RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 GLT6D1Q7Z4J2 308 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 SPATA19Q7Z5L4 167 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 MIB1Q86YT6 1006 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 CLYBLQ8N0X4 340 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 ZNF655Q8N720 491 aaPredicted RBP6.33□□□□□ -1.4
BDNF-211ENST00000439476 C1orf127Q8N9H9 656 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 SOCS4Q8WXH5 440 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 GATA6Q92908 595 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 EFHD2Q96C19 240 aaPredicted RBP6.33□□□□□ -1.4
BDNF-211ENST00000439476 TEFMQ96QE5 360 aaKnown RBP6.33□□□□□ -1.4
BDNF-211ENST00000439476 YME1L1Q96TA2 773 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 CCDC106Q9BWC9 280 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 DGCR6LQ9BY27 220 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 RACGAP1Q9H0H5 632 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 RHOJQ9H4E5 214 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 COQ10BQ9H8M1 238 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 RNF19AQ9NV58 838 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 CLN6Q9NWW5 311 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 MRPS7Q9Y2R9 242 aaKnown RBP6.33□□□□□ -1.4
BDNF-211ENST00000439476 STON1Q9Y6Q2 735 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 LTBP4Q8N2S1 1624 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.33□□□□□ -1.4
BDNF-211ENST00000439476 SAGE2PA6NJ88 616 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 H3BSA7 217 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 PLK4O00444 970 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 SLC9A3R1O14745 358 aaPredicted RBP6.33□□□□□ -1.4
BDNF-211ENST00000439476 RFPL1O75677 317 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 H6PDO95479 791 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 IRF1P10914 325 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 CYP2B6P20813 491 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 PRKCHP24723 683 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 OR1E1P30953 314 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 RPL9P32969 192 aaKnown RBP6.33□□□□□ -1.4
BDNF-211ENST00000439476 THPOP40225 353 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 COPZ1P61923 177 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 TRIM25Q14258 630 aaKnown RBP6.33□□□□□ -1.4
BDNF-211ENST00000439476 ANGPT1Q15389 498 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 TCEA2Q15560 299 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 CA9Q16790 459 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 ANXA8L1Q5VT79 327 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 GALNT18Q6P9A2 607 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 ZNF704Q6ZNC4 412 aaPredicted RBP6.33□□□□□ -1.4
BDNF-211ENST00000439476 ARHGAP36Q6ZRI8 547 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 USP45Q70EL2 814 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 ADGRG6Q86SQ4 1221 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.33□□□□□ -1.4
BDNF-211ENST00000439476 ANKRD52Q8NB46 1076 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 DNAJB14Q8TBM8 379 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 AZIN2Q96A70 460 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 AKT1S1Q96B36 256 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 ITPKCQ96DU7 683 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 MFSD3Q96ES6 412 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 MCRS1Q96EZ8 462 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 TMEM106CQ9BVX2 250 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 FAIM2Q9BWQ8 316 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 STRA6Q9BX79 667 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 ZNF717Q9BY31 904 aaPredicted RBP6.33□□□□□ -1.4
BDNF-211ENST00000439476 HDHD2Q9H0R4 259 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 TRIM39Q9HCM9 518 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 EIF2B4Q9UI10 523 aaKnown RBP6.33□□□□□ -1.4
BDNF-211ENST00000439476 RPH3AQ9Y2J0 694 aaPredicted RBP6.33□□□□□ -1.4
BDNF-211ENST00000439476 MFSD11O43934 449 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 AMHP03971 560 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 FGF1P05230 155 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 NTSP30990 170 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 BCAP31P51572 246 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 MLLT6P55198 1093 aaPredicted RBP6.33□□□□□ -1.4
BDNF-211ENST00000439476 RPL26P61254 145 aaKnown RBP6.33□□□□□ -1.4
BDNF-211ENST00000439476 BCL2L1Q07817 233 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 DLG2Q15700 870 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 BICRALQ6AI39 1079 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 CEP68Q76N32 757 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 PIGZQ86VD9 579 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 ZNF565Q8N9K5 539 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 LPCAT1Q8NF37 534 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 INTS12Q96CB8 462 aaKnown RBP6.33□□□□□ -1.4
BDNF-211ENST00000439476 SLC38A2Q96QD8 506 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 OR52B2Q96RD2 323 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 CITED4Q96RK1 184 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 HAPLN3Q96S86 360 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 RHOBTB2Q9BYZ6 727 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 ALG9Q9H6U8 611 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 ZNF624Q9P2J8 865 aaPredicted RBP6.33□□□□□ -1.4
BDNF-211ENST00000439476 NR2E3Q9Y5X4 410 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 TJP1Q07157 1748 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 BTN3A1O00481 513 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 PRMT5O14744 637 aaPredicted RBP6.33□□□□□ -1.4
BDNF-211ENST00000439476 CHRNGP07510 517 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 EPB42P16452 691 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 NR4A1P22736 598 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 AKAP5P24588 427 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 MATKP42679 507 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 PCP4P48539 62 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 SEMA5AQ13591 1074 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 GRM3Q14832 879 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 KCNJ8Q15842 424 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 SPATS1Q496A3 300 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 PPM1LQ5SGD2 360 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 PERM1Q5SV97 790 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 TMEM198Q66K66 360 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms