RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 PCDHB11Q9Y5F2 797 aa19.6■□□□□ 0.73
SHROOM1-204ENST00000440118 ZNF106Q9H2Y7 1883 aaKnown RBP19.59■□□□□ 0.73
SHROOM1-204ENST00000440118 GLYATL1P3A0A0U1RQE8 302 aa19.59■□□□□ 0.73
SHROOM1-204ENST00000440118 NVLO15381 856 aaKnown RBP19.59■□□□□ 0.73
SHROOM1-204ENST00000440118 LIMK2P53671 638 aa19.59■□□□□ 0.73
SHROOM1-204ENST00000440118 ATP13A5Q4VNC0 1218 aa19.59■□□□□ 0.73
SHROOM1-204ENST00000440118 TAF1BQ53T94 588 aaPredicted RBP19.59■□□□□ 0.73
SHROOM1-204ENST00000440118 IYDQ6PHW0 289 aa19.59■□□□□ 0.73
SHROOM1-204ENST00000440118 FAM129CQ86XR2 697 aa19.59■□□□□ 0.73
SHROOM1-204ENST00000440118 AGBL5Q8NDL9 886 aa19.59■□□□□ 0.73
SHROOM1-204ENST00000440118 PPP1R2P1Q96PQ5 205 aa19.59■□□□□ 0.73
SHROOM1-204ENST00000440118 VPS35Q96QK1 796 aa19.59■□□□□ 0.73
SHROOM1-204ENST00000440118 PRDM8Q9NQV8 689 aa19.59■□□□□ 0.73
SHROOM1-204ENST00000440118 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.59■□□□□ 0.73
SHROOM1-204ENST00000440118 IMPACTQ9P2X3 320 aa19.59■□□□□ 0.73
SHROOM1-204ENST00000440118 CPNE7Q9UBL6 633 aa19.59■□□□□ 0.73
SHROOM1-204ENST00000440118 AAR2Q9Y312 384 aaKnown RBP19.59■□□□□ 0.73
SHROOM1-204ENST00000440118 STX7O15400 261 aaKnown RBP19.58■□□□□ 0.72
SHROOM1-204ENST00000440118 BUD23O43709 281 aaKnown RBP19.58■□□□□ 0.72
SHROOM1-204ENST00000440118 ZNF189O75820 626 aaPredicted RBP19.58■□□□□ 0.72
SHROOM1-204ENST00000440118 THRAP10827 490 aa19.58■□□□□ 0.72
SHROOM1-204ENST00000440118 LIPCP11150 499 aa19.58■□□□□ 0.72
SHROOM1-204ENST00000440118 ZNF7P17097 686 aaPredicted RBP19.58■□□□□ 0.72
SHROOM1-204ENST00000440118 PSMB4P28070 264 aa19.58■□□□□ 0.72
SHROOM1-204ENST00000440118 AKT1P31749 480 aa19.58■□□□□ 0.72
SHROOM1-204ENST00000440118 ETV5P41161 510 aa19.58■□□□□ 0.72
SHROOM1-204ENST00000440118 ITGA9Q13797 1035 aa19.58■□□□□ 0.72
SHROOM1-204ENST00000440118 TMEM71Q6P5X7 295 aa19.58■□□□□ 0.72
SHROOM1-204ENST00000440118 TTC30BQ8N4P2 665 aa19.58■□□□□ 0.72
SHROOM1-204ENST00000440118 ALG3Q92685 438 aa19.58■□□□□ 0.72
SHROOM1-204ENST00000440118 BBC3Q96PG8 261 aaPredicted RBP19.58■□□□□ 0.72
SHROOM1-204ENST00000440118 CCNL2Q96S94 520 aaPredicted RBP19.58■□□□□ 0.72
SHROOM1-204ENST00000440118 TIMM29Q9BSF4 260 aa19.58■□□□□ 0.72
SHROOM1-204ENST00000440118 MIF4GDA9UHW6 222 aaKnown RBP19.57■□□□□ 0.72
SHROOM1-204ENST00000440118 CHUKO15111 745 aa19.57■□□□□ 0.72
SHROOM1-204ENST00000440118 ATXN7O15265 892 aaPredicted RBP19.57■□□□□ 0.72
SHROOM1-204ENST00000440118 PPFIA2O75334 1257 aa19.57■□□□□ 0.72
SHROOM1-204ENST00000440118 AGTP01019 485 aa19.57■□□□□ 0.72
SHROOM1-204ENST00000440118 VIPP01282 170 aa19.57■□□□□ 0.72
SHROOM1-204ENST00000440118 PYGMP11217 842 aa19.57■□□□□ 0.72
SHROOM1-204ENST00000440118 CD82P27701 267 aa19.57■□□□□ 0.72
SHROOM1-204ENST00000440118 CDC25BP30305 580 aa19.57■□□□□ 0.72
SHROOM1-204ENST00000440118 EPHA4P54764 986 aa19.57■□□□□ 0.72
SHROOM1-204ENST00000440118 ANKRD20A2Q5SQ80 823 aa19.57■□□□□ 0.72
SHROOM1-204ENST00000440118 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.57■□□□□ 0.72
SHROOM1-204ENST00000440118 ANKRD20A1Q5TYW2 823 aa19.57■□□□□ 0.72
SHROOM1-204ENST00000440118 ANKRD20A3Q5VUR7 823 aa19.57■□□□□ 0.72
SHROOM1-204ENST00000440118 AADACL2Q6P093 401 aa19.57■□□□□ 0.72
SHROOM1-204ENST00000440118 ZNF574Q6ZN55 896 aaPredicted RBP19.57■□□□□ 0.72
SHROOM1-204ENST00000440118 LRRC57Q8N9N7 239 aa19.57■□□□□ 0.72
SHROOM1-204ENST00000440118 BRSK1Q8TDC3 778 aa19.57■□□□□ 0.72
SHROOM1-204ENST00000440118 NCSTNQ92542 709 aa19.57■□□□□ 0.72
SHROOM1-204ENST00000440118 APOL2Q9BQE5 337 aa19.57■□□□□ 0.72
SHROOM1-204ENST00000440118 IL26Q9NPH9 171 aa19.57■□□□□ 0.72
SHROOM1-204ENST00000440118 FOXJ2Q9P0K8 574 aa19.57■□□□□ 0.72
SHROOM1-204ENST00000440118 TMEM9Q9P0T7 183 aa19.57■□□□□ 0.72
SHROOM1-204ENST00000440118 KLHL3Q9UH77 587 aa19.57■□□□□ 0.72
SHROOM1-204ENST00000440118 PACSIN2Q9UNF0 486 aaPredicted RBP19.57■□□□□ 0.72
SHROOM1-204ENST00000440118 ADGRG1Q9Y653 693 aa19.57■□□□□ 0.72
SHROOM1-204ENST00000440118 A6NCN8 305 aa19.56■□□□□ 0.72
SHROOM1-204ENST00000440118 C2orf81A6NN90 581 aa19.56■□□□□ 0.72
SHROOM1-204ENST00000440118 A8MU76 341 aa19.56■□□□□ 0.72
SHROOM1-204ENST00000440118 FTCDO95954 541 aa19.56■□□□□ 0.72
SHROOM1-204ENST00000440118 CCL4P13236 92 aa19.56■□□□□ 0.72
SHROOM1-204ENST00000440118 IDSP22304 550 aa19.56■□□□□ 0.72
SHROOM1-204ENST00000440118 CLCNKAP51800 687 aa19.56■□□□□ 0.72
SHROOM1-204ENST00000440118 RHDQ02161 417 aa19.56■□□□□ 0.72
SHROOM1-204ENST00000440118 TMEM115Q12893 351 aaPredicted RBP19.56■□□□□ 0.72
SHROOM1-204ENST00000440118 COL9A2Q14055 689 aaPredicted RBP19.56■□□□□ 0.72
SHROOM1-204ENST00000440118 CHRNA6Q15825 494 aa19.56■□□□□ 0.72
SHROOM1-204ENST00000440118 MANEAQ5SRI9 462 aa19.56■□□□□ 0.72
SHROOM1-204ENST00000440118 LDLRAP1Q5SW96 308 aa19.56■□□□□ 0.72
SHROOM1-204ENST00000440118 ARHGEF18Q6ZSZ5 1173 aa19.56■□□□□ 0.72
SHROOM1-204ENST00000440118 ZFAND4Q86XD8 727 aa19.56■□□□□ 0.72
SHROOM1-204ENST00000440118 TTC13Q8NBP0 860 aa19.56■□□□□ 0.72
SHROOM1-204ENST00000440118 CCDC110Q8TBZ0 833 aa19.56■□□□□ 0.72
SHROOM1-204ENST00000440118 SLC39A7Q92504 469 aa19.56■□□□□ 0.72
SHROOM1-204ENST00000440118 SPATA13Q96N96 652 aa19.56■□□□□ 0.72
SHROOM1-204ENST00000440118 EPB41L1Q9H4G0 881 aa19.56■□□□□ 0.72
SHROOM1-204ENST00000440118 IL17CQ9P0M4 197 aa19.56■□□□□ 0.72
SHROOM1-204ENST00000440118 TRIM10Q9UDY6 481 aa19.56■□□□□ 0.72
SHROOM1-204ENST00000440118 ACSL6Q9UKU0 697 aa19.56■□□□□ 0.72
SHROOM1-204ENST00000440118 MGAQ8IWI9 3026 aa19.56■□□□□ 0.72
SHROOM1-204ENST00000440118 PRAMEF1O95521 474 aa19.55■□□□□ 0.72
SHROOM1-204ENST00000440118 RPL10P27635 214 aaKnown RBP19.55■□□□□ 0.72
SHROOM1-204ENST00000440118 HALP42357 657 aa19.55■□□□□ 0.72
SHROOM1-204ENST00000440118 TGIF1Q15583 401 aa19.55■□□□□ 0.72
SHROOM1-204ENST00000440118 KHDC1Q4VXA5 237 aaKnown RBP19.55■□□□□ 0.72
SHROOM1-204ENST00000440118 SDK2Q58EX2 2172 aa19.55■□□□□ 0.72
SHROOM1-204ENST00000440118 ART4Q93070 314 aa19.55■□□□□ 0.72
SHROOM1-204ENST00000440118 CXorf40BQ96DE9 158 aa19.55■□□□□ 0.72
SHROOM1-204ENST00000440118 TAAR9Q96RI9 348 aa19.55■□□□□ 0.72
SHROOM1-204ENST00000440118 SLC39A1Q9NY26 324 aa19.55■□□□□ 0.72
SHROOM1-204ENST00000440118 SLC23A2Q9UGH3 650 aa19.55■□□□□ 0.72
SHROOM1-204ENST00000440118 ARL5AQ9Y689 179 aa19.55■□□□□ 0.72
SHROOM1-204ENST00000440118 LILRA5A6NI73 299 aa19.54■□□□□ 0.72
SHROOM1-204ENST00000440118 EFCAB7A8K855 629 aa19.54■□□□□ 0.72
SHROOM1-204ENST00000440118 C9orf172C9J069 976 aa19.54■□□□□ 0.72
SHROOM1-204ENST00000440118 STMND1H3BQB6 276 aa19.54■□□□□ 0.72
SHROOM1-204ENST00000440118 ERVH48-1M5A8F1 160 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms