RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 TNFAIP1Q13829 316 aa4.43□□□□□ -1.7
HMGB3P6-201ENST00000444896 KRTCAP3Q53RY4 240 aa4.43□□□□□ -1.7
HMGB3P6-201ENST00000444896 FAM122CQ6P4D5 195 aa4.43□□□□□ -1.7
HMGB3P6-201ENST00000444896 PAPD4Q6PIY7 484 aaKnown RBP4.43□□□□□ -1.7
HMGB3P6-201ENST00000444896 C16orf54Q6UWD8 224 aa4.43□□□□□ -1.7
HMGB3P6-201ENST00000444896 GFRALQ6UXV0 394 aa4.43□□□□□ -1.7
HMGB3P6-201ENST00000444896 TMEM219Q86XT9 240 aa4.43□□□□□ -1.7
HMGB3P6-201ENST00000444896 C17orf53Q8N3J3 647 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P6-201ENST00000444896 SLC44A1Q8WWI5 657 aa4.43□□□□□ -1.7
HMGB3P6-201ENST00000444896 TMEM19Q96HH6 336 aa4.43□□□□□ -1.7
HMGB3P6-201ENST00000444896 GFI1Q99684 422 aa4.43□□□□□ -1.7
HMGB3P6-201ENST00000444896 C1QTNF4Q9BXJ3 329 aa4.43□□□□□ -1.7
HMGB3P6-201ENST00000444896 KRTAP17-1Q9BYP8 105 aa4.43□□□□□ -1.7
HMGB3P6-201ENST00000444896 TRMT1Q9NXH9 659 aaKnown RBP4.43□□□□□ -1.7
HMGB3P6-201ENST00000444896 WSB2Q9NYS7 404 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P6-201ENST00000444896 MALT1Q9UDY8 824 aa4.43□□□□□ -1.7
HMGB3P6-201ENST00000444896 STK39Q9UEW8 545 aa4.43□□□□□ -1.7
HMGB3P6-201ENST00000444896 SEC63Q9UGP8 760 aaKnown RBP4.43□□□□□ -1.7
HMGB3P6-201ENST00000444896 FBXL2Q9UKC9 423 aa4.43□□□□□ -1.7
HMGB3P6-201ENST00000444896 KLHL20Q9Y2M5 609 aa4.43□□□□□ -1.7
HMGB3P6-201ENST00000444896 TMEM184BQ9Y519 407 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P6-201ENST00000444896 PRAG1Q86YV5 1406 aa4.43□□□□□ -1.7
HMGB3P6-201ENST00000444896 PTPRCP08575 1304 aa4.43□□□□□ -1.7
HMGB3P6-201ENST00000444896 CAMSAP2Q08AD1 1489 aa4.43□□□□□ -1.7
HMGB3P6-201ENST00000444896 A0A1W2PP11 408 aa4.42□□□□□ -1.7
HMGB3P6-201ENST00000444896 OR2A25A4D2G3 310 aa4.42□□□□□ -1.7
HMGB3P6-201ENST00000444896 LILRA5A6NI73 299 aa4.42□□□□□ -1.7
HMGB3P6-201ENST00000444896 EIF4E1BA6NMX2 242 aaKnown RBP4.42□□□□□ -1.7
HMGB3P6-201ENST00000444896 HNRNPCL2B2RXH8 293 aa4.42□□□□□ -1.7
HMGB3P6-201ENST00000444896 MAP2K7O14733 419 aa4.42□□□□□ -1.7
HMGB3P6-201ENST00000444896 GPC4O75487 556 aa4.42□□□□□ -1.7
HMGB3P6-201ENST00000444896 TSPAN9O75954 239 aa4.42□□□□□ -1.7
HMGB3P6-201ENST00000444896 TMPOP42166 694 aaKnown RBP4.42□□□□□ -1.7
HMGB3P6-201ENST00000444896 RUNX1T1Q06455 604 aa4.42□□□□□ -1.7
HMGB3P6-201ENST00000444896 LRMPQ12912 555 aa4.42□□□□□ -1.7
HMGB3P6-201ENST00000444896 PDE1CQ14123 709 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P6-201ENST00000444896 SLC39A14Q15043 492 aa4.42□□□□□ -1.7
HMGB3P6-201ENST00000444896 DLG2Q15700 870 aa4.42□□□□□ -1.7
HMGB3P6-201ENST00000444896 CEP97Q8IW35 865 aa4.42□□□□□ -1.7
HMGB3P6-201ENST00000444896 SCYL3Q8IZE3 742 aa4.42□□□□□ -1.7
HMGB3P6-201ENST00000444896 RNF113BQ8IZP6 322 aaKnown RBP4.42□□□□□ -1.7
HMGB3P6-201ENST00000444896 SLC38A9Q8NBW4 561 aa4.42□□□□□ -1.7
HMGB3P6-201ENST00000444896 C1orf131Q8NDD1 294 aaKnown RBP4.42□□□□□ -1.7
HMGB3P6-201ENST00000444896 THAP6Q8TBB0 222 aa4.42□□□□□ -1.7
HMGB3P6-201ENST00000444896 FIG4Q92562 907 aa4.42□□□□□ -1.7
HMGB3P6-201ENST00000444896 PIGTQ969N2 578 aa4.42□□□□□ -1.7
HMGB3P6-201ENST00000444896 CALML4Q96GE6 196 aa4.42□□□□□ -1.7
HMGB3P6-201ENST00000444896 SMC6Q96SB8 1091 aa4.42□□□□□ -1.7
HMGB3P6-201ENST00000444896 C1QTNF1Q9BXJ1 281 aa4.42□□□□□ -1.7
HMGB3P6-201ENST00000444896 TMEM39BQ9GZU3 492 aa4.42□□□□□ -1.7
HMGB3P6-201ENST00000444896 CSTL1Q9H114 145 aa4.42□□□□□ -1.7
HMGB3P6-201ENST00000444896 SIL1Q9H173 461 aa4.42□□□□□ -1.7
HMGB3P6-201ENST00000444896 C6orf106Q9H6K1 298 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P6-201ENST00000444896 LRRC4Q9HBW1 653 aa4.42□□□□□ -1.7
HMGB3P6-201ENST00000444896 PADI1Q9ULC6 663 aa4.42□□□□□ -1.7
HMGB3P6-201ENST00000444896 EXO1Q9UQ84 846 aaKnown RBP4.42□□□□□ -1.7
HMGB3P6-201ENST00000444896 CGNL1Q0VF96 1302 aa4.42□□□□□ -1.7
HMGB3P6-201ENST00000444896 CROCC2H7BZ55 1655 aa4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 ABCA8O94911 1581 aa4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 ABCC5O15440 1437 aa4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 TMEM8BA6NDV4 472 aa4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 TULP2O00295 520 aa4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 HS3ST1O14792 307 aa4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 MITFO75030 526 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 LDB3O75112 727 aa4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 ZNF217O75362 1048 aa4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 FGF3P11487 239 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 HRH2P25021 359 aa4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 SLC15A1P46059 708 aa4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 MFAP4P55083 255 aa4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 ISL1P61371 349 aa4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 RELQ04864 619 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 EEF1A2Q05639 463 aaKnown RBP4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 ILF3Q12906 894 aaKnown RBP eCLIP4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 COASYQ13057 564 aa4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 ZBTB17Q13105 803 aa4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 SYT16Q17RD7 645 aa4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 MYLK3Q32MK0 819 aa4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 AACSQ86V21 672 aa4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 TMPRSS12Q86WS5 348 aa4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 POC5Q8NA72 575 aa4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 IL17RCQ8NAC3 791 aa4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 SORCS1Q8WY21 1168 aa4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 SAT2Q96F10 170 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 QRFPRQ96P65 431 aa4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 MXD3Q9BW11 206 aa4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 MAK16Q9BXY0 300 aaKnown RBP4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 UBTD1Q9HAC8 227 aa4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 EBF2Q9HAK2 575 aa4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 SWAP70Q9UH65 585 aa4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 TSPYL4Q9UJ04 414 aa4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 ZNF580Q9UK33 172 aa4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 B3GALT5Q9Y2C3 310 aa4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 AMDHD2Q9Y303 409 aa4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 OR2W1Q9Y3N9 320 aa4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 ADGRL2O95490 1459 aa4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 PLB1Q6P1J6 1458 aa4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 SHANK2Q9UPX8 1470 aa4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 CNTNAP2Q9UHC6 1331 aa4.41□□□□□ -1.7
HMGB3P6-201ENST00000444896 PRG4Q92954 1404 aaPredicted RBP4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms