RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 CDH16O75309 829 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 RECQL5O94762 991 aaPredicted RBP6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 HAUS5O94927 633 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 PRAMEF1O95521 474 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 PDGFBP01127 241 aaPredicted RBP6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 DCNP07585 359 aaKnown RBP6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 INHBAP08476 426 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 GSTP1P09211 210 aaKnown RBP6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 ELFN1P0C7U0 828 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 MYZAPP0CAP1 466 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 C6P13671 934 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 UGT1A6P19224 532 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 UGT1A1P22309 533 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 UGT1A4P22310 534 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 UGT1A3P35503 534 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 UGT1A5P35504 534 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 SPAM1P38567 509 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 GP5P40197 560 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 ABCG1P45844 678 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 RPS9P46781 194 aaKnown RBP6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 LEPRP48357 1165 aaKnown RBP6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 TPMTP51580 245 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 ADPRHP54922 357 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 DCDC1P59894 354 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 CLCQ05315 142 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 CACNG1Q06432 222 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 SIGLEC14Q08ET2 396 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 CCDC15Q0P6D6 951 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 MTAPQ13126 283 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 BMPR2Q13873 1038 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 FGL2Q14314 439 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 ACOX1Q15067 660 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 FXNQ16595 210 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 TYSND1Q2T9J0 566 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 FASTKD1Q53R41 847 aaKnown RBP6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 TTMPQ5BVD1 217 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 GRTP1Q5TC63 336 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 ZDHHC20Q5W0Z9 365 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 SEL1L3Q68CR1 1132 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 CWF19L1Q69YN2 538 aaKnown RBP6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 MRNIPQ6NTE8 343 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 PSAPL1Q6NUJ1 521 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 KIAA1324Q6UXG2 1013 aaKnown RBP6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 ADAMTSL4Q6UY14 1074 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 KIAA0408Q6ZU52 694 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 USP30Q70CQ3 517 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 CROCCP2Q86T23 111 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 ZC3HC1Q86WB0 502 aaKnown RBP6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 LSRQ86X29 649 aaPredicted RBP6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 LMNTD2Q8IXW0 634 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 RAVER1Q8IY67 606 aaKnown RBP6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 RIBC1Q8N443 379 aaPredicted RBP6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 SPEM1Q8N4L4 309 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 ACVR1CQ8NER5 493 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 ZNF398Q8TD17 642 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 CALML6Q8TD86 181 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 DTX3LQ8TDB6 740 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 HMGB4Q8WW32 186 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 EDAQ92838 391 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 SCAMP4Q969E2 229 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 TLCD1Q96CP7 247 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 DTD2Q96FN9 168 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 PLEKHG4BQ96PX9 1271 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 RUFY1Q96T51 708 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 RBBP8Q99708 897 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 CPNE1Q99829 537 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 RIOK2Q9BVS4 552 aaKnown RBP6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 ABCG8Q9H221 673 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 CENPHQ9H3R5 247 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 FAM83DQ9H4H8 585 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 FBXO6Q9NRD1 293 aaPredicted RBP6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 CATSPERZQ9NTU4 200 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 PKD2L2Q9NZM6 624 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 DLGAP2Q9P1A6 1054 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 USP36Q9P275 1121 aaKnown RBP6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 PSMC3IPQ9P2W1 217 aaPredicted RBP6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 NFKBIL1Q9UBC1 381 aaPredicted RBP6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 TBK1Q9UHD2 729 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 APPL1Q9UKG1 709 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 FZD4Q9ULV1 537 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 ZFR2Q9UPR6 939 aaKnown RBP6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 COQ6Q9Y2Z9 468 aa6.98□□□□□ -1.29
LSM3P3-201ENST00000436601 ELOA3CA0A087WX78 387 aaPredicted RBP6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 TRBV5-4A0A0C4DH59 114 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 FAM221BA6H8Z2 402 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 ELOA3DA6NLF2 546 aaPredicted RBP6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 FADS2P1A8MWK0 482 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 C10orf142B7Z368 130 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 RGS16O15492 202 aaPredicted RBP6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 PCDH8O95206 1070 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 SOD1P00441 154 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 IGLV3-19P01714 112 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 ITGA2BP08514 1039 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 ACADMP11310 421 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 OGNP20774 298 aaKnown RBP6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 ACSL1P33121 698 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 CD151P48509 253 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 SERPINB9P50453 376 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 LIMK2P53671 638 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms