RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 IZUMO3Q5VZ72 239 aa10.99□□□□□ -0.65
CSTF3-203ENST00000438862 DENND2CQ68D51 928 aa10.99□□□□□ -0.65
CSTF3-203ENST00000438862 PWWP2BQ6NUJ5 590 aa10.99□□□□□ -0.65
CSTF3-203ENST00000438862 ADAMTSL4Q6UY14 1074 aa10.99□□□□□ -0.65
CSTF3-203ENST00000438862 Q6ZVL8 140 aa10.99□□□□□ -0.65
CSTF3-203ENST00000438862 MARK2Q7KZI7 788 aaKnown RBP10.99□□□□□ -0.65
CSTF3-203ENST00000438862 PRSS42Q7Z5A4 293 aa10.99□□□□□ -0.65
CSTF3-203ENST00000438862 NLRP8Q86W28 1048 aa10.99□□□□□ -0.65
CSTF3-203ENST00000438862 TSEN2Q8NCE0 465 aaKnown RBP10.99□□□□□ -0.65
CSTF3-203ENST00000438862 MSANTD4Q8NCY6 345 aa10.99□□□□□ -0.65
CSTF3-203ENST00000438862 ITPKCQ96DU7 683 aa10.99□□□□□ -0.65
CSTF3-203ENST00000438862 PCMTD1Q96MG8 357 aaPredicted RBP10.99□□□□□ -0.65
CSTF3-203ENST00000438862 NAA15Q9BXJ9 866 aaKnown RBP10.99□□□□□ -0.65
CSTF3-203ENST00000438862 STK33Q9BYT3 514 aa10.99□□□□□ -0.65
CSTF3-203ENST00000438862 MAGEB5Q9BZ81 275 aa10.99□□□□□ -0.65
CSTF3-203ENST00000438862 PDCL3Q9H2J4 239 aa10.99□□□□□ -0.65
CSTF3-203ENST00000438862 SIX2Q9NPC8 291 aa10.99□□□□□ -0.65
CSTF3-203ENST00000438862 OGFRQ9NZT2 677 aa10.99□□□□□ -0.65
CSTF3-203ENST00000438862 CAPN11Q9UMQ6 739 aa10.99□□□□□ -0.65
CSTF3-203ENST00000438862 LOC100996750A0A140TA64 210 aa10.98□□□□□ -0.65
CSTF3-203ENST00000438862 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.98□□□□□ -0.65
CSTF3-203ENST00000438862 GOLGA8SH3BPF8 625 aa10.98□□□□□ -0.65
CSTF3-203ENST00000438862 J3KR12 359 aa10.98□□□□□ -0.65
CSTF3-203ENST00000438862 PRAMEF11O60813 436 aa10.98□□□□□ -0.65
CSTF3-203ENST00000438862 PALMO75781 387 aa10.98□□□□□ -0.65
CSTF3-203ENST00000438862 TIAF1O95411 115 aa10.98□□□□□ -0.65
CSTF3-203ENST00000438862 ALPPP05187 535 aa10.98□□□□□ -0.65
CSTF3-203ENST00000438862 EDN3P14138 238 aa10.98□□□□□ -0.65
CSTF3-203ENST00000438862 COX6B1P14854 86 aa10.98□□□□□ -0.65
CSTF3-203ENST00000438862 NELFEP18615 380 aaKnown RBP10.98□□□□□ -0.65
CSTF3-203ENST00000438862 RGRP47804 291 aa10.98□□□□□ -0.65
CSTF3-203ENST00000438862 BPIFB4P59827 614 aa10.98□□□□□ -0.65
CSTF3-203ENST00000438862 TBX2Q13207 712 aaPredicted RBP10.98□□□□□ -0.65
CSTF3-203ENST00000438862 CDO1Q16878 200 aa10.98□□□□□ -0.65
CSTF3-203ENST00000438862 CACHD1Q5VU97 1274 aa10.98□□□□□ -0.65
CSTF3-203ENST00000438862 GJB7Q6PEY0 223 aa10.98□□□□□ -0.65
CSTF3-203ENST00000438862 ZNF517Q6ZMY9 492 aaPredicted RBP10.98□□□□□ -0.65
CSTF3-203ENST00000438862 CHST15Q7LFX5 561 aaPredicted RBP10.98□□□□□ -0.65
CSTF3-203ENST00000438862 STRADAQ7RTN6 431 aa10.98□□□□□ -0.65
CSTF3-203ENST00000438862 HSD11B1LQ7Z5J1 315 aa10.98□□□□□ -0.65
CSTF3-203ENST00000438862 KCNMB4Q86W47 210 aa10.98□□□□□ -0.65
CSTF3-203ENST00000438862 TM9SF4Q92544 642 aa10.98□□□□□ -0.65
CSTF3-203ENST00000438862 SYN2Q92777 582 aaPredicted RBP10.98□□□□□ -0.65
CSTF3-203ENST00000438862 NTAN1Q96AB6 310 aa10.98□□□□□ -0.65
CSTF3-203ENST00000438862 ZDHHC12Q96GR4 267 aa10.98□□□□□ -0.65
CSTF3-203ENST00000438862 SGSM3Q96HU1 749 aa10.98□□□□□ -0.65
CSTF3-203ENST00000438862 KRTAP4-6Q9BYQ5 205 aa10.98□□□□□ -0.65
CSTF3-203ENST00000438862 GANQ9H2C0 597 aa10.98□□□□□ -0.65
CSTF3-203ENST00000438862 CATSPERBQ9H7T0 1116 aa10.98□□□□□ -0.65
CSTF3-203ENST00000438862 SNX7Q9UNH6 387 aa10.98□□□□□ -0.65
CSTF3-203ENST00000438862 DCHS2Q6V1P9 2916 aa10.98□□□□□ -0.65
CSTF3-203ENST00000438862 GOLGA6L6A8MZA4 724 aa10.97□□□□□ -0.65
CSTF3-203ENST00000438862 F5H423 210 aaPredicted RBP10.97□□□□□ -0.65
CSTF3-203ENST00000438862 IPO13O94829 963 aaKnown RBP10.97□□□□□ -0.65
CSTF3-203ENST00000438862 ASMTLO95671 621 aa10.97□□□□□ -0.65
CSTF3-203ENST00000438862 KLK3P07288 261 aaPredicted RBP10.97□□□□□ -0.65
CSTF3-203ENST00000438862 STSP08842 583 aa10.97□□□□□ -0.65
CSTF3-203ENST00000438862 RAB40ALP0C0E4 278 aa10.97□□□□□ -0.65
CSTF3-203ENST00000438862 CCDC172P0C7W6 258 aa10.97□□□□□ -0.65
CSTF3-203ENST00000438862 HOXB4P17483 251 aaPredicted RBP10.97□□□□□ -0.65
CSTF3-203ENST00000438862 TYRP1P17643 537 aa10.97□□□□□ -0.65
CSTF3-203ENST00000438862 XRCC1P18887 633 aaPredicted RBP10.97□□□□□ -0.65
CSTF3-203ENST00000438862 SDC4P31431 198 aa10.97□□□□□ -0.65
CSTF3-203ENST00000438862 SCNN1BP51168 640 aa10.97□□□□□ -0.65
CSTF3-203ENST00000438862 AP1S1P61966 158 aa10.97□□□□□ -0.65
CSTF3-203ENST00000438862 ZBED6P86452 979 aa10.97□□□□□ -0.65
CSTF3-203ENST00000438862 ACY1Q03154 408 aa10.97□□□□□ -0.65
CSTF3-203ENST00000438862 TUBB3Q13509 450 aa10.97□□□□□ -0.65
CSTF3-203ENST00000438862 RAB6CQ53S08 254 aa10.97□□□□□ -0.65
CSTF3-203ENST00000438862 Q6ZS92 163 aa10.97□□□□□ -0.65
CSTF3-203ENST00000438862 TMEM26Q6ZUK4 368 aa10.97□□□□□ -0.65
CSTF3-203ENST00000438862 TECPR1Q7Z6L1 1165 aa10.97□□□□□ -0.65
CSTF3-203ENST00000438862 CNGA4Q8IV77 575 aa10.97□□□□□ -0.65
CSTF3-203ENST00000438862 ZADH2Q8N4Q0 377 aa10.97□□□□□ -0.65
CSTF3-203ENST00000438862 SIDT2Q8NBJ9 832 aaKnown RBP10.97□□□□□ -0.65
CSTF3-203ENST00000438862 EXD1Q8NHP7 514 aa10.97□□□□□ -0.65
CSTF3-203ENST00000438862 MR1Q95460 341 aa10.97□□□□□ -0.65
CSTF3-203ENST00000438862 PDLIM2Q96JY6 352 aa10.97□□□□□ -0.65
CSTF3-203ENST00000438862 RAB33BQ9H082 229 aa10.97□□□□□ -0.65
CSTF3-203ENST00000438862 RAB6CQ9H0N0 254 aa10.97□□□□□ -0.65
CSTF3-203ENST00000438862 RMI1Q9H9A7 625 aa10.97□□□□□ -0.65
CSTF3-203ENST00000438862 WASH6PQ9NQA3 447 aa10.97□□□□□ -0.65
CSTF3-203ENST00000438862 FAM207AQ9NSI2 230 aaPredicted RBP10.97□□□□□ -0.65
CSTF3-203ENST00000438862 VPS18Q9P253 973 aa10.97□□□□□ -0.65
CSTF3-203ENST00000438862 EPHA6Q9UF33 1036 aa10.97□□□□□ -0.65
CSTF3-203ENST00000438862 DNAJC12Q9UKB3 198 aa10.97□□□□□ -0.65
CSTF3-203ENST00000438862 NTNG1Q9Y2I2 539 aa10.97□□□□□ -0.65
CSTF3-203ENST00000438862 LUC7L2Q9Y383 392 aaKnown RBP10.97□□□□□ -0.65
CSTF3-203ENST00000438862 FER1L5A0AVI2 2057 aa10.97□□□□□ -0.65
CSTF3-203ENST00000438862 MDC1Q14676 2089 aaKnown RBP10.96□□□□□ -0.65
CSTF3-203ENST00000438862 HTRA2O43464 458 aaPredicted RBP10.96□□□□□ -0.65
CSTF3-203ENST00000438862 KIF1CO43896 1103 aaKnown RBP10.96□□□□□ -0.65
CSTF3-203ENST00000438862 SNX2O60749 519 aa10.96□□□□□ -0.65
CSTF3-203ENST00000438862 DNAJC6O75061 913 aa10.96□□□□□ -0.65
CSTF3-203ENST00000438862 CPNE3O75131 537 aaKnown RBP10.96□□□□□ -0.65
CSTF3-203ENST00000438862 SOCS5O75159 536 aa10.96□□□□□ -0.65
CSTF3-203ENST00000438862 SOD1P00441 154 aa10.96□□□□□ -0.65
CSTF3-203ENST00000438862 SSTR2P30874 369 aa10.96□□□□□ -0.65
CSTF3-203ENST00000438862 HNRNPH3P31942 346 aaKnown RBP10.96□□□□□ -0.65
CSTF3-203ENST00000438862 PTPN9P43378 593 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms