RNA–Protein interactions for RNA: ENST00000434418.2

LINC01090-202, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 560 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-202ENST00000434418 LRIG1Q96JA1 1093 aa10.04□□□□□ -0.8
LINC01090-202ENST00000434418 SEPT11Q9NVA2 429 aaKnown RBP10.04□□□□□ -0.8
LINC01090-202ENST00000434418 SIK3Q9Y2K2 1263 aa10.04□□□□□ -0.8
LINC01090-202ENST00000434418 PCDHGA1Q9Y5H4 931 aa10.04□□□□□ -0.8
LINC01090-202ENST00000434418 ACACAQ13085 2346 aa10.04□□□□□ -0.8
LINC01090-202ENST00000434418 A0A0G2JNJ9 132 aa10.03□□□□□ -0.8
LINC01090-202ENST00000434418 POM121BA6NF01 834 aa10.03□□□□□ -0.8
LINC01090-202ENST00000434418 CD160O95971 181 aa10.03□□□□□ -0.8
LINC01090-202ENST00000434418 PAK4O96013 591 aaPredicted RBP10.03□□□□□ -0.8
LINC01090-202ENST00000434418 LSP1P33241 339 aa10.03□□□□□ -0.8
LINC01090-202ENST00000434418 RFC1P35251 1148 aaPredicted RBP10.03□□□□□ -0.8
LINC01090-202ENST00000434418 STAT1P42224 750 aa10.03□□□□□ -0.8
LINC01090-202ENST00000434418 NSFP46459 744 aaKnown RBP10.03□□□□□ -0.8
LINC01090-202ENST00000434418 COPB1P53618 953 aaKnown RBP10.03□□□□□ -0.8
LINC01090-202ENST00000434418 TMPRSS15P98073 1019 aa10.03□□□□□ -0.8
LINC01090-202ENST00000434418 SEMG2Q02383 582 aa10.03□□□□□ -0.8
LINC01090-202ENST00000434418 CCDC15Q0P6D6 951 aa10.03□□□□□ -0.8
LINC01090-202ENST00000434418 PTP4A2Q12974 167 aa10.03□□□□□ -0.8
LINC01090-202ENST00000434418 ARL13BQ3SXY8 428 aa10.03□□□□□ -0.8
LINC01090-202ENST00000434418 LRRC73Q5JTD7 316 aa10.03□□□□□ -0.8
LINC01090-202ENST00000434418 ATXN7L2Q5T6C5 722 aaPredicted RBP10.03□□□□□ -0.8
LINC01090-202ENST00000434418 NEK5Q6P3R8 708 aa10.03□□□□□ -0.8
LINC01090-202ENST00000434418 Q6ZSR6 202 aa10.03□□□□□ -0.8
LINC01090-202ENST00000434418 ARCQ7LC44 396 aa10.03□□□□□ -0.8
LINC01090-202ENST00000434418 NLRP14Q86W24 1093 aa10.03□□□□□ -0.8
LINC01090-202ENST00000434418 ZNF677Q86XU0 584 aa10.03□□□□□ -0.8
LINC01090-202ENST00000434418 ZNF354CQ86Y25 554 aa10.03□□□□□ -0.8
LINC01090-202ENST00000434418 REXO1L1PQ8IX06 675 aa10.03□□□□□ -0.8
LINC01090-202ENST00000434418 CLRN3Q8NCR9 226 aa10.03□□□□□ -0.8
LINC01090-202ENST00000434418 NXPE2Q96DL1 559 aa10.03□□□□□ -0.8
LINC01090-202ENST00000434418 TBC1D31Q96DN5 1066 aa10.03□□□□□ -0.8
LINC01090-202ENST00000434418 HEPHQ9BQS7 1158 aa10.03□□□□□ -0.8
LINC01090-202ENST00000434418 SLC17A9Q9BYT1 436 aa10.03□□□□□ -0.8
LINC01090-202ENST00000434418 DNAJC28Q9NX36 388 aa10.03□□□□□ -0.8
LINC01090-202ENST00000434418 ADAM22Q9P0K1 906 aa10.03□□□□□ -0.8
LINC01090-202ENST00000434418 DKK4Q9UBT3 224 aa10.03□□□□□ -0.8
LINC01090-202ENST00000434418 Q9UFV3 132 aa10.03□□□□□ -0.8
LINC01090-202ENST00000434418 FADS3Q9Y5Q0 445 aa10.03□□□□□ -0.8
LINC01090-202ENST00000434418 CHD5Q8TDI0 1954 aa10.03□□□□□ -0.8
LINC01090-202ENST00000434418 TRPM6Q9BX84 2022 aa10.02□□□□□ -0.8
LINC01090-202ENST00000434418 IGLON5A6NGN9 336 aa10.02□□□□□ -0.81
LINC01090-202ENST00000434418 A6NNZ2 444 aa10.02□□□□□ -0.81
LINC01090-202ENST00000434418 LGALS16A8MUM7 142 aa10.02□□□□□ -0.81
LINC01090-202ENST00000434418 CCP110O43303 1012 aa10.02□□□□□ -0.81
LINC01090-202ENST00000434418 RAMP2O60895 175 aa10.02□□□□□ -0.81
LINC01090-202ENST00000434418 PIAS2O75928 621 aa10.02□□□□□ -0.81
LINC01090-202ENST00000434418 NEBLO76041 1014 aa10.02□□□□□ -0.81
LINC01090-202ENST00000434418 UGT2B4P06133 528 aa10.02□□□□□ -0.81
LINC01090-202ENST00000434418 PLEKP08567 350 aaPredicted RBP10.02□□□□□ -0.81
LINC01090-202ENST00000434418 C1SP09871 688 aa10.02□□□□□ -0.81
LINC01090-202ENST00000434418 KRT3P12035 628 aa10.02□□□□□ -0.81
LINC01090-202ENST00000434418 UNGP13051 313 aaPredicted RBP10.02□□□□□ -0.81
LINC01090-202ENST00000434418 GPD1P21695 349 aa10.02□□□□□ -0.81
LINC01090-202ENST00000434418 PTPN9P43378 593 aa10.02□□□□□ -0.81
LINC01090-202ENST00000434418 RPS21P63220 83 aaKnown RBP10.02□□□□□ -0.81
LINC01090-202ENST00000434418 ADCY2Q08462 1091 aa10.02□□□□□ -0.81
LINC01090-202ENST00000434418 BORAQ6PGQ7 559 aa10.02□□□□□ -0.81
LINC01090-202ENST00000434418 TRIM72Q6ZMU5 477 aa10.02□□□□□ -0.81
LINC01090-202ENST00000434418 STRADAQ7RTN6 431 aa10.02□□□□□ -0.81
LINC01090-202ENST00000434418 ABI3BPQ7Z7G0 1075 aa10.02□□□□□ -0.81
LINC01090-202ENST00000434418 NEK11Q8NG66 645 aa10.02□□□□□ -0.81
LINC01090-202ENST00000434418 OR5AN1Q8NGI8 311 aa10.02□□□□□ -0.81
LINC01090-202ENST00000434418 OR4C6Q8NH72 309 aa10.02□□□□□ -0.81
LINC01090-202ENST00000434418 ARHGEF2Q92974 986 aaKnown RBP10.02□□□□□ -0.81
LINC01090-202ENST00000434418 MCEEQ96PE7 176 aa10.02□□□□□ -0.81
LINC01090-202ENST00000434418 SELENOOQ9BVL4 669 aa10.02□□□□□ -0.81
LINC01090-202ENST00000434418 KLC2Q9H0B6 622 aa10.02□□□□□ -0.81
LINC01090-202ENST00000434418 KLHL11Q9NVR0 708 aa10.02□□□□□ -0.81
LINC01090-202ENST00000434418 TMEM51Q9NW97 253 aa10.02□□□□□ -0.81
LINC01090-202ENST00000434418 TMEM248Q9NWD8 314 aa10.02□□□□□ -0.81
LINC01090-202ENST00000434418 C16orf96A6NNT2 1141 aa10.01□□□□□ -0.81
LINC01090-202ENST00000434418 KDM1AO60341 852 aa10.01□□□□□ -0.81
LINC01090-202ENST00000434418 TMCC1O94876 653 aa10.01□□□□□ -0.81
LINC01090-202ENST00000434418 GIMD1P0DJR0 217 aa10.01□□□□□ -0.81
LINC01090-202ENST00000434418 CDK4P11802 303 aa10.01□□□□□ -0.81
LINC01090-202ENST00000434418 ACP1P24666 158 aa10.01□□□□□ -0.81
LINC01090-202ENST00000434418 ITPKBP27987 946 aa10.01□□□□□ -0.81
LINC01090-202ENST00000434418 EPHB2P29323 1055 aa10.01□□□□□ -0.81
LINC01090-202ENST00000434418 ANP32AP39687 249 aaKnown RBP10.01□□□□□ -0.81
LINC01090-202ENST00000434418 MYL5Q02045 173 aa10.01□□□□□ -0.81
LINC01090-202ENST00000434418 UBXN1Q04323 297 aa10.01□□□□□ -0.81
LINC01090-202ENST00000434418 SLC20A2Q08357 652 aa10.01□□□□□ -0.81
LINC01090-202ENST00000434418 FZD2Q14332 565 aa10.01□□□□□ -0.81
LINC01090-202ENST00000434418 USP10Q14694 798 aaKnown RBP10.01□□□□□ -0.81
LINC01090-202ENST00000434418 POLD3Q15054 466 aaPredicted RBP10.01□□□□□ -0.81
LINC01090-202ENST00000434418 STX1AQ16623 288 aa10.01□□□□□ -0.81
LINC01090-202ENST00000434418 HS1BP3Q53T59 392 aa10.01□□□□□ -0.81
LINC01090-202ENST00000434418 ZNF805Q5CZA5 627 aa10.01□□□□□ -0.81
LINC01090-202ENST00000434418 TPRG1LQ5T0D9 272 aa10.01□□□□□ -0.81
LINC01090-202ENST00000434418 KIAA1161Q6NSJ0 714 aa10.01□□□□□ -0.81
LINC01090-202ENST00000434418 SCYL2Q6P3W7 929 aa10.01□□□□□ -0.81
LINC01090-202ENST00000434418 WDR59Q6PJI9 974 aa10.01□□□□□ -0.81
LINC01090-202ENST00000434418 SASS6Q6UVJ0 657 aa10.01□□□□□ -0.81
LINC01090-202ENST00000434418 KYAT3Q6YP21 454 aaKnown RBP10.01□□□□□ -0.81
LINC01090-202ENST00000434418 CLEC17AQ6ZS10 378 aa10.01□□□□□ -0.81
LINC01090-202ENST00000434418 RBM43Q6ZSC3 357 aaKnown RBP10.01□□□□□ -0.81
LINC01090-202ENST00000434418 MON1BQ7L1V2 547 aa10.01□□□□□ -0.81
LINC01090-202ENST00000434418 LGI4Q8N135 537 aa10.01□□□□□ -0.81
LINC01090-202ENST00000434418 ZNF548Q8NEK5 533 aaPredicted RBP10.01□□□□□ -0.81
LINC01090-202ENST00000434418 OR2AP1Q8NGE2 309 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms