RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 AGAP14A8MT82 685 aa17.21■□□□□ 0.35
SMARCAL1-209ENST00000444508 CFAP99D6REC4 459 aa17.21■□□□□ 0.35
SMARCAL1-209ENST00000444508 OPA1O60313 960 aa17.21■□□□□ 0.35
SMARCAL1-209ENST00000444508 SLC2A4P14672 509 aa17.21■□□□□ 0.35
SMARCAL1-209ENST00000444508 GLB1P16278 677 aa17.21■□□□□ 0.35
SMARCAL1-209ENST00000444508 PSMA3P25788 255 aa17.21■□□□□ 0.35
SMARCAL1-209ENST00000444508 CA5AP35218 305 aa17.21■□□□□ 0.35
SMARCAL1-209ENST00000444508 CACNG1Q06432 222 aa17.21■□□□□ 0.35
SMARCAL1-209ENST00000444508 HLTFQ14527 1009 aaKnown RBP eCLIP17.21■□□□□ 0.35
SMARCAL1-209ENST00000444508 PERM1Q5SV97 790 aa17.21■□□□□ 0.35
SMARCAL1-209ENST00000444508 HES3Q5TGS1 186 aa17.21■□□□□ 0.35
SMARCAL1-209ENST00000444508 TMEM220Q6QAJ8 160 aa17.21■□□□□ 0.35
SMARCAL1-209ENST00000444508 RASGEF1AQ8N9B8 481 aa17.21■□□□□ 0.35
SMARCAL1-209ENST00000444508 CPT1BQ92523 772 aa17.21■□□□□ 0.35
SMARCAL1-209ENST00000444508 SLCO2A1Q92959 643 aa17.21■□□□□ 0.35
SMARCAL1-209ENST00000444508 PEX13Q92968 403 aa17.21■□□□□ 0.35
SMARCAL1-209ENST00000444508 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.21■□□□□ 0.35
SMARCAL1-209ENST00000444508 CCDC74AQ96AQ1 378 aa17.21■□□□□ 0.35
SMARCAL1-209ENST00000444508 CCDC3Q9BQI4 270 aa17.21■□□□□ 0.35
SMARCAL1-209ENST00000444508 OR2AG2A6NM03 316 aa17.2■□□□□ 0.34
SMARCAL1-209ENST00000444508 SNX2O60749 519 aa17.2■□□□□ 0.34
SMARCAL1-209ENST00000444508 JUPP14923 745 aa17.2■□□□□ 0.34
SMARCAL1-209ENST00000444508 ARSDP51689 593 aa17.2■□□□□ 0.34
SMARCAL1-209ENST00000444508 CLCNKAP51800 687 aa17.2■□□□□ 0.34
SMARCAL1-209ENST00000444508 INSM1Q01101 510 aaPredicted RBP17.2■□□□□ 0.34
SMARCAL1-209ENST00000444508 DR1Q01658 176 aa17.2■□□□□ 0.34
SMARCAL1-209ENST00000444508 PTK6Q13882 451 aa17.2■□□□□ 0.34
SMARCAL1-209ENST00000444508 ANKRD22Q5VYY1 191 aa17.2■□□□□ 0.34
SMARCAL1-209ENST00000444508 AFTPHQ6ULP2 937 aa17.2■□□□□ 0.34
SMARCAL1-209ENST00000444508 SYDE1Q6ZW31 735 aaPredicted RBP17.2■□□□□ 0.34
SMARCAL1-209ENST00000444508 ZNF534Q76KX8 674 aa17.2■□□□□ 0.34
SMARCAL1-209ENST00000444508 DET1Q7L5Y6 550 aa17.2■□□□□ 0.34
SMARCAL1-209ENST00000444508 SERPINA9Q86WD7 417 aa17.2■□□□□ 0.34
SMARCAL1-209ENST00000444508 ZNF547Q8IVP9 402 aa17.2■□□□□ 0.34
SMARCAL1-209ENST00000444508 SFTPA2Q8IWL1 248 aa17.2■□□□□ 0.34
SMARCAL1-209ENST00000444508 NAGSQ8N159 534 aa17.2■□□□□ 0.34
SMARCAL1-209ENST00000444508 OR13J1Q8NGT2 312 aa17.2■□□□□ 0.34
SMARCAL1-209ENST00000444508 C16orf45Q96MC5 204 aaPredicted RBP17.2■□□□□ 0.34
SMARCAL1-209ENST00000444508 XAB2Q9HCS7 855 aaKnown RBP17.2■□□□□ 0.34
SMARCAL1-209ENST00000444508 CHRAC1Q9NRG0 131 aa17.2■□□□□ 0.34
SMARCAL1-209ENST00000444508 ZDHHC3Q9NYG2 299 aa17.2■□□□□ 0.34
SMARCAL1-209ENST00000444508 LRIT1Q9P2V4 623 aa17.2■□□□□ 0.34
SMARCAL1-209ENST00000444508 SLC2A6Q9UGQ3 507 aa17.2■□□□□ 0.34
SMARCAL1-209ENST00000444508 DNAJC16Q9Y2G8 782 aa17.2■□□□□ 0.34
SMARCAL1-209ENST00000444508 PTPRBP23467 1997 aa17.2■□□□□ 0.34
SMARCAL1-209ENST00000444508 ASXL3Q9C0F0 2248 aa17.19■□□□□ 0.34
SMARCAL1-209ENST00000444508 TRBV5-4A0A0C4DH59 114 aa17.19■□□□□ 0.34
SMARCAL1-209ENST00000444508 CCDC162PA2VCL2 907 aa17.19■□□□□ 0.34
SMARCAL1-209ENST00000444508 RHPN2P1A8MT19 583 aa17.19■□□□□ 0.34
SMARCAL1-209ENST00000444508 NUDT21O43809 227 aaKnown RBP17.19■□□□□ 0.34
SMARCAL1-209ENST00000444508 KCNJ13O60928 360 aa17.19■□□□□ 0.34
SMARCAL1-209ENST00000444508 MLNP12872 115 aa17.19■□□□□ 0.34
SMARCAL1-209ENST00000444508 ACRV1P26436 265 aa17.19■□□□□ 0.34
SMARCAL1-209ENST00000444508 MGAT1P26572 445 aa17.19■□□□□ 0.34
SMARCAL1-209ENST00000444508 CTSCP53634 463 aa17.19■□□□□ 0.34
SMARCAL1-209ENST00000444508 MAZP56270 477 aaKnown RBP17.19■□□□□ 0.34
SMARCAL1-209ENST00000444508 PRAMEP78395 509 aa17.19■□□□□ 0.34
SMARCAL1-209ENST00000444508 CRADDP78560 199 aa17.19■□□□□ 0.34
SMARCAL1-209ENST00000444508 ACVR1Q04771 509 aa17.19■□□□□ 0.34
SMARCAL1-209ENST00000444508 FNBP1LQ5T0N5 605 aa17.19■□□□□ 0.34
SMARCAL1-209ENST00000444508 AMZ2Q86W34 360 aa17.19■□□□□ 0.34
SMARCAL1-209ENST00000444508 C17orf82Q86X59 251 aaPredicted RBP17.19■□□□□ 0.34
SMARCAL1-209ENST00000444508 PPIL6Q8IXY8 311 aa17.19■□□□□ 0.34
SMARCAL1-209ENST00000444508 ARL14Q8N4G2 192 aa17.19■□□□□ 0.34
SMARCAL1-209ENST00000444508 MCUQ8NE86 351 aa17.19■□□□□ 0.34
SMARCAL1-209ENST00000444508 OR6P1Q8NGX9 317 aa17.19■□□□□ 0.34
SMARCAL1-209ENST00000444508 WDR48Q8TAF3 677 aa17.19■□□□□ 0.34
SMARCAL1-209ENST00000444508 PATE1Q8WXA2 126 aa17.19■□□□□ 0.34
SMARCAL1-209ENST00000444508 HDAC10Q969S8 669 aa17.19■□□□□ 0.34
SMARCAL1-209ENST00000444508 SGF29Q96ES7 293 aa17.19■□□□□ 0.34
SMARCAL1-209ENST00000444508 TTC1Q99614 292 aa17.19■□□□□ 0.34
SMARCAL1-209ENST00000444508 STN1Q9H668 368 aaKnown RBP17.19■□□□□ 0.34
SMARCAL1-209ENST00000444508 SYNDIG1Q9H7V2 258 aa17.19■□□□□ 0.34
SMARCAL1-209ENST00000444508 SAMD15Q9P1V8 674 aa17.19■□□□□ 0.34
SMARCAL1-209ENST00000444508 TBC1D29Q9UFV1 150 aa17.19■□□□□ 0.34
SMARCAL1-209ENST00000444508 SLC23A2Q9UGH3 650 aa17.19■□□□□ 0.34
SMARCAL1-209ENST00000444508 MSRB2Q9Y3D2 182 aa17.19■□□□□ 0.34
SMARCAL1-209ENST00000444508 DNMT3AQ9Y6K1 912 aaPredicted RBP17.19■□□□□ 0.34
SMARCAL1-209ENST00000444508 RNF215Q9Y6U7 377 aa17.19■□□□□ 0.34
SMARCAL1-209ENST00000444508 CHD8Q9HCK8 2581 aa17.19■□□□□ 0.34
SMARCAL1-209ENST00000444508 RP1P56715 2156 aa17.18■□□□□ 0.34
SMARCAL1-209ENST00000444508 FAM221BA6H8Z2 402 aa17.18■□□□□ 0.34
SMARCAL1-209ENST00000444508 OR5K4A6NMS3 321 aa17.18■□□□□ 0.34
SMARCAL1-209ENST00000444508 GOLGA8MH3BSY2 632 aa17.18■□□□□ 0.34
SMARCAL1-209ENST00000444508 ZW10O43264 779 aa17.18■□□□□ 0.34
SMARCAL1-209ENST00000444508 POP7O75817 140 aaKnown RBP17.18■□□□□ 0.34
SMARCAL1-209ENST00000444508 TMEM63AO94886 807 aa17.18■□□□□ 0.34
SMARCAL1-209ENST00000444508 F3P13726 295 aa17.18■□□□□ 0.34
SMARCAL1-209ENST00000444508 PNLIPP16233 465 aa17.18■□□□□ 0.34
SMARCAL1-209ENST00000444508 IDSP22304 550 aa17.18■□□□□ 0.34
SMARCAL1-209ENST00000444508 PTGIRP43119 386 aa17.18■□□□□ 0.34
SMARCAL1-209ENST00000444508 CDKN1CP49918 316 aaPredicted RBP17.18■□□□□ 0.34
SMARCAL1-209ENST00000444508 CLDN6P56747 220 aa17.18■□□□□ 0.34
SMARCAL1-209ENST00000444508 LYPLAL1Q5VWZ2 237 aa17.18■□□□□ 0.34
SMARCAL1-209ENST00000444508 ARMC3Q5W041 872 aa17.18■□□□□ 0.34
SMARCAL1-209ENST00000444508 CASC4Q6P4E1 433 aa17.18■□□□□ 0.34
SMARCAL1-209ENST00000444508 C11orf96Q7Z7L8 435 aa17.18■□□□□ 0.34
SMARCAL1-209ENST00000444508 PCGF5Q86SE9 256 aa17.18■□□□□ 0.34
SMARCAL1-209ENST00000444508 Q8N9G6 341 aaPredicted RBP17.18■□□□□ 0.34
SMARCAL1-209ENST00000444508 OR4L1Q8NH43 312 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms