPPC5Q8IUR0 188 aa11.44□□□□□ -0.58
LINC00408-201ENST00000447784 CTAGE3PQ8IX95 158 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms