RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 DIAPH3Q9NSV4 1193 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 IL37Q9NZH6 218 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 NDOR1Q9UHB4 597 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 ZNHIT2Q9UHR6 403 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 TINAGQ9UJW2 476 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 CDH9Q9ULB4 789 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 PADI1Q9ULC6 663 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 ZNF510Q9Y2H8 683 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 NME7Q9Y5B8 376 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 CHD3Q12873 2000 aaKnown RBP4.96□□□□□ -1.62
SDCBP-205ENST00000447267 HYDINQ4G0P3 5121 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 ARHGEF35A5YM69 484 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 NKX2-6A6NCS4 301 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 RHPN2P1A8MT19 583 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 M0QYT0 321 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 CYR61O00622 381 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 NUDT21O43809 227 aaKnown RBP4.95□□□□□ -1.62
SDCBP-205ENST00000447267 FAM189A1O60320 539 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 SHOX2O60902 331 aaPredicted RBP4.95□□□□□ -1.62
SDCBP-205ENST00000447267 CLSTN1O94985 981 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 RAF1P04049 648 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 TPOP07202 933 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 ALPIP09923 528 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 PTPN4P29074 926 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 PPM1FP49593 454 aaPredicted RBP4.95□□□□□ -1.62
SDCBP-205ENST00000447267 HMGA2P52926 109 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 FOXL1Q12952 345 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 SNTB1Q13884 538 aaKnown RBP4.95□□□□□ -1.62
SDCBP-205ENST00000447267 NRN1LQ496H8 165 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 BMP2KLQ5H9B9 411 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 CATSPEREQ5SY80 951 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 UBAP2Q5T6F2 1119 aaKnown RBP4.95□□□□□ -1.62
SDCBP-205ENST00000447267 ZNF324BQ6AW86 544 aaPredicted RBP4.95□□□□□ -1.62
SDCBP-205ENST00000447267 FAM180AQ6UWF9 173 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 PAMR1Q6UXH9 720 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 GKN2Q86XP6 184 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 HIPK1Q86Z02 1210 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 ARFGAP1Q8N6T3 406 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 GOT1L1Q8NHS2 421 aaPredicted RBP4.95□□□□□ -1.62
SDCBP-205ENST00000447267 IL17DQ8TAD2 202 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 DNAJB14Q8TBM8 379 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 CA5BP1Q8WTZ4 195 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 CCDC12Q8WUD4 166 aaPredicted RBP4.95□□□□□ -1.62
SDCBP-205ENST00000447267 SDCCAG3Q96C92 435 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 LMLNQ96KR4 655 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 SECISBP2Q96T21 854 aaKnown RBP4.95□□□□□ -1.62
SDCBP-205ENST00000447267 DNAJC7Q99615 494 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 AMBRA1Q9C0C7 1298 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 OR10A5Q9H207 317 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 DPEP3Q9H4B8 488 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 IL17CQ9P0M4 197 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 KCNN3Q9UGI6 736 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 VPS51Q9UID3 782 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 RASAL2Q9UJF2 1139 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 PLEKHM1Q9Y4G2 1056 aa4.95□□□□□ -1.62
SDCBP-205ENST00000447267 NYNRINQ9P2P1 1898 aaKnown RBP4.94□□□□□ -1.62
SDCBP-205ENST00000447267 LOC100653049A0A140TA62 436 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 GOLGA6L7A0A1B0GV03 622 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 IGLON5A6NGN9 336 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 FOXO6A8MYZ6 492 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 CLIC2O15247 247 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 ZNHIT1O43257 154 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 CCNT1O60563 726 aaKnown RBP4.94□□□□□ -1.62
SDCBP-205ENST00000447267 MED24O75448 989 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 KRT34O76011 436 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 KIF20AO95235 890 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 ZNF18P17022 549 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 MAN1A1P33908 653 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 TSFMP43897 325 aaKnown RBP4.94□□□□□ -1.62
SDCBP-205ENST00000447267 ACOT2P49753 483 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 HK3P52790 923 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 STRN3Q13033 797 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 ELAVL3Q14576 367 aaKnown RBP4.94□□□□□ -1.62
SDCBP-205ENST00000447267 NPY5RQ15761 445 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 LONRF2Q1L5Z9 754 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 ALG11Q2TAA5 492 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 FAM174BQ3ZCQ3 159 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 ZMAT1Q5H9K5 638 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 FAM46CQ5VWP2 391 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 ANKRD40Q6AI12 368 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 NEK5Q6P3R8 708 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 TMEM71Q6P5X7 295 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 C12orf54Q6X4T0 127 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 SYNE3Q6ZMZ3 975 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 TAF8Q7Z7C8 310 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 ZZZ3Q8IYH5 903 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 DAW1Q8N136 415 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 CPXM2Q8N436 756 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 BCORP1Q8N888 145 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 OR14K1Q8NGZ2 314 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 SGMS2Q8NHU3 365 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 CCL4L1Q8NHW4 92 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 FOXRED1Q96CU9 486 aaPredicted RBP4.94□□□□□ -1.62
SDCBP-205ENST00000447267 RBMXL1Q96E39 390 aaKnown RBP4.94□□□□□ -1.62
SDCBP-205ENST00000447267 SCYL1Q96KG9 808 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 CNDP1Q96KN2 507 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 MAGEB10Q96LZ2 347 aaPredicted RBP4.94□□□□□ -1.62
SDCBP-205ENST00000447267 TBATAQ96M53 351 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 GBP4Q96PP9 640 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 DPEP2Q9H4A9 486 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms