RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 AP2M1Q96CW1 435 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 C6orf106Q9H6K1 298 aaPredicted RBP7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 ABCA7Q8IZY2 2146 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 CCDC163A0A0D9SF12 145 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 RHPN2P1A8MT19 583 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 PATE3B3GLJ2 98 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 K7EQS6 105 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 COPEO14579 308 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 PIRTP0C851 137 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 JUNDP17535 347 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 ITGAXP20702 1163 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 CNTFP26441 200 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 HALP42357 657 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 SGSHP51688 502 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 THOC5Q13769 683 aaKnown RBP7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 PAFAH1B3Q15102 231 aaKnown RBP7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 RSPO4Q2I0M5 234 aaPredicted RBP7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 TRMT5Q32P41 509 aaKnown RBP7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 AMZ1Q400G9 498 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 ZNF805Q5CZA5 627 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 ZRANB3Q5FWF4 1079 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 STPG1Q5TH74 334 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 NADSYN1Q6IA69 706 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 PSAPL1Q6NUJ1 521 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 TMEM135Q86UB9 458 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 HORMAD1Q86X24 394 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 SFTPA1Q8IWL2 248 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 SCUBE1Q8IWY4 988 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 TP53INP2Q8IXH6 220 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 EID2Q8N6I1 236 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 ACVR1CQ8NER5 493 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 MAPK15Q8TD08 544 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 MYO19Q96H55 970 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 CNDP1Q96KN2 507 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 TRAPPC9Q96Q05 1148 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 SLC17A9Q9BYT1 436 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 KLC2Q9H0B6 622 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 S100A14Q9HCY8 104 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 SARS2Q9NP81 518 aaKnown RBP7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 SPASTQ9UBP0 616 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 PCDHGA5Q9Y5G8 931 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 DOCK4Q8N1I0 1966 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 LTBP2Q14767 1821 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 ANKRD36A6QL64 1941 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 IGLON5A6NGN9 336 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 PRAMEF26H0Y7S4 382 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 PIGNO95427 931 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 LYNP07948 512 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 TCF3P15923 654 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 ENGP17813 658 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 HNRNPA2B1P22626 353 aaKnown RBP7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 RPL26P61254 145 aaKnown RBP7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 IL10RBQ08334 325 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 SFT2D3Q587I9 215 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 UGT2A3Q6UWM9 527 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 LAYNQ6UX15 382 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 ASCL5Q7RTU5 278 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 KIAA1958Q8N8K9 716 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 WFDC5Q8TCV5 224 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 NETO1Q8TDF5 533 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 RAB7BQ96AH8 199 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 SLC39A13Q96H72 371 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 TUBGCP5Q96RT8 1024 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 ECSITQ9BQ95 431 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 RBM38Q9H0Z9 239 aaKnown RBP7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 RCOR3Q9P2K3 495 aaPredicted RBP7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 RAI2Q9Y5P3 530 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 B2RBV5 119 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 J3KR12 359 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 SMAD6O43541 496 aaKnown RBP7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 TSPAN6O43657 245 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 INHBAP08476 426 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 CD27P26842 260 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 ALDH4A1P30038 563 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 HOXC13P31276 330 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 GEMP55040 296 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 ZXDBP98169 803 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 NAB1Q13506 487 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 RALGPS1Q5JS13 557 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 OGFRL1Q5TC84 451 aaPredicted RBP7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 BRAT1Q6PJG6 821 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 ZNF783Q6ZMS7 281 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 ZCCHC23Q6ZST2 131 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 PSTKQ8IV42 348 aaKnown RBP7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 PLD6Q8N2A8 252 aaKnown RBP7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 OXR1Q8N573 874 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 PPM1NQ8N819 430 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 CFAP36Q96G28 342 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 LRIG1Q96JA1 1093 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 CCDC28BQ9BUN5 200 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 ZCCHC2Q9C0B9 1178 aaKnown RBP7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 EPB41L1Q9H4G0 881 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 CARS2Q9HA77 564 aaKnown RBP7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 XAB2Q9HCS7 855 aaKnown RBP7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 TMEM248Q9NWD8 314 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 KLQ9UEF7 1012 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 TPP1O14773 563 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 KDELR3O43731 214 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 SLC25A14O95258 325 aaPredicted RBP7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 PRDX6P30041 224 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms