RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 STN1Q9H668 368 aaKnown RBP16.03■□□□□ 0.16
SMPD4-207ENST00000435455 ASB8Q9H765 288 aa16.03■□□□□ 0.16
SMPD4-207ENST00000435455 TRMT1Q9NXH9 659 aaKnown RBP16.03■□□□□ 0.16
SMPD4-207ENST00000435455 TTC7AQ9ULT0 858 aaPredicted RBP16.03■□□□□ 0.16
SMPD4-207ENST00000435455 ENTPD2Q9Y5L3 495 aa16.03■□□□□ 0.16
SMPD4-207ENST00000435455 SLC30A1Q9Y6M5 507 aa16.03■□□□□ 0.16
SMPD4-207ENST00000435455 DSPP15924 2871 aaKnown RBP16.03■□□□□ 0.16
SMPD4-207ENST00000435455 PKD1L2Q7Z442 2459 aa16.03■□□□□ 0.16
SMPD4-207ENST00000435455 KIF26BQ2KJY2 2108 aa16.03■□□□□ 0.16
SMPD4-207ENST00000435455 A0A1W2PQM1 296 aa16.02■□□□□ 0.16
SMPD4-207ENST00000435455 A6NCN8 305 aa16.02■□□□□ 0.16
SMPD4-207ENST00000435455 H7C0S8 307 aa16.02■□□□□ 0.16
SMPD4-207ENST00000435455 GPR39O43194 453 aa16.02■□□□□ 0.16
SMPD4-207ENST00000435455 SNX2O60749 519 aa16.02■□□□□ 0.16
SMPD4-207ENST00000435455 F3P13726 295 aa16.02■□□□□ 0.16
SMPD4-207ENST00000435455 ETS1P14921 441 aa16.02■□□□□ 0.16
SMPD4-207ENST00000435455 ITGALP20701 1170 aa16.02■□□□□ 0.16
SMPD4-207ENST00000435455 ALDH4A1P30038 563 aa16.02■□□□□ 0.16
SMPD4-207ENST00000435455 AKT1P31749 480 aa16.02■□□□□ 0.16
SMPD4-207ENST00000435455 RPL22P35268 128 aaKnown RBP16.02■□□□□ 0.16
SMPD4-207ENST00000435455 B4GALNT1Q00973 533 aa16.02■□□□□ 0.16
SMPD4-207ENST00000435455 CLPPQ16740 277 aaPredicted RBP16.02■□□□□ 0.16
SMPD4-207ENST00000435455 GPR33Q49SQ1 333 aa16.02■□□□□ 0.16
SMPD4-207ENST00000435455 ZNF547Q8IVP9 402 aa16.02■□□□□ 0.16
SMPD4-207ENST00000435455 PRELID2Q8N945 189 aa16.02■□□□□ 0.16
SMPD4-207ENST00000435455 GLIS1Q8NBF1 620 aa16.02■□□□□ 0.16
SMPD4-207ENST00000435455 OR52K1Q8NGK4 314 aa16.02■□□□□ 0.16
SMPD4-207ENST00000435455 SH3KBP1Q96B97 665 aa16.02■□□□□ 0.16
SMPD4-207ENST00000435455 ATXN7L3BQ96GX2 97 aa16.02■□□□□ 0.16
SMPD4-207ENST00000435455 DNAJC1Q96KC8 554 aaKnown RBP16.02■□□□□ 0.16
SMPD4-207ENST00000435455 TMEM74Q96NL1 305 aa16.02■□□□□ 0.16
SMPD4-207ENST00000435455 POLR1BQ9H9Y6 1135 aa16.02■□□□□ 0.16
SMPD4-207ENST00000435455 SARS2Q9NP81 518 aaKnown RBP16.02■□□□□ 0.16
SMPD4-207ENST00000435455 NLE1Q9NVX2 485 aaPredicted RBP16.02■□□□□ 0.16
SMPD4-207ENST00000435455 SLC23A2Q9UGH3 650 aa16.02■□□□□ 0.16
SMPD4-207ENST00000435455 CRLS1Q9UJA2 301 aa16.02■□□□□ 0.16
SMPD4-207ENST00000435455 DNMT3AQ9Y6K1 912 aaPredicted RBP16.02■□□□□ 0.16
SMPD4-207ENST00000435455 URB1O60287 2271 aaKnown RBP16.02■□□□□ 0.15
SMPD4-207ENST00000435455 TRBV23OR9-2A0A075B6M9 112 aa16.01■□□□□ 0.15
SMPD4-207ENST00000435455 AGAP14A8MT82 685 aa16.01■□□□□ 0.15
SMPD4-207ENST00000435455 PGRMC1O00264 195 aaKnown RBP16.01■□□□□ 0.15
SMPD4-207ENST00000435455 CASC3O15234 703 aaKnown RBP16.01■□□□□ 0.15
SMPD4-207ENST00000435455 PPM1DO15297 605 aa16.01■□□□□ 0.15
SMPD4-207ENST00000435455 B4GAT1O43505 415 aa16.01■□□□□ 0.15
SMPD4-207ENST00000435455 EML2O95834 649 aa16.01■□□□□ 0.15
SMPD4-207ENST00000435455 APRTP07741 180 aa16.01■□□□□ 0.15
SMPD4-207ENST00000435455 RALBP11234 206 aa16.01■□□□□ 0.15
SMPD4-207ENST00000435455 KCNJ1P48048 391 aa16.01■□□□□ 0.15
SMPD4-207ENST00000435455 LSSP48449 732 aa16.01■□□□□ 0.15
SMPD4-207ENST00000435455 INHBCP55103 352 aa16.01■□□□□ 0.15
SMPD4-207ENST00000435455 OR1D5P58170 312 aa16.01■□□□□ 0.15
SMPD4-207ENST00000435455 TMPRSS15P98073 1019 aa16.01■□□□□ 0.15
SMPD4-207ENST00000435455 SKIDA1Q1XH10 827 aa16.01■□□□□ 0.15
SMPD4-207ENST00000435455 PLA2G4EQ3MJ16 856 aa16.01■□□□□ 0.15
SMPD4-207ENST00000435455 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.01■□□□□ 0.15
SMPD4-207ENST00000435455 TMEM220Q6QAJ8 160 aa16.01■□□□□ 0.15
SMPD4-207ENST00000435455 SNX20Q7Z614 316 aa16.01■□□□□ 0.15
SMPD4-207ENST00000435455 C11orf96Q7Z7L8 435 aa16.01■□□□□ 0.15
SMPD4-207ENST00000435455 SLC9B2Q86UD5 537 aa16.01■□□□□ 0.15
SMPD4-207ENST00000435455 PIM3Q86V86 326 aa16.01■□□□□ 0.15
SMPD4-207ENST00000435455 LSMEM2Q8N112 164 aa16.01■□□□□ 0.15
SMPD4-207ENST00000435455 RASGEF1AQ8N9B8 481 aa16.01■□□□□ 0.15
SMPD4-207ENST00000435455 HEXDCQ8WVB3 486 aa16.01■□□□□ 0.15
SMPD4-207ENST00000435455 LIN37Q96GY3 246 aaPredicted RBP16.01■□□□□ 0.15
SMPD4-207ENST00000435455 STRADBQ9C0K7 418 aa16.01■□□□□ 0.15
SMPD4-207ENST00000435455 EIF2B3Q9NR50 452 aaKnown RBP16.01■□□□□ 0.15
SMPD4-207ENST00000435455 PIH1D1Q9NWS0 290 aaKnown RBP16.01■□□□□ 0.15
SMPD4-207ENST00000435455 DNAJC16Q9Y2G8 782 aa16.01■□□□□ 0.15
SMPD4-207ENST00000435455 CCDC187A0A096LP49 1063 aa16■□□□□ 0.15
SMPD4-207ENST00000435455 HEATR9A2RTY3 570 aa16■□□□□ 0.15
SMPD4-207ENST00000435455 KLHL33A6NCF5 533 aa16■□□□□ 0.15
SMPD4-207ENST00000435455 MROH6A6NGR9 719 aa16■□□□□ 0.15
SMPD4-207ENST00000435455 PRR19A6NJB7 356 aa16■□□□□ 0.15
SMPD4-207ENST00000435455 SRRM3A6NNA2 597 aaPredicted RBP16■□□□□ 0.15
SMPD4-207ENST00000435455 PDZK1P1A8MUH7 402 aa16■□□□□ 0.15
SMPD4-207ENST00000435455 CFAP99D6REC4 459 aa16■□□□□ 0.15
SMPD4-207ENST00000435455 CES2O00748 559 aa16■□□□□ 0.15
SMPD4-207ENST00000435455 BRINP1O60477 761 aa16■□□□□ 0.15
SMPD4-207ENST00000435455 CPNE6O95741 557 aa16■□□□□ 0.15
SMPD4-207ENST00000435455 ZSCAN5DPP0CG00 497 aa16■□□□□ 0.15
SMPD4-207ENST00000435455 IDSP22304 550 aa16■□□□□ 0.15
SMPD4-207ENST00000435455 PSMA3P25788 255 aa16■□□□□ 0.15
SMPD4-207ENST00000435455 CCKBRP32239 447 aa16■□□□□ 0.15
SMPD4-207ENST00000435455 CA5AP35218 305 aa16■□□□□ 0.15
SMPD4-207ENST00000435455 PDX1P52945 283 aa16■□□□□ 0.15
SMPD4-207ENST00000435455 GABREP78334 506 aa16■□□□□ 0.15
SMPD4-207ENST00000435455 GPLD1P80108 840 aa16■□□□□ 0.15
SMPD4-207ENST00000435455 CDK16Q00536 496 aa16■□□□□ 0.15
SMPD4-207ENST00000435455 HHEXQ03014 270 aa16■□□□□ 0.15
SMPD4-207ENST00000435455 SQSTM1Q13501 440 aa16■□□□□ 0.15
SMPD4-207ENST00000435455 AMZ1Q400G9 498 aa16■□□□□ 0.15
SMPD4-207ENST00000435455 MAP9Q49MG5 647 aa16■□□□□ 0.15
SMPD4-207ENST00000435455 AGAP9Q5VTM2 703 aa16■□□□□ 0.15
SMPD4-207ENST00000435455 WASH2PQ6VEQ5 465 aa16■□□□□ 0.15
SMPD4-207ENST00000435455 PRUNE1Q86TP1 453 aa16■□□□□ 0.15
SMPD4-207ENST00000435455 AMZ2Q86W34 360 aa16■□□□□ 0.15
SMPD4-207ENST00000435455 NXPE1Q8N323 547 aa16■□□□□ 0.15
SMPD4-207ENST00000435455 WDR36Q8NI36 951 aaKnown RBP16■□□□□ 0.15
SMPD4-207ENST00000435455 DCUN1D1Q96GG9 259 aa16■□□□□ 0.15
SMPD4-207ENST00000435455 OSBPL9Q96SU4 736 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms