RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 TRABDQ9H4I3 376 aa11.61□□□□□ -0.55
TTC28-203ENST00000442232 FBXO8Q9NRD0 319 aa11.61□□□□□ -0.55
TTC28-203ENST00000442232 POT1Q9NUX5 634 aa11.61□□□□□ -0.55
TTC28-203ENST00000442232 UBP1Q9NZI7 540 aa11.61□□□□□ -0.55
TTC28-203ENST00000442232 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.61□□□□□ -0.55
TTC28-203ENST00000442232 HACD3Q9P035 362 aa11.61□□□□□ -0.55
TTC28-203ENST00000442232 DNAJC16Q9Y2G8 782 aa11.61□□□□□ -0.55
TTC28-203ENST00000442232 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.61□□□□□ -0.55
TTC28-203ENST00000442232 MN1Q10571 1320 aaPredicted RBP11.6□□□□□ -0.55
TTC28-203ENST00000442232 CHUKO15111 745 aa11.6□□□□□ -0.55
TTC28-203ENST00000442232 CST8O60676 142 aa11.6□□□□□ -0.55
TTC28-203ENST00000442232 MTX2O75431 263 aa11.6□□□□□ -0.55
TTC28-203ENST00000442232 RASSF9O75901 435 aa11.6□□□□□ -0.55
TTC28-203ENST00000442232 UBXN7O94888 489 aa11.6□□□□□ -0.55
TTC28-203ENST00000442232 ANKRD34CP0C6C1 535 aa11.6□□□□□ -0.55
TTC28-203ENST00000442232 XRCC1P18887 633 aaPredicted RBP11.6□□□□□ -0.55
TTC28-203ENST00000442232 NFKB1P19838 968 aa11.6□□□□□ -0.55
TTC28-203ENST00000442232 SPAM1P38567 509 aa11.6□□□□□ -0.55
TTC28-203ENST00000442232 CDKN2BP42772 138 aa11.6□□□□□ -0.55
TTC28-203ENST00000442232 UBE2IP63279 158 aaKnown RBP11.6□□□□□ -0.55
TTC28-203ENST00000442232 MC1RQ01726 317 aa11.6□□□□□ -0.55
TTC28-203ENST00000442232 FOXM1Q08050 763 aa11.6□□□□□ -0.55
TTC28-203ENST00000442232 PRKD1Q15139 912 aaPredicted RBP11.6□□□□□ -0.55
TTC28-203ENST00000442232 PPP2R5EQ16537 467 aa11.6□□□□□ -0.55
TTC28-203ENST00000442232 CCDC181Q5TID7 509 aa11.6□□□□□ -0.55
TTC28-203ENST00000442232 SPOCD1Q6ZMY3 1216 aa11.6□□□□□ -0.55
TTC28-203ENST00000442232 ATG14Q6ZNE5 492 aa11.6□□□□□ -0.55
TTC28-203ENST00000442232 TMEM26Q6ZUK4 368 aa11.6□□□□□ -0.55
TTC28-203ENST00000442232 B4GALNT4Q76KP1 1039 aa11.6□□□□□ -0.55
TTC28-203ENST00000442232 GLT6D1Q7Z4J2 308 aa11.6□□□□□ -0.55
TTC28-203ENST00000442232 BMPERQ8N8U9 685 aa11.6□□□□□ -0.55
TTC28-203ENST00000442232 BRSK1Q8TDC3 778 aa11.6□□□□□ -0.55
TTC28-203ENST00000442232 EID2BQ96D98 161 aa11.6□□□□□ -0.55
TTC28-203ENST00000442232 TEKT5Q96M29 485 aa11.6□□□□□ -0.55
TTC28-203ENST00000442232 VPS35Q96QK1 796 aa11.6□□□□□ -0.55
TTC28-203ENST00000442232 VAT1Q99536 393 aa11.6□□□□□ -0.55
TTC28-203ENST00000442232 FSD1LQ9BXM9 530 aa11.6□□□□□ -0.55
TTC28-203ENST00000442232 SLC12A9Q9BXP2 914 aa11.6□□□□□ -0.55
TTC28-203ENST00000442232 ADNPQ9H2P0 1102 aa11.6□□□□□ -0.55
TTC28-203ENST00000442232 CLMPQ9H6B4 373 aa11.6□□□□□ -0.55
TTC28-203ENST00000442232 BPIFA1Q9NP55 256 aa11.6□□□□□ -0.55
TTC28-203ENST00000442232 PKP3Q9Y446 797 aa11.6□□□□□ -0.55
TTC28-203ENST00000442232 HYOU1Q9Y4L1 999 aa11.6□□□□□ -0.55
TTC28-203ENST00000442232 TENM4Q6N022 2769 aa11.6□□□□□ -0.55
TTC28-203ENST00000442232 HACD1B0YJ81 288 aa11.59□□□□□ -0.55
TTC28-203ENST00000442232 TOX3O15405 576 aaPredicted RBP11.59□□□□□ -0.55
TTC28-203ENST00000442232 STK17BO94768 372 aa11.59□□□□□ -0.55
TTC28-203ENST00000442232 TYRP1P17643 537 aa11.59□□□□□ -0.55
TTC28-203ENST00000442232 WT1P19544 449 aaPredicted RBP11.59□□□□□ -0.55
TTC28-203ENST00000442232 MAGEA1P43355 309 aa11.59□□□□□ -0.55
TTC28-203ENST00000442232 CCR10P46092 362 aa11.59□□□□□ -0.55
TTC28-203ENST00000442232 ARSDP51689 593 aa11.59□□□□□ -0.55
TTC28-203ENST00000442232 WNT3AP56704 352 aa11.59□□□□□ -0.55
TTC28-203ENST00000442232 KCNC4Q03721 635 aa11.59□□□□□ -0.55
TTC28-203ENST00000442232 ABHD18Q0P651 414 aa11.59□□□□□ -0.55
TTC28-203ENST00000442232 ITGA9Q13797 1035 aa11.59□□□□□ -0.55
TTC28-203ENST00000442232 TCEAL1Q15170 157 aa11.59□□□□□ -0.55
TTC28-203ENST00000442232 LDLRAP1Q5SW96 308 aa11.59□□□□□ -0.55
TTC28-203ENST00000442232 PID1Q7Z2X4 250 aa11.59□□□□□ -0.55
TTC28-203ENST00000442232 ZC3H18Q86VM9 953 aaKnown RBP11.59□□□□□ -0.55
TTC28-203ENST00000442232 SLC25A41Q8N5S1 370 aa11.59□□□□□ -0.55
TTC28-203ENST00000442232 ESX1Q8N693 406 aa11.59□□□□□ -0.55
TTC28-203ENST00000442232 RNF214Q8ND24 703 aa11.59□□□□□ -0.55
TTC28-203ENST00000442232 BLOC1S5Q8TDH9 187 aa11.59□□□□□ -0.55
TTC28-203ENST00000442232 HTR3CQ8WXA8 447 aa11.59□□□□□ -0.55
TTC28-203ENST00000442232 TADA1Q96BN2 335 aa11.59□□□□□ -0.55
TTC28-203ENST00000442232 HAUS1Q96CS2 278 aa11.59□□□□□ -0.55
TTC28-203ENST00000442232 ZDHHC12Q96GR4 267 aa11.59□□□□□ -0.55
TTC28-203ENST00000442232 SLC45A3Q96JT2 553 aa11.59□□□□□ -0.55
TTC28-203ENST00000442232 C9orf72Q96LT7 481 aa11.59□□□□□ -0.55
TTC28-203ENST00000442232 TGM7Q96PF1 710 aa11.59□□□□□ -0.55
TTC28-203ENST00000442232 ULBP3Q9BZM4 244 aa11.59□□□□□ -0.55
TTC28-203ENST00000442232 SLC25A18Q9H1K4 315 aa11.59□□□□□ -0.55
TTC28-203ENST00000442232 STARD5Q9NSY2 213 aa11.59□□□□□ -0.55
TTC28-203ENST00000442232 GEMIN8Q9NWZ8 242 aaKnown RBP11.59□□□□□ -0.55
TTC28-203ENST00000442232 RSPH14Q9UHP6 348 aa11.59□□□□□ -0.55
TTC28-203ENST00000442232 PILRAQ9UKJ1 303 aa11.59□□□□□ -0.55
TTC28-203ENST00000442232 SPO11Q9Y5K1 396 aa11.59□□□□□ -0.55
TTC28-203ENST00000442232 ADGRG1Q9Y653 693 aa11.59□□□□□ -0.55
TTC28-203ENST00000442232 FLNBO75369 2602 aaKnown RBP11.58□□□□□ -0.55
TTC28-203ENST00000442232 TLN1Q9Y490 2541 aaKnown RBP11.58□□□□□ -0.56
TTC28-203ENST00000442232 SETXQ7Z333 2677 aaKnown RBP11.58□□□□□ -0.56
TTC28-203ENST00000442232 MACROD2A1Z1Q3 448 aa11.58□□□□□ -0.56
TTC28-203ENST00000442232 F5H423 210 aaPredicted RBP11.58□□□□□ -0.56
TTC28-203ENST00000442232 KCNJ13O60928 360 aa11.58□□□□□ -0.56
TTC28-203ENST00000442232 STK10O94804 968 aaKnown RBP11.58□□□□□ -0.56
TTC28-203ENST00000442232 ZRANB2O95218 330 aaKnown RBP eCLIP11.58□□□□□ -0.56
TTC28-203ENST00000442232 WISP1O95388 367 aa11.58□□□□□ -0.56
TTC28-203ENST00000442232 EPOP01588 193 aa11.58□□□□□ -0.56
TTC28-203ENST00000442232 C9P02748 559 aa11.58□□□□□ -0.56
TTC28-203ENST00000442232 PRKAR1AP10644 381 aa11.58□□□□□ -0.56
TTC28-203ENST00000442232 PECAM1P16284 738 aaPredicted RBP11.58□□□□□ -0.56
TTC28-203ENST00000442232 HLA-DPA1P20036 260 aa11.58□□□□□ -0.56
TTC28-203ENST00000442232 RPL10P27635 214 aaKnown RBP11.58□□□□□ -0.56
TTC28-203ENST00000442232 AKT1P31749 480 aa11.58□□□□□ -0.56
TTC28-203ENST00000442232 HMGCLP35914 325 aa11.58□□□□□ -0.56
TTC28-203ENST00000442232 SLC19A1P41440 591 aa11.58□□□□□ -0.56
TTC28-203ENST00000442232 CAPZBP47756 277 aa11.58□□□□□ -0.56
TTC28-203ENST00000442232 SEPHS1P49903 392 aa11.58□□□□□ -0.56
TTC28-203ENST00000442232 DRG2P55039 364 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms