RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 ZFAND4Q86XD8 727 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 FAM129CQ86XR2 697 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 CACNA2D3Q8IZS8 1091 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 NLGN4XQ8N0W4 816 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 NLGN4YQ8NFZ3 816 aaPredicted RBP7.68□□□□□ -1.18
CD44-211ENST00000442151 HEXDCQ8WVB3 486 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 ZFPM2Q8WW38 1151 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 SEC14L1Q92503 715 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 CXorf40BQ96DE9 158 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 TEKT5Q96M29 485 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 NUDT22Q9BRQ3 303 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 RDH14Q9HBH5 336 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 CPNE7Q9UBL6 633 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 FEZ2Q9UHY8 353 aaPredicted RBP7.68□□□□□ -1.18
CD44-211ENST00000442151 TUBD1Q9UJT1 453 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 PKP3Q9Y446 797 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 ZNF711Q9Y462 761 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 TRBV23OR9-2A0A075B6M9 112 aa7.67□□□□□ -1.18
CD44-211ENST00000442151 RAD1O60671 282 aa7.67□□□□□ -1.18
CD44-211ENST00000442151 ANXA9O76027 345 aa7.67□□□□□ -1.18
CD44-211ENST00000442151 MAP3K6O95382 1288 aa7.67□□□□□ -1.18
CD44-211ENST00000442151 PRB1P04280 392 aa7.67□□□□□ -1.18
CD44-211ENST00000442151 CCNYL3P0C7X3 344 aa7.67□□□□□ -1.18
CD44-211ENST00000442151 RALBP11234 206 aa7.67□□□□□ -1.18
CD44-211ENST00000442151 ZNF7P17097 686 aaPredicted RBP7.67□□□□□ -1.18
CD44-211ENST00000442151 HLA-DPA1P20036 260 aa7.67□□□□□ -1.18
CD44-211ENST00000442151 ABHD18Q0P651 414 aa7.67□□□□□ -1.18
CD44-211ENST00000442151 SLC10A2Q12908 348 aaPredicted RBP7.67□□□□□ -1.18
CD44-211ENST00000442151 MPP3Q13368 585 aa7.67□□□□□ -1.18
CD44-211ENST00000442151 XRCC4Q13426 336 aa7.67□□□□□ -1.18
CD44-211ENST00000442151 SEPT6Q14141 434 aa7.67□□□□□ -1.18
CD44-211ENST00000442151 IL11RAQ14626 422 aa7.67□□□□□ -1.18
CD44-211ENST00000442151 CRTC2Q53ET0 693 aaPredicted RBP7.67□□□□□ -1.18
CD44-211ENST00000442151 TFDP3Q5H9I0 405 aa7.67□□□□□ -1.18
CD44-211ENST00000442151 AGAP9Q5VTM2 703 aa7.67□□□□□ -1.18
CD44-211ENST00000442151 KIAA1614Q5VZ46 1190 aa7.67□□□□□ -1.18
CD44-211ENST00000442151 BORAQ6PGQ7 559 aa7.67□□□□□ -1.18
CD44-211ENST00000442151 ABRAXAS1Q6UWZ7 409 aa7.67□□□□□ -1.18
CD44-211ENST00000442151 ZNF574Q6ZN55 896 aaPredicted RBP7.67□□□□□ -1.18
CD44-211ENST00000442151 ATG14Q6ZNE5 492 aa7.67□□□□□ -1.18
CD44-211ENST00000442151 PID1Q7Z2X4 250 aa7.67□□□□□ -1.18
CD44-211ENST00000442151 KDELC2Q7Z4H8 507 aa7.67□□□□□ -1.18
CD44-211ENST00000442151 TRIM46Q7Z4K8 759 aa7.67□□□□□ -1.18
CD44-211ENST00000442151 PELI3Q8N2H9 469 aa7.67□□□□□ -1.18
CD44-211ENST00000442151 ESX1Q8N693 406 aa7.67□□□□□ -1.18
CD44-211ENST00000442151 GDAP1Q8TB36 358 aa7.67□□□□□ -1.18
CD44-211ENST00000442151 ART4Q93070 314 aa7.67□□□□□ -1.18
CD44-211ENST00000442151 FCRL4Q96PJ5 515 aa7.67□□□□□ -1.18
CD44-211ENST00000442151 OR2AG1Q9H205 316 aa7.67□□□□□ -1.18
CD44-211ENST00000442151 OSGEPL1Q9H4B0 414 aa7.67□□□□□ -1.18
CD44-211ENST00000442151 KLC4Q9NSK0 619 aa7.67□□□□□ -1.18
CD44-211ENST00000442151 POT1Q9NUX5 634 aa7.67□□□□□ -1.18
CD44-211ENST00000442151 KLHL8Q9P2G9 620 aaPredicted RBP7.67□□□□□ -1.18
CD44-211ENST00000442151 ATXN10Q9UBB4 475 aa7.67□□□□□ -1.18
CD44-211ENST00000442151 CNOT6Q9ULM6 557 aaKnown RBP7.67□□□□□ -1.18
CD44-211ENST00000442151 EFR3BQ9Y2G0 817 aa7.67□□□□□ -1.18
CD44-211ENST00000442151 AAR2Q9Y312 384 aaKnown RBP7.67□□□□□ -1.18
CD44-211ENST00000442151 UNC13CQ8NB66 2214 aa7.67□□□□□ -1.18
CD44-211ENST00000442151 LRP4O75096 1905 aa7.67□□□□□ -1.18
CD44-211ENST00000442151 C2orf81A6NN90 581 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 PDZK1P1A8MUH7 402 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 F8W8V4 182 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 CHUKO15111 745 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 CST8O60676 142 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 MFAP3LO75121 409 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 RECKO95980 971 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 ATP1A1P05023 1023 aaKnown RBP7.66□□□□□ -1.18
CD44-211ENST00000442151 MMP2P08253 660 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 ANKRD34CP0C6C1 535 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 CTNNA2P26232 953 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 HMGCLP35914 325 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 ETV5P41161 510 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 MAPK9P45984 424 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 GEMP55040 296 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 NFATC2Q13469 925 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 GALNT3Q14435 633 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 PCSK7Q16549 785 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 SNAP47Q5SQN1 464 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 NKAIN2Q5VXU1 208 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 KCTD16Q68DU8 428 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 RFLNAQ6ZTI6 216 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 TMEM26Q6ZUK4 368 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 ARHGAP22Q7Z5H3 698 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 NKD1Q969G9 470 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 TADA1Q96BN2 335 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 OLFM3Q96PB7 478 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 FCRL5Q96RD9 977 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 AGAP2Q99490 1192 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 C19orf43Q9BQ61 176 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 RAB33BQ9H082 229 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 GPN2Q9H9Y4 310 aaPredicted RBP7.66□□□□□ -1.18
CD44-211ENST00000442151 GEMIN8Q9NWZ8 242 aaKnown RBP7.66□□□□□ -1.18
CD44-211ENST00000442151 TBC1D29Q9UFV1 150 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 KCND3Q9UK17 655 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 KCNK6Q9Y257 313 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 PLEKHM1Q9Y4G2 1056 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 NBEAQ8NFP9 2946 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 FADS2P1A8MWK0 482 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 STX7O15400 261 aaKnown RBP7.66□□□□□ -1.18
CD44-211ENST00000442151 PSMD3O43242 534 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms