RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 FMO4P31512 558 aa9.91□□□□□ -0.82
CBX5-202ENST00000439541 CCNG1P51959 295 aa9.91□□□□□ -0.82
CBX5-202ENST00000439541 CLNS1AP54105 237 aaKnown RBP9.91□□□□□ -0.82
CBX5-202ENST00000439541 B4GALNT1Q00973 533 aa9.91□□□□□ -0.82
CBX5-202ENST00000439541 IRF9Q00978 393 aa9.91□□□□□ -0.82
CBX5-202ENST00000439541 ZBTB16Q05516 673 aa9.91□□□□□ -0.82
CBX5-202ENST00000439541 DNAJC3Q13217 504 aa9.91□□□□□ -0.82
CBX5-202ENST00000439541 ZNF284Q2VY69 593 aa9.91□□□□□ -0.82
CBX5-202ENST00000439541 GPRC6AQ5T6X5 926 aa9.91□□□□□ -0.82
CBX5-202ENST00000439541 RAET1GQ6H3X3 334 aa9.91□□□□□ -0.82
CBX5-202ENST00000439541 FAM47EQ6ZV65 393 aa9.91□□□□□ -0.82
CBX5-202ENST00000439541 DET1Q7L5Y6 550 aa9.91□□□□□ -0.82
CBX5-202ENST00000439541 SDCCAG8Q86SQ7 713 aaPredicted RBP9.91□□□□□ -0.82
CBX5-202ENST00000439541 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.91□□□□□ -0.82
CBX5-202ENST00000439541 LMNTD2Q8IXW0 634 aa9.91□□□□□ -0.82
CBX5-202ENST00000439541 CLDN19Q8N6F1 224 aa9.91□□□□□ -0.82
CBX5-202ENST00000439541 CFAP61Q8NHU2 1237 aa9.91□□□□□ -0.82
CBX5-202ENST00000439541 LKAAEAR1Q8TD35 194 aa9.91□□□□□ -0.82
CBX5-202ENST00000439541 FUBP1Q96AE4 644 aaKnown RBP9.91□□□□□ -0.82
CBX5-202ENST00000439541 CLDN23Q96B33 292 aa9.91□□□□□ -0.82
CBX5-202ENST00000439541 INTS10Q9NVR2 710 aaKnown RBP9.91□□□□□ -0.82
CBX5-202ENST00000439541 USP36Q9P275 1121 aaKnown RBP9.91□□□□□ -0.82
CBX5-202ENST00000439541 NFKBIL1Q9UBC1 381 aaPredicted RBP9.91□□□□□ -0.82
CBX5-202ENST00000439541 FZD4Q9ULV1 537 aa9.91□□□□□ -0.82
CBX5-202ENST00000439541 STK38LQ9Y2H1 464 aa9.91□□□□□ -0.82
CBX5-202ENST00000439541 SIT1Q9Y3P8 196 aa9.91□□□□□ -0.82
CBX5-202ENST00000439541 A0A0C4DFX4 3053 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 TBC1D3DA0A087WVF3 549 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 TBC1D3IA0A087WXS9 549 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 TBC1D3EA0A087X179 549 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 TBC1D3KA0A087X1G2 549 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 TBC1D3FA6NER0 549 aaPredicted RBP9.9□□□□□ -0.82
CBX5-202ENST00000439541 AGAP14A8MT82 685 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 TBC1D3LB9A6J9 549 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 RAD51BO15315 384 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 TYROBPO43914 113 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 NIPSNAP2O75323 286 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 TM7SF2O76062 418 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 TBC1D3HP0C7X1 549 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 TROVE2P10155 538 aaKnown RBP eCLIP9.9□□□□□ -0.82
CBX5-202ENST00000439541 C7P10643 843 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 TTPAP49638 278 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 SERPINB8P50452 374 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 CLCN5P51795 746 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 TAS2R39P59534 338 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 SIGLEC14Q08ET2 396 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 USP10Q14694 798 aaKnown RBP9.9□□□□□ -0.82
CBX5-202ENST00000439541 IRF4Q15306 451 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 WSCD2Q2TBF2 565 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 TMEM259Q4ZIN3 620 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 SETMARQ53H47 684 aaPredicted RBP9.9□□□□□ -0.82
CBX5-202ENST00000439541 TJAP1Q5JTD0 557 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 AARS2Q5JTZ9 985 aaKnown RBP9.9□□□□□ -0.82
CBX5-202ENST00000439541 HECTD2Q5U5R9 776 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 ZDHHC20Q5W0Z9 365 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 TBC1D3GQ6DHY5 549 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 TBC1D3CQ6IPX1 549 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 SH2D5Q6ZV89 423 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 USP30Q70CQ3 517 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 CYP2U1Q7Z449 544 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 KBTBD6Q86V97 674 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 TBC1D3Q8IZP1 549 aaPredicted RBP9.9□□□□□ -0.82
CBX5-202ENST00000439541 TRAM1L1Q8N609 369 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.9□□□□□ -0.82
CBX5-202ENST00000439541 ERP27Q96DN0 273 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 MTBPQ96DY7 904 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 BIRC8Q96P09 236 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 UHRF1Q96T88 793 aaPredicted RBP9.9□□□□□ -0.82
CBX5-202ENST00000439541 NELL2Q99435 816 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 C19orf43Q9BQ61 176 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 UNKQ9C0B0 810 aaKnown RBP9.9□□□□□ -0.82
CBX5-202ENST00000439541 MYLK2Q9H1R3 596 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 SAR1AQ9NR31 198 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 MBNL1Q9NR56 388 aaKnown RBP9.9□□□□□ -0.82
CBX5-202ENST00000439541 GALPQ9UBC7 116 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 SCML1Q9UN30 329 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 NCKAP1Q9Y2A7 1128 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 MED16Q9Y2X0 877 aa9.9□□□□□ -0.82
CBX5-202ENST00000439541 ATG13O75143 517 aa9.89□□□□□ -0.83
CBX5-202ENST00000439541 PAK4O96013 591 aaPredicted RBP9.89□□□□□ -0.83
CBX5-202ENST00000439541 SLC35E2BP0CK96 405 aa9.89□□□□□ -0.83
CBX5-202ENST00000439541 ITGB6P18564 788 aa9.89□□□□□ -0.83
CBX5-202ENST00000439541 CNTFP26441 200 aa9.89□□□□□ -0.83
CBX5-202ENST00000439541 AKT1P31749 480 aa9.89□□□□□ -0.83
CBX5-202ENST00000439541 RPA3P35244 121 aaPredicted RBP9.89□□□□□ -0.83
CBX5-202ENST00000439541 MAGEA12P43365 314 aa9.89□□□□□ -0.83
CBX5-202ENST00000439541 TIAL1Q01085 375 aaKnown RBP eCLIP9.89□□□□□ -0.83
CBX5-202ENST00000439541 CREB5Q02930 508 aa9.89□□□□□ -0.83
CBX5-202ENST00000439541 ITGA9Q13797 1035 aa9.89□□□□□ -0.83
CBX5-202ENST00000439541 PDE1CQ14123 709 aaPredicted RBP9.89□□□□□ -0.83
CBX5-202ENST00000439541 GPR33Q49SQ1 333 aa9.89□□□□□ -0.83
CBX5-202ENST00000439541 LGSNQ5TDP6 509 aa9.89□□□□□ -0.83
CBX5-202ENST00000439541 CDHR3Q6ZTQ4 885 aa9.89□□□□□ -0.83
CBX5-202ENST00000439541 GALNT7Q86SF2 657 aa9.89□□□□□ -0.83
CBX5-202ENST00000439541 HORMAD1Q86X24 394 aa9.89□□□□□ -0.83
CBX5-202ENST00000439541 NRSN1Q8IZ57 195 aa9.89□□□□□ -0.83
CBX5-202ENST00000439541 SPATA6LQ8N4H0 392 aa9.89□□□□□ -0.83
CBX5-202ENST00000439541 SPEM1Q8N4L4 309 aa9.89□□□□□ -0.83
CBX5-202ENST00000439541 KIF2BQ8N4N8 673 aa9.89□□□□□ -0.83
CBX5-202ENST00000439541 GABPB2Q8TAK5 448 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms