RNA–Protein interactions for RNA: ENST00000440731.4

PGBD4P3-201, Transcript of piggyBac transposable element derived 4 pseudogene 3, humanhuman

BASIC

Gene PGBD4P3, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4P3-201ENST00000440731 AHRP35869 848 aa3.42□□□□□ -1.86
PGBD4P3-201ENST00000440731 MMP14P50281 582 aa3.42□□□□□ -1.86
PGBD4P3-201ENST00000440731 RPL24P83731 157 aaKnown RBP3.42□□□□□ -1.86
PGBD4P3-201ENST00000440731 PPP2R2BQ00005 443 aa3.42□□□□□ -1.86
PGBD4P3-201ENST00000440731 IKQ13123 557 aaPredicted RBP3.42□□□□□ -1.86
PGBD4P3-201ENST00000440731 DDX10Q13206 875 aaKnown RBP3.42□□□□□ -1.86
PGBD4P3-201ENST00000440731 MAMLD1Q13495 774 aa3.42□□□□□ -1.86
PGBD4P3-201ENST00000440731 ACVR2BQ13705 512 aa3.42□□□□□ -1.86
PGBD4P3-201ENST00000440731 EIF4A2Q14240 407 aaKnown RBP3.42□□□□□ -1.86
PGBD4P3-201ENST00000440731 KRTAP27-1Q3LI81 207 aa3.42□□□□□ -1.86
PGBD4P3-201ENST00000440731 ACSM2BQ68CK6 577 aa3.42□□□□□ -1.86
PGBD4P3-201ENST00000440731 KRTAP5-4Q6L8H1 288 aa3.42□□□□□ -1.86
PGBD4P3-201ENST00000440731 FAM180BQ6P0A1 224 aa3.42□□□□□ -1.86
PGBD4P3-201ENST00000440731 CLEC17AQ6ZS10 378 aa3.42□□□□□ -1.86
PGBD4P3-201ENST00000440731 PIWIL4Q7Z3Z4 852 aaKnown RBP3.42□□□□□ -1.86
PGBD4P3-201ENST00000440731 RNF168Q8IYW5 571 aaPredicted RBP3.42□□□□□ -1.86
PGBD4P3-201ENST00000440731 TMTC2Q8N394 836 aa3.42□□□□□ -1.86
PGBD4P3-201ENST00000440731 RBM15BQ8NDT2 890 aaKnown RBP3.42□□□□□ -1.86
PGBD4P3-201ENST00000440731 GRAPLQ8TC17 118 aaPredicted RBP3.42□□□□□ -1.86
PGBD4P3-201ENST00000440731 HES6Q96HZ4 224 aa3.42□□□□□ -1.86
PGBD4P3-201ENST00000440731 NAP1L4Q99733 375 aaKnown RBP3.42□□□□□ -1.86
PGBD4P3-201ENST00000440731 TMEM39BQ9GZU3 492 aa3.42□□□□□ -1.86
PGBD4P3-201ENST00000440731 SEMA6AQ9H2E6 1030 aa3.42□□□□□ -1.86
PGBD4P3-201ENST00000440731 EIF2B3Q9NR50 452 aaKnown RBP3.42□□□□□ -1.86
PGBD4P3-201ENST00000440731 DBNLQ9UJU6 430 aaKnown RBP3.42□□□□□ -1.86
PGBD4P3-201ENST00000440731 ARHGEF40Q8TER5 1519 aa3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 FAM72CH0Y354 149 aa3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 TMEM189-UBE2V1I3L0A0 370 aa3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 CIDEAO60543 219 aa3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 CTSVO60911 334 aa3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 AMBPP02760 352 aa3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 HIST1H2ABP04908 130 aa3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 NR1D1P20393 614 aa3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 HIST1H2ADP20671 130 aa3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 HRH2P25021 359 aa3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 PSMA4P25789 261 aaKnown RBP3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 MLLT10P55197 1068 aa3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 RUNX1T1Q06455 604 aa3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 UBE2V1Q13404 147 aa3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 ASPRV1Q53RT3 343 aa3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 FAM72AQ5TYM5 149 aa3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 SNX30Q5VWJ9 437 aa3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 FAM72DQ6L9T8 149 aa3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 SLC27A1Q6PCB7 646 aa3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 CEACAM20Q6UY09 585 aa3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 HIST3H2AQ7L7L0 130 aa3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 ATG9AQ7Z3C6 839 aa3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 FAM72BQ86X60 149 aa3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 PM20D2Q8IYS1 436 aa3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 WDTC1Q8N5D0 677 aa3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 RDM1Q8NG50 284 aa3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 USP6NLQ92738 828 aa3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 NEUROD6Q96NK8 337 aa3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 PSD2Q9BQI7 771 aa3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 ITPAQ9BY32 194 aa3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 PLK3Q9H4B4 646 aa3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 RAD21L1Q9H4I0 556 aa3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 TFB2MQ9H5Q4 396 aaKnown RBP3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 BICC1Q9H694 974 aaKnown RBP3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 SEPT11Q9NVA2 429 aaKnown RBP3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 UBA2Q9UBT2 640 aaPredicted RBP3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 TCF19Q9Y242 345 aa3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 SESN1Q9Y6P5 492 aa3.41□□□□□ -1.86
PGBD4P3-201ENST00000440731 TDRD9Q8NDG6 1382 aaKnown RBP3.4□□□□□ -1.86
PGBD4P3-201ENST00000440731 A0A1W2PP11 408 aa3.4□□□□□ -1.87
PGBD4P3-201ENST00000440731 CTAGE9A4FU28 777 aa3.4□□□□□ -1.87
PGBD4P3-201ENST00000440731 PMS2P5A8MQ11 134 aa3.4□□□□□ -1.87
PGBD4P3-201ENST00000440731 ANKRD66B4E2M5 251 aa3.4□□□□□ -1.87
PGBD4P3-201ENST00000440731 J3QR06 171 aa3.4□□□□□ -1.87
PGBD4P3-201ENST00000440731 OGG1O15527 345 aa3.4□□□□□ -1.87
PGBD4P3-201ENST00000440731 HS6ST1O60243 411 aa3.4□□□□□ -1.87
PGBD4P3-201ENST00000440731 USO1O60763 962 aaKnown RBP3.4□□□□□ -1.87
PGBD4P3-201ENST00000440731 DDX58O95786 925 aaKnown RBP3.4□□□□□ -1.87
PGBD4P3-201ENST00000440731 TFAP2AP05549 437 aa3.4□□□□□ -1.87
PGBD4P3-201ENST00000440731 LIPFP07098 398 aa3.4□□□□□ -1.87
PGBD4P3-201ENST00000440731 CENPBP07199 599 aaPredicted RBP3.4□□□□□ -1.87
PGBD4P3-201ENST00000440731 CTAGE8P0CG41 777 aa3.4□□□□□ -1.87
PGBD4P3-201ENST00000440731 FGF5P12034 268 aa3.4□□□□□ -1.87
PGBD4P3-201ENST00000440731 CSF2RAP15509 400 aa3.4□□□□□ -1.87
PGBD4P3-201ENST00000440731 CD53P19397 219 aa3.4□□□□□ -1.87
PGBD4P3-201ENST00000440731 MAPK4P31152 587 aa3.4□□□□□ -1.87
PGBD4P3-201ENST00000440731 CAMPP49913 170 aa3.4□□□□□ -1.87
PGBD4P3-201ENST00000440731 CRIP2P52943 208 aaPredicted RBP3.4□□□□□ -1.87
PGBD4P3-201ENST00000440731 PRAMEP78395 509 aa3.4□□□□□ -1.87
PGBD4P3-201ENST00000440731 MBTD1Q05BQ5 628 aa3.4□□□□□ -1.87
PGBD4P3-201ENST00000440731 MEP1AQ16819 746 aa3.4□□□□□ -1.87
PGBD4P3-201ENST00000440731 SFMBT2Q5VUG0 894 aa3.4□□□□□ -1.87
PGBD4P3-201ENST00000440731 LCN10Q6JVE6 187 aa3.4□□□□□ -1.87
PGBD4P3-201ENST00000440731 TMEM154Q6P9G4 183 aa3.4□□□□□ -1.87
PGBD4P3-201ENST00000440731 PLXDC2Q6UX71 529 aa3.4□□□□□ -1.87
PGBD4P3-201ENST00000440731 LONP2Q86WA8 852 aa3.4□□□□□ -1.87
PGBD4P3-201ENST00000440731 FOXP4Q8IVH2 680 aaPredicted RBP3.4□□□□□ -1.87
PGBD4P3-201ENST00000440731 CTAGE4Q8IX94 777 aa3.4□□□□□ -1.87
PGBD4P3-201ENST00000440731 NGEFQ8N5V2 710 aa3.4□□□□□ -1.87
PGBD4P3-201ENST00000440731 C1orf52Q8N6N3 182 aaKnown RBP3.4□□□□□ -1.87
PGBD4P3-201ENST00000440731 STPG4Q8N801 248 aa3.4□□□□□ -1.87
PGBD4P3-201ENST00000440731 ANKRD52Q8NB46 1076 aa3.4□□□□□ -1.87
PGBD4P3-201ENST00000440731 OR10V1Q8NGI7 309 aa3.4□□□□□ -1.87
PGBD4P3-201ENST00000440731 SCFD2Q8WU76 684 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms