RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 DOLKQ9UPQ8 538 aa16.34■□□□□ 0.21
CTDSPL-204ENST00000435525 PCDHB1Q9Y5F3 818 aa16.34■□□□□ 0.21
CTDSPL-204ENST00000435525 DNMT3AQ9Y6K1 912 aaPredicted RBP16.34■□□□□ 0.21
CTDSPL-204ENST00000435525 OAS3Q9Y6K5 1087 aaKnown RBP16.34■□□□□ 0.21
CTDSPL-204ENST00000435525 EML5Q05BV3 1969 aa16.34■□□□□ 0.21
CTDSPL-204ENST00000435525 IGLV3-16A0A075B6K0 115 aa16.33■□□□□ 0.2
CTDSPL-204ENST00000435525 UBA6A0AVT1 1052 aaPredicted RBP16.33■□□□□ 0.2
CTDSPL-204ENST00000435525 GOLGA8KD6RF30 607 aa16.33■□□□□ 0.2
CTDSPL-204ENST00000435525 GOLGA8TH3BQL2 631 aa16.33■□□□□ 0.2
CTDSPL-204ENST00000435525 GPR39O43194 453 aa16.33■□□□□ 0.2
CTDSPL-204ENST00000435525 MTX2O75431 263 aa16.33■□□□□ 0.2
CTDSPL-204ENST00000435525 ERLIN1O75477 346 aa16.33■□□□□ 0.2
CTDSPL-204ENST00000435525 FTH1P02794 183 aa16.33■□□□□ 0.2
CTDSPL-204ENST00000435525 ZNF8P17098 575 aaPredicted RBP16.33■□□□□ 0.2
CTDSPL-204ENST00000435525 ARNTP27540 789 aa16.33■□□□□ 0.2
CTDSPL-204ENST00000435525 SSTR1P30872 391 aa16.33■□□□□ 0.2
CTDSPL-204ENST00000435525 CDKN1CP49918 316 aaPredicted RBP16.33■□□□□ 0.2
CTDSPL-204ENST00000435525 PMS2P54278 862 aa16.33■□□□□ 0.2
CTDSPL-204ENST00000435525 EIF2B5Q13144 721 aaKnown RBP16.33■□□□□ 0.2
CTDSPL-204ENST00000435525 KYNUQ16719 465 aa16.33■□□□□ 0.2
CTDSPL-204ENST00000435525 TYSND1Q2T9J0 566 aa16.33■□□□□ 0.2
CTDSPL-204ENST00000435525 PTRHD1Q6GMV3 140 aaKnown RBP16.33■□□□□ 0.2
CTDSPL-204ENST00000435525 EMBQ6PCB8 327 aa16.33■□□□□ 0.2
CTDSPL-204ENST00000435525 TMEM220Q6QAJ8 160 aa16.33■□□□□ 0.2
CTDSPL-204ENST00000435525 KDM7AQ6ZMT4 941 aa16.33■□□□□ 0.2
CTDSPL-204ENST00000435525 OR1E3Q8WZA6 343 aa16.33■□□□□ 0.2
CTDSPL-204ENST00000435525 SCARF2Q96GP6 870 aaPredicted RBP16.33■□□□□ 0.2
CTDSPL-204ENST00000435525 CCDC77Q9BR77 488 aa16.33■□□□□ 0.2
CTDSPL-204ENST00000435525 PARD6BQ9BYG5 372 aa16.33■□□□□ 0.2
CTDSPL-204ENST00000435525 GSDMCQ9BYG8 508 aa16.33■□□□□ 0.2
CTDSPL-204ENST00000435525 CDC42EP4Q9H3Q1 356 aaKnown RBP16.33■□□□□ 0.2
CTDSPL-204ENST00000435525 SMOC1Q9H4F8 434 aa16.33■□□□□ 0.2
CTDSPL-204ENST00000435525 LRRC4CQ9HCJ2 640 aa16.33■□□□□ 0.2
CTDSPL-204ENST00000435525 TRNAU1APQ9NX07 287 aaKnown RBP16.33■□□□□ 0.2
CTDSPL-204ENST00000435525 MOCS1Q9NZB8 636 aa16.33■□□□□ 0.2
CTDSPL-204ENST00000435525 TMPRSS11EQ9UL52 423 aa16.33■□□□□ 0.2
CTDSPL-204ENST00000435525 A0A087WUV0 522 aaPredicted RBP16.32■□□□□ 0.2
CTDSPL-204ENST00000435525 ALPPL2P10696 532 aa16.32■□□□□ 0.2
CTDSPL-204ENST00000435525 POLD2P49005 469 aa16.32■□□□□ 0.2
CTDSPL-204ENST00000435525 VSNL1P62760 191 aa16.32■□□□□ 0.2
CTDSPL-204ENST00000435525 SMAD1Q15797 465 aaKnown RBP16.32■□□□□ 0.2
CTDSPL-204ENST00000435525 INSCQ1MX18 579 aa16.32■□□□□ 0.2
CTDSPL-204ENST00000435525 BCL7AQ4VC05 210 aa16.32■□□□□ 0.2
CTDSPL-204ENST00000435525 PRR23CQ6ZRP0 262 aa16.32■□□□□ 0.2
CTDSPL-204ENST00000435525 DET1Q7L5Y6 550 aa16.32■□□□□ 0.2
CTDSPL-204ENST00000435525 GALNT7Q86SF2 657 aa16.32■□□□□ 0.2
CTDSPL-204ENST00000435525 SLC26A11Q86WA9 606 aa16.32■□□□□ 0.2
CTDSPL-204ENST00000435525 GKN2Q86XP6 184 aa16.32■□□□□ 0.2
CTDSPL-204ENST00000435525 CNTN4Q8IWV2 1026 aa16.32■□□□□ 0.2
CTDSPL-204ENST00000435525 CTAGE3PQ8IX95 158 aa16.32■□□□□ 0.2
CTDSPL-204ENST00000435525 CNPY4Q8N129 248 aa16.32■□□□□ 0.2
CTDSPL-204ENST00000435525 MINDY1Q8N5J2 469 aa16.32■□□□□ 0.2
CTDSPL-204ENST00000435525 PDXPQ96GD0 296 aa16.32■□□□□ 0.2
CTDSPL-204ENST00000435525 PANX3Q96QZ0 392 aa16.32■□□□□ 0.2
CTDSPL-204ENST00000435525 CYTH2Q99418 400 aa16.32■□□□□ 0.2
CTDSPL-204ENST00000435525 WDR83Q9BRX9 315 aaKnown RBP16.32■□□□□ 0.2
CTDSPL-204ENST00000435525 EDEM2Q9BV94 578 aa16.32■□□□□ 0.2
CTDSPL-204ENST00000435525 TMEM9BQ9NQ34 198 aa16.32■□□□□ 0.2
CTDSPL-204ENST00000435525 NINJ2Q9NZG7 142 aa16.32■□□□□ 0.2
CTDSPL-204ENST00000435525 MARCH4Q9P2E8 410 aaPredicted RBP16.32■□□□□ 0.2
CTDSPL-204ENST00000435525 COMMD10Q9Y6G5 202 aa16.32■□□□□ 0.2
CTDSPL-204ENST00000435525 IKBKGQ9Y6K9 419 aa16.32■□□□□ 0.2
CTDSPL-204ENST00000435525 A0A1B0GTQ1 180 aa16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 TCRBV9S1A1TA0A576 114 aa16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 CHUKO15111 745 aa16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 DNAJC6O75061 913 aa16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 ACSL3O95573 720 aa16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 ESR1P03372 595 aa16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 ANXA6P08133 673 aa16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 ZNF883P0CG24 379 aa16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 PRSS56P0CW18 603 aa16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 RPS3P23396 243 aaKnown RBP eCLIP16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 SLC1A2P43004 574 aa16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 ADARP55265 1226 aaKnown RBP16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 EIF3BP55884 814 aaKnown RBP16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 CTBP1Q13363 440 aa16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 SF3A2Q15428 464 aaKnown RBP16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 KLHL38Q2WGJ6 581 aa16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 PYCR3Q53H96 274 aa16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 ZNF542PQ5EBM4 170 aa16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 PRRT3Q5FWE3 981 aa16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 TPRG1LQ5T0D9 272 aa16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 ZNF648Q5T619 568 aaPredicted RBP16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 TCEAL6Q6IPX3 200 aa16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 TRMT10BQ6PF06 316 aaKnown RBP16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 CRTC3Q6UUV7 619 aa16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 AMZ2Q86W34 360 aa16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 RASGEF1AQ8N9B8 481 aa16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 C2CD4AQ8NCU7 369 aaPredicted RBP16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 LMX1AQ8TE12 382 aa16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 FBF1Q8TES7 1133 aa16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 TCEAL3Q969E4 200 aa16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 SGF29Q96ES7 293 aa16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 TIMM29Q9BSF4 260 aa16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 MRPL40Q9NQ50 206 aaKnown RBP16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 IL1RAPL1Q9NZN1 696 aa16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 CORO1CQ9ULV4 474 aaPredicted RBP16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 CSNK1G3Q9Y6M4 447 aa16.31■□□□□ 0.2
CTDSPL-204ENST00000435525 FANCMQ8IYD8 2048 aa16.3■□□□□ 0.2
CTDSPL-204ENST00000435525 LNP1A1A4G5 178 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms