RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 SEC14L3Q9UDX4 400 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 TRAF6Q9Y4K3 522 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 ADAMTSL3P82987 1691 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 SYPP08247 313 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 NR2F6P10588 404 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 HRH2P25021 359 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 SOX11P35716 441 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 PRKD1Q15139 912 aaPredicted RBP8.48□□□□□ -1.05
PTPN3-204ENST00000446349 HECTD2Q5U5R9 776 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 DRICH1Q6PGQ1 229 aaPredicted RBP8.48□□□□□ -1.05
PTPN3-204ENST00000446349 LRRTM4Q86VH4 590 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 CREG2Q8IUH2 290 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 AMER2Q8N7J2 671 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 SH3RF2Q8TEC5 729 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 EFHD2Q96C19 240 aaPredicted RBP8.48□□□□□ -1.05
PTPN3-204ENST00000446349 CAMK1GQ96NX5 476 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 NDC1Q9BTX1 674 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 DHX15O43143 795 aaKnown RBP8.48□□□□□ -1.05
PTPN3-204ENST00000446349 LRIG2O94898 1065 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 CSTF2P33240 577 aaKnown RBP eCLIP8.48□□□□□ -1.05
PTPN3-204ENST00000446349 NUDT1P36639 197 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 RPS6KA3P51812 740 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 ARHGDIBP52566 201 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 ZNF132P52740 706 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 ARFIP1P53367 373 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 POM121L1PQ3SYA9 428 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 PTPN20Q4JDL3 420 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 MRPS30Q9NP92 439 aaKnown RBP8.48□□□□□ -1.05
PTPN3-204ENST00000446349 EVLQ9UI08 416 aaPredicted RBP8.48□□□□□ -1.05
PTPN3-204ENST00000446349 PHF11Q9UIL8 331 aa8.48□□□□□ -1.05
PTPN3-204ENST00000446349 ZMYND8Q9ULU4 1186 aaPredicted RBP8.48□□□□□ -1.05
PTPN3-204ENST00000446349 AHDC1Q5TGY3 1603 aaPredicted RBP8.48□□□□□ -1.05
PTPN3-204ENST00000446349 H0YGN5 161 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 ALAS2P22557 587 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 PSMB9P28065 219 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 ZNF844Q08AG5 666 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 TRAF3Q13114 568 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 IRF2BP2Q7Z5L9 587 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 ARL14EPQ8N8R7 260 aaPredicted RBP8.47□□□□□ -1.05
PTPN3-204ENST00000446349 C5orf34Q96MH7 638 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 NELL2Q99435 816 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 FUT8Q9BYC5 575 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 B3GAT2Q9NPZ5 323 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 KLHL1Q9NR64 748 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 RASSF1Q9NS23 344 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 H0YJX3 145 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 SLC22A2O15244 555 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 BCAP31P51572 246 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 CORO7P57737 925 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 CSNK2BP67870 215 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 ZNF155Q12901 538 aaPredicted RBP8.47□□□□□ -1.05
PTPN3-204ENST00000446349 UBXN11Q5T124 520 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 SLC30A9Q6PML9 568 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 ATG14Q6ZNE5 492 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 HID1Q8IV36 788 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 TRPV3Q8NET8 790 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 KBTBD8Q8NFY9 601 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 AENQ8WTP8 325 aaKnown RBP8.47□□□□□ -1.05
PTPN3-204ENST00000446349 BAP1Q92560 729 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 MBOAT7Q96N66 472 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 IGSF9Q9P2J2 1179 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 PADI2Q9Y2J8 665 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 SOCS5O75159 536 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 TRIM3O75382 744 aaPredicted RBP8.47□□□□□ -1.05
PTPN3-204ENST00000446349 MPIP34949 423 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 KHKP50053 298 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 SNAP47Q5SQN1 464 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 CDRT15Q96T59 188 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 EFCAB11Q9BUY7 163 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 SUV39H2Q9H5I1 410 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 ZNF282Q9UDV7 671 aaPredicted RBP8.47□□□□□ -1.05
PTPN3-204ENST00000446349 IKZF3Q9UKT9 509 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 ZNF490Q9ULM2 529 aaPredicted RBP8.47□□□□□ -1.05
PTPN3-204ENST00000446349 FZD10Q9ULW2 581 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 ERVK-11Q9UQG0 969 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 LRCH1Q9Y2L9 728 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 YIPF1Q9Y548 306 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 RIPK3Q9Y572 518 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 PCDHGB7Q9Y5F8 929 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 WASHC1A8K0Z3 465 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 WASH3PC4AMC7 463 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 KCNJ13O60928 360 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 CBX5P45973 191 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 XIAPP98170 497 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 CPSF6Q16630 551 aaKnown RBP eCLIP8.47□□□□□ -1.05
PTPN3-204ENST00000446349 ZNF792Q3KQV3 632 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 ITPRIPL2Q3MIP1 535 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 WASH2PQ6VEQ5 465 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 LINC00471Q8N535 108 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 IL23AQ9NPF7 189 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 LYVE1Q9Y5Y7 322 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 NUP188Q5SRE5 1749 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 PITPNM1O00562 1244 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 F2P00734 622 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 SPATA31D3P0C874 917 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 DUPD1Q68J44 220 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 DNM1P34Q6PK57 102 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 PRR23BQ6ZRT6 265 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 SPATA31D4Q6ZUB0 917 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 ATCAYQ86WG3 371 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms