RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 ASGR1P07306 291 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 PABPC4LP0CB38 370 aaKnown RBP16.49■□□□□ 0.23
TCOF1-206ENST00000445265 SLC35E2BP0CK96 405 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 KIR3DL1P43629 444 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 CCR10P46092 362 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 LSM3P62310 102 aaKnown RBP16.49■□□□□ 0.23
TCOF1-206ENST00000445265 FBXL22Q6P050 247 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 ERICH5Q6P6B1 374 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 CRTC3Q6UUV7 619 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 ZBTB46Q86UZ6 589 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 MARVELD2Q8N4S9 558 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 ZBTB2Q8N680 514 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 TRPV3Q8NET8 790 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 NLGN2Q8NFZ4 835 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 MRPL17Q9NRX2 175 aaKnown RBP16.49■□□□□ 0.23
TCOF1-206ENST00000445265 RBM47A0AV96 593 aaKnown RBP16.49■□□□□ 0.23
TCOF1-206ENST00000445265 EOMESO95936 686 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 ACADVLP49748 655 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 CDC42P60953 191 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 TJAP1Q5JTD0 557 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 TMEM214Q6NUQ4 689 aaKnown RBP16.49■□□□□ 0.23
TCOF1-206ENST00000445265 UBE2R2Q712K3 238 aaPredicted RBP16.49■□□□□ 0.23
TCOF1-206ENST00000445265 OR9I1Q8NGQ6 314 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 YME1L1Q96TA2 773 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 ITGB1BP2Q9UKP3 347 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 OAZ3Q9UMX2 235 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 KLHL20Q9Y2M5 609 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 ZFP37Q9Y6Q3 630 aaPredicted RBP16.49■□□□□ 0.23
TCOF1-206ENST00000445265 TCRBV5S1A1TA0A578 114 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 LRATO95237 230 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 IQCF3P0C7M6 154 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 ALOX12P18054 663 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 TUBA4AP68366 448 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 BTG3Q14201 252 aaPredicted RBP16.48■□□□□ 0.23
TCOF1-206ENST00000445265 PHKG1Q16816 387 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 SPATS1Q496A3 300 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 XKR6Q5GH73 641 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 PERM1Q5SV97 790 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 HID1Q8IV36 788 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 SIDT2Q8NBJ9 832 aaKnown RBP16.48■□□□□ 0.23
TCOF1-206ENST00000445265 KBTBD8Q8NFY9 601 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 CLHC1Q8NHS4 586 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 PROX1Q92786 737 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 PCDH12Q9NPG4 1184 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 CLDN9O95484 217 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 PRKAR2AP13861 404 aaKnown RBP16.48■□□□□ 0.23
TCOF1-206ENST00000445265 CDH3P22223 829 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 ALDH9A1P49189 494 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 PFKPQ01813 784 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 KCTD8Q6ZWB6 473 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 SLC13A3Q8WWT9 602 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 BRI3BPQ8WY22 251 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 ADAMTS10Q9H324 1103 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 TRPC4Q9UBN4 977 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 GTF2IRD1Q9UHL9 959 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 PTBP2Q9UKA9 531 aaKnown RBP16.48■□□□□ 0.23
TCOF1-206ENST00000445265 C9IYK1 514 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 J3KR12 359 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 PRAMEF1O95521 474 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 GRK3P35626 688 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 GJA9P57773 515 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 GRB14Q14449 540 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 ZBED5Q49AG3 693 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 FGD3Q5JSP0 725 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 DET1Q7L5Y6 550 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 KBTBD7Q8WVZ9 684 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 UBE2E3Q969T4 207 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 HBEGFQ99075 208 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 NUAK2Q9H093 628 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 HMX1Q9NP08 348 aaPredicted RBP16.48■□□□□ 0.23
TCOF1-206ENST00000445265 ZIM2Q9NZV7 527 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 H3BN98 237 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 BCKDKO14874 412 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 NADKO95544 446 aaPredicted RBP16.48■□□□□ 0.23
TCOF1-206ENST00000445265 IL6P05231 212 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 CCDC159P0C7I6 412 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 PABPC1P11940 636 aaKnown RBP16.48■□□□□ 0.23
TCOF1-206ENST00000445265 CLCN2P51788 898 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 AP1S1P61966 158 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 SULT1C3Q6IMI6 304 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 CTU1Q7Z7A3 348 aaKnown RBP16.48■□□□□ 0.23
TCOF1-206ENST00000445265 ESAMQ96AP7 390 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 AARSD1Q9BTE6 412 aaKnown RBP16.48■□□□□ 0.23
TCOF1-206ENST00000445265 TMEM245Q9H330 911 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 FANCEQ9HB96 536 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 EURLQ9NYK6 297 aa16.48■□□□□ 0.23
TCOF1-206ENST00000445265 LOC100506127A0A0U1RQW1 187 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 PQBP1O60828 265 aaKnown RBP16.47■□□□□ 0.23
TCOF1-206ENST00000445265 BEST1O76090 585 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 IGFBP5P24593 272 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 ACOX1Q15067 660 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 ANXA8L1Q5VT79 327 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 KBTBD2Q8IY47 623 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 FBXO27Q8NI29 283 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 CARNS1A5YM72 827 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 GLTPD2A6NH11 291 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 NT5C1B-RDH14C9J2C7 533 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 SUV39H1O43463 412 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 ECI2O75521 394 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 PFKMP08237 780 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms