RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 RENBPP51606 427 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 NEK2P51955 445 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 CASP9P55211 416 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 RPS24P62847 133 aaKnown RBP9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 LIPEQ05469 1076 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 PRKCZQ05513 592 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 TNK2Q07912 1038 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 TUSC3Q13454 348 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 PYCR3Q53H96 274 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 HECTD2Q5U5R9 776 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 RAB44Q7Z6P3 723 aaPredicted RBP9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 DEFB128Q7Z7B8 93 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 PLD3Q8IV08 490 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 MFSD6LQ8IWD5 586 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 KCTD13Q8WZ19 329 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 ZNF419Q96HQ0 510 aaPredicted RBP9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 NECTIN4Q96NY8 510 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 TM6SF2Q9BZW4 377 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 CCSER2Q9H7U1 834 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 GKN1Q9NS71 199 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 OSER1Q9NX31 292 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 SMPD3Q9NY59 655 aaPredicted RBP9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 VWA7Q9Y334 891 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 PTCH2Q9Y6C5 1203 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 ARID1BQ8NFD5 2236 aaPredicted RBP9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 WDR81Q562E7 1941 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 A0A0D9SEW6 157 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 MATN3O15232 486 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 MAFKO60675 156 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 CLK1P49759 484 aaKnown RBP9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 TSTA3Q13630 321 aaPredicted RBP9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 PDCD4Q53EL6 469 aaKnown RBP9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 ZNF598Q86UK7 904 aaKnown RBP9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 CADM3Q8N126 398 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 CDYL2Q8N8U2 506 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 NDNFQ8TB73 568 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 APBB2Q92870 758 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 ZNF597Q96LX8 424 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 SLC25A23Q9BV35 468 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 APOL5Q9BWW9 433 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 EIF2B3Q9NR50 452 aaKnown RBP9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 ATAD3AQ9NVI7 634 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.86□□□□□ -0.838e-7■■□□□ 12.8
CDC42SE1-202ENST00000439374 SUN2Q9UH99 717 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 GTF2IRD1Q9UHL9 959 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 A0A1B0GTL3 188 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 A8MT66 165 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 E5RI56 91 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 AXIN1O15169 862 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 GLP2RO95838 553 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 SBK3P0C264 359 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 KCNC1P48547 511 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 INSCQ1MX18 579 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 UAP1L1Q3KQV9 507 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 PRSS55Q6UWB4 352 aaPredicted RBP9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 C11orf74Q86VG3 221 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 DENND1CQ8IV53 801 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 ABHD11Q8NFV4 315 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 TFAP2CQ92754 450 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 IGSF8Q969P0 613 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 MAGED4Q96JG8 741 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 VAT1Q99536 393 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 RTP3Q9BQQ7 232 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 ZFP14Q9HCL3 533 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 ENTPD7Q9NQZ7 604 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 HACD3Q9P035 362 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 IQCF5A8MTL0 148 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 RGS5O15539 181 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 TOMM70O94826 608 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 CTPS1P17812 591 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 ATP5F1P24539 256 aaPredicted RBP9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 HPCAL1P37235 193 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 KCNK10P57789 538 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 NUMA1Q14980 2115 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 FBXL22Q6P050 247 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 SCD5Q86SK9 330 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 KLHDC9Q8NEP7 349 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 TRPV1Q8NER1 839 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 OR7A2PQ8NGA2 310 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 TRIB2Q92519 343 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 NTAN1Q96AB6 310 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 C19orf60Q96EN9 201 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 AURKBQ96GD4 344 aaPredicted RBP9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 MRGPRX2Q96LB1 330 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 GPR22Q99680 433 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 ACBD6Q9BR61 282 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 RNF38Q9H0F5 515 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 RLFQ13129 1914 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 UPK3BL1B0FP48 263 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 UPK3BL2E5RIL1 263 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 ZNF682O95780 498 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 LTA4HP09960 611 aaKnown RBP9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 ALDOCP09972 364 aaKnown RBP9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 IFI30P13284 250 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 GSK3BP49841 420 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 KPNA2P52292 529 aaKnown RBP9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 UFM1P61960 85 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 PFKPQ01813 784 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 PIK3R6Q5UE93 754 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 SMYD5Q6GMV2 418 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms