RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 HHEXQ03014 270 aa24.38■■□□□ 1.49
RAPGEF1-206ENST00000438647 PLA2G4EQ3MJ16 856 aa24.38■■□□□ 1.49
RAPGEF1-206ENST00000438647 AMZ1Q400G9 498 aa24.38■■□□□ 1.49
RAPGEF1-206ENST00000438647 PIM3Q86V86 326 aa24.38■■□□□ 1.49
RAPGEF1-206ENST00000438647 TAB3Q8N5C8 712 aaPredicted RBP24.38■■□□□ 1.49
RAPGEF1-206ENST00000438647 SLC38A3Q99624 504 aa24.38■■□□□ 1.49
RAPGEF1-206ENST00000438647 FOXP3Q9BZS1 431 aa24.38■■□□□ 1.49
RAPGEF1-206ENST00000438647 ASB8Q9H765 288 aa24.38■■□□□ 1.49
RAPGEF1-206ENST00000438647 EPB41L5Q9HCM4 733 aa24.38■■□□□ 1.49
RAPGEF1-206ENST00000438647 SARS2Q9NP81 518 aaKnown RBP24.38■■□□□ 1.49
RAPGEF1-206ENST00000438647 HOMER3Q9NSC5 361 aa24.38■■□□□ 1.49
RAPGEF1-206ENST00000438647 PAK5Q9P286 719 aa24.38■■□□□ 1.49
RAPGEF1-206ENST00000438647 FKBPLQ9UIM3 349 aa24.38■■□□□ 1.49
RAPGEF1-206ENST00000438647 ATXN7L1Q9ULK2 861 aaPredicted RBP24.38■■□□□ 1.49
RAPGEF1-206ENST00000438647 JRKLQ9Y4A0 524 aa24.38■■□□□ 1.49
RAPGEF1-206ENST00000438647 CELSR3Q9NYQ7 3312 aa24.38■■□□□ 1.49
RAPGEF1-206ENST00000438647 URB1O60287 2271 aaKnown RBP24.37■■□□□ 1.49
RAPGEF1-206ENST00000438647 TRBV23OR9-2A0A075B6M9 112 aa24.37■■□□□ 1.49
RAPGEF1-206ENST00000438647 E7EVH7 732 aa24.37■■□□□ 1.49
RAPGEF1-206ENST00000438647 GPR39O43194 453 aa24.37■■□□□ 1.49
RAPGEF1-206ENST00000438647 CEP104O60308 925 aa24.37■■□□□ 1.49
RAPGEF1-206ENST00000438647 EML2O95834 649 aa24.37■■□□□ 1.49
RAPGEF1-206ENST00000438647 GAS8O95995 478 aa24.37■■□□□ 1.49
RAPGEF1-206ENST00000438647 RBMS1P29558 406 aaKnown RBP24.37■■□□□ 1.49
RAPGEF1-206ENST00000438647 AKT1P31749 480 aa24.37■■□□□ 1.49
RAPGEF1-206ENST00000438647 MLLT3P42568 568 aaPredicted RBP24.37■■□□□ 1.49
RAPGEF1-206ENST00000438647 LMAN1P49257 510 aa24.37■■□□□ 1.49
RAPGEF1-206ENST00000438647 ERVPABLB-1P60509 514 aa24.37■■□□□ 1.49
RAPGEF1-206ENST00000438647 NFATC2Q13469 925 aa24.37■■□□□ 1.49
RAPGEF1-206ENST00000438647 SIX1Q15475 284 aaPredicted RBP24.37■■□□□ 1.49
RAPGEF1-206ENST00000438647 LONRF2Q1L5Z9 754 aa24.37■■□□□ 1.49
RAPGEF1-206ENST00000438647 B3GNT8Q7Z7M8 397 aa24.37■■□□□ 1.49
RAPGEF1-206ENST00000438647 ZNF547Q8IVP9 402 aa24.37■■□□□ 1.49
RAPGEF1-206ENST00000438647 OR13C4Q8NGS5 318 aa24.37■■□□□ 1.49
RAPGEF1-206ENST00000438647 SNIP1Q8TAD8 396 aaKnown RBP24.37■■□□□ 1.49
RAPGEF1-206ENST00000438647 ZNF514Q96K75 400 aaPredicted RBP24.37■■□□□ 1.49
RAPGEF1-206ENST00000438647 THSD1Q9NS62 852 aa24.37■■□□□ 1.49
RAPGEF1-206ENST00000438647 KCNK4Q9NYG8 393 aa24.37■■□□□ 1.49
RAPGEF1-206ENST00000438647 DRG1Q9Y295 367 aaKnown RBP24.37■■□□□ 1.49
RAPGEF1-206ENST00000438647 KCTD3Q9Y597 815 aa24.37■■□□□ 1.49
RAPGEF1-206ENST00000438647 LDB2O43679 373 aa24.36■■□□□ 1.49
RAPGEF1-206ENST00000438647 MSH3P20585 1137 aa24.36■■□□□ 1.49
RAPGEF1-206ENST00000438647 ITGALP20701 1170 aa24.36■■□□□ 1.49
RAPGEF1-206ENST00000438647 CHCHD2P9Q5T1J5 151 aaPredicted RBP24.36■■□□□ 1.49
RAPGEF1-206ENST00000438647 DNAAF3Q8N9W5 541 aa24.36■■□□□ 1.49
RAPGEF1-206ENST00000438647 TMEM159Q96B96 161 aa24.36■■□□□ 1.49
RAPGEF1-206ENST00000438647 ULK4Q96C45 1275 aa24.36■■□□□ 1.49
RAPGEF1-206ENST00000438647 DPYSL5Q9BPU6 564 aa24.36■■□□□ 1.49
RAPGEF1-206ENST00000438647 LDHAL6BQ9BYZ2 381 aaPredicted RBP24.36■■□□□ 1.49
RAPGEF1-206ENST00000438647 ETNK1Q9HBU6 452 aa24.36■■□□□ 1.49
RAPGEF1-206ENST00000438647 PRDM8Q9NQV8 689 aa24.36■■□□□ 1.49
RAPGEF1-206ENST00000438647 SLC23A2Q9UGH3 650 aa24.36■■□□□ 1.49
RAPGEF1-206ENST00000438647 CRLS1Q9UJA2 301 aa24.36■■□□□ 1.49
RAPGEF1-206ENST00000438647 DNAJC16Q9Y2G8 782 aa24.36■■□□□ 1.49
RAPGEF1-206ENST00000438647 DNMT3AQ9Y6K1 912 aaPredicted RBP24.36■■□□□ 1.49
RAPGEF1-206ENST00000438647 BPTFQ12830 3046 aa24.36■■□□□ 1.49
RAPGEF1-206ENST00000438647 PDZK1P1A8MUH7 402 aa24.35■■□□□ 1.49
RAPGEF1-206ENST00000438647 RRP8O43159 456 aaKnown RBP24.35■■□□□ 1.49
RAPGEF1-206ENST00000438647 KRT37O76014 449 aa24.35■■□□□ 1.49
RAPGEF1-206ENST00000438647 RALBP11234 206 aa24.35■■□□□ 1.49
RAPGEF1-206ENST00000438647 IDSP22304 550 aa24.35■■□□□ 1.49
RAPGEF1-206ENST00000438647 MSNP26038 577 aaKnown RBP24.35■■□□□ 1.49
RAPGEF1-206ENST00000438647 CXCR5P32302 372 aa24.35■■□□□ 1.49
RAPGEF1-206ENST00000438647 TMPRSS15P98073 1019 aa24.35■■□□□ 1.49
RAPGEF1-206ENST00000438647 XIAPP98170 497 aa24.35■■□□□ 1.49
RAPGEF1-206ENST00000438647 ZFP36L1Q07352 338 aaKnown RBP24.35■■□□□ 1.49
RAPGEF1-206ENST00000438647 CDH17Q12864 832 aa24.35■■□□□ 1.49
RAPGEF1-206ENST00000438647 SEMA5AQ13591 1074 aa24.35■■□□□ 1.49
RAPGEF1-206ENST00000438647 SEPT6Q14141 434 aa24.35■■□□□ 1.49
RAPGEF1-206ENST00000438647 POU6F1Q14863 301 aa24.35■■□□□ 1.49
RAPGEF1-206ENST00000438647 C4orf22Q6V702 233 aa24.35■■□□□ 1.49
RAPGEF1-206ENST00000438647 RAB11FIP2Q7L804 512 aa24.35■■□□□ 1.49
RAPGEF1-206ENST00000438647 SNX20Q7Z614 316 aa24.35■■□□□ 1.49
RAPGEF1-206ENST00000438647 AMZ2Q86W34 360 aa24.35■■□□□ 1.49
RAPGEF1-206ENST00000438647 RASGEF1AQ8N9B8 481 aa24.35■■□□□ 1.49
RAPGEF1-206ENST00000438647 AHCYL2Q96HN2 611 aaKnown RBP24.35■■□□□ 1.49
RAPGEF1-206ENST00000438647 RDH14Q9HBH5 336 aa24.35■■□□□ 1.49
RAPGEF1-206ENST00000438647 RAB6BQ9NRW1 208 aa24.35■■□□□ 1.49
RAPGEF1-206ENST00000438647 SLC30A1Q9Y6M5 507 aa24.35■■□□□ 1.49
RAPGEF1-206ENST00000438647 ZNF106Q9H2Y7 1883 aaKnown RBP24.34■■□□□ 1.49
RAPGEF1-206ENST00000438647 A0A087WV48 116 aa24.34■■□□□ 1.49
RAPGEF1-206ENST00000438647 IGHV1OR21-1A0A087WYE8 117 aa24.34■■□□□ 1.49
RAPGEF1-206ENST00000438647 PLD2O14939 933 aa24.34■■□□□ 1.49
RAPGEF1-206ENST00000438647 TLX3O43711 291 aaPredicted RBP24.34■■□□□ 1.49
RAPGEF1-206ENST00000438647 SUN1O94901 812 aa24.34■■□□□ 1.49
RAPGEF1-206ENST00000438647 TPH1P17752 444 aa24.34■■□□□ 1.49
RAPGEF1-206ENST00000438647 CD1CP29017 333 aa24.34■■□□□ 1.49
RAPGEF1-206ENST00000438647 SQSTM1Q13501 440 aa24.34■■□□□ 1.49
RAPGEF1-206ENST00000438647 LAMB3Q13751 1172 aa24.34■■□□□ 1.49
RAPGEF1-206ENST00000438647 FOXR1Q6PIV2 292 aa24.34■■□□□ 1.49
RAPGEF1-206ENST00000438647 TMEM220Q6QAJ8 160 aa24.34■■□□□ 1.49
RAPGEF1-206ENST00000438647 WASH2PQ6VEQ5 465 aa24.34■■□□□ 1.49
RAPGEF1-206ENST00000438647 PPP1R21Q6ZMI0 780 aa24.34■■□□□ 1.49
RAPGEF1-206ENST00000438647 LRRC69Q6ZNQ3 347 aa24.34■■□□□ 1.49
RAPGEF1-206ENST00000438647 GSTA5Q7RTV2 222 aa24.34■■□□□ 1.49
RAPGEF1-206ENST00000438647 C11orf96Q7Z7L8 435 aa24.34■■□□□ 1.49
RAPGEF1-206ENST00000438647 SLITRK4Q8IW52 837 aa24.34■■□□□ 1.49
RAPGEF1-206ENST00000438647 FBXO39Q8N4B4 442 aa24.34■■□□□ 1.49
RAPGEF1-206ENST00000438647 OR10G6Q8NH81 332 aa24.34■■□□□ 1.49
RAPGEF1-206ENST00000438647 STYXQ8WUJ0 223 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms