RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 PRKCZQ05513 592 aa11.7□□□□□ -0.54
CD44-209ENST00000433892 ATP6AP1Q15904 470 aa11.7□□□□□ -0.54
CD44-209ENST00000433892 ZRANB3Q5FWF4 1079 aa11.7□□□□□ -0.54
CD44-209ENST00000433892 CTSL3PQ5NE16 218 aa11.7□□□□□ -0.54
CD44-209ENST00000433892 ACBD5Q5T8D3 534 aaPredicted RBP11.7□□□□□ -0.54
CD44-209ENST00000433892 GPSM1Q86YR5 675 aa11.7□□□□□ -0.54
CD44-209ENST00000433892 CPNE9Q8IYJ1 553 aa11.7□□□□□ -0.54
CD44-209ENST00000433892 ALDH16A1Q8IZ83 802 aa11.7□□□□□ -0.54
CD44-209ENST00000433892 FNDC5Q8NAU1 212 aa11.7□□□□□ -0.54
CD44-209ENST00000433892 OR52B6Q8NGF0 335 aa11.7□□□□□ -0.54
CD44-209ENST00000433892 FBXL20Q96IG2 436 aa11.7□□□□□ -0.54
CD44-209ENST00000433892 HBEGFQ99075 208 aa11.7□□□□□ -0.54
CD44-209ENST00000433892 TDRD1Q9BXT4 1180 aaKnown RBP11.7□□□□□ -0.54
CD44-209ENST00000433892 NACA2Q9H009 215 aa11.7□□□□□ -0.54
CD44-209ENST00000433892 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.7□□□□□ -0.54
CD44-209ENST00000433892 ZFC3H1O60293 1989 aaKnown RBP11.69□□□□□ -0.54
CD44-209ENST00000433892 ANKRD36A6QL64 1941 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 NT5C1B-RDH14C9J2C7 533 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 H3BNC9 293 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 E2F3O00716 465 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 KLK8O60259 260 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 EEDO75530 441 aaKnown RBP11.69□□□□□ -0.54
CD44-209ENST00000433892 C1RP00736 705 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 ZDHHC11BP0C7U3 371 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 CR2P20023 1033 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 LPOP22079 712 aaPredicted RBP11.69□□□□□ -0.54
CD44-209ENST00000433892 MYF6P23409 242 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 GATMP50440 423 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 SGSHP51688 502 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 KPNA1P52294 538 aaPredicted RBP11.69□□□□□ -0.54
CD44-209ENST00000433892 IL2P60568 153 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 GPR17Q13304 367 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 SLC36A3Q495N2 470 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 C6orf136Q5SQH8 315 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 NANOGP8Q6NSW7 305 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 TXNDC11Q6PKC3 985 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 GPRIN3Q6ZVF9 776 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 DENND1CQ8IV53 801 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 OFCC1Q8IZS5 231 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 TMEM199Q8N511 208 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 GOLM1Q8NBJ4 401 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 OR56A4Q8NGH8 313 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 CD200R1Q8TD46 325 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 TSPEARQ8WU66 669 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 SPATA17Q96L03 361 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 SEPHS2Q99611 448 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 C1QTNF3Q9BXJ4 246 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 NUSAP1Q9BXS6 441 aaKnown RBP11.69□□□□□ -0.54
CD44-209ENST00000433892 BRINP2Q9C0B6 783 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 NANOGQ9H9S0 305 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 AGO1Q9UL18 857 aaKnown RBP11.69□□□□□ -0.54
CD44-209ENST00000433892 TMCO1Q9UM00 188 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 RAI2Q9Y5P3 530 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 TCRBV5S2A0A599 114 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 KDELR3O43731 214 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 SYNCRIPO60506 623 aaKnown RBP11.69□□□□□ -0.54
CD44-209ENST00000433892 RASAL1O95294 804 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 GJB5O95377 273 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 BMP10O95393 424 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 ELNP15502 786 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 RFC2P35250 354 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 CDH4P55283 916 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 FCGRTP55899 365 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 ERVK-8P63133 956 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 FAM189BP81408 668 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 RTP2Q5QGT7 225 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 SLC2A7Q6PXP3 512 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 TRAF7Q6Q0C0 670 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 PTRH1Q86Y79 214 aaKnown RBP11.69□□□□□ -0.54
CD44-209ENST00000433892 TTC16Q8NEE8 873 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 PROKR1Q8TCW9 393 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 NUDT8Q8WV74 236 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 PLEKHG4BQ96PX9 1271 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 SOX17Q9H6I2 414 aaPredicted RBP11.69□□□□□ -0.54
CD44-209ENST00000433892 TIMMDC1Q9NPL8 285 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 SUN2Q9UH99 717 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 LEF1Q9UJU2 399 aaPredicted RBP11.69□□□□□ -0.54
CD44-209ENST00000433892 DNMT3LQ9UJW3 386 aa11.69□□□□□ -0.54
CD44-209ENST00000433892 ARIH1Q9Y4X5 557 aaPredicted RBP11.69□□□□□ -0.54
CD44-209ENST00000433892 LAMA3Q16787 3333 aa11.68□□□□□ -0.54
CD44-209ENST00000433892 A0A087WXM4 84 aa11.68□□□□□ -0.54
CD44-209ENST00000433892 SLC38A8A6NNN8 435 aa11.68□□□□□ -0.54
CD44-209ENST00000433892 ANKRD66B4E2M5 251 aa11.68□□□□□ -0.54
CD44-209ENST00000433892 E5RI56 91 aa11.68□□□□□ -0.54
CD44-209ENST00000433892 PRKAR2AP13861 404 aaKnown RBP11.68□□□□□ -0.54
CD44-209ENST00000433892 ATF6P18850 670 aa11.68□□□□□ -0.54
CD44-209ENST00000433892 ATP5C1P36542 298 aaKnown RBP11.68□□□□□ -0.54
CD44-209ENST00000433892 SLC11A2P49281 568 aa11.68□□□□□ -0.54
CD44-209ENST00000433892 TTPAP49638 278 aa11.68□□□□□ -0.54
CD44-209ENST00000433892 ERVPABLB-1P60509 514 aa11.68□□□□□ -0.54
CD44-209ENST00000433892 HPCAP84074 193 aa11.68□□□□□ -0.54
CD44-209ENST00000433892 GRIK2Q13002 908 aa11.68□□□□□ -0.54
CD44-209ENST00000433892 TGFBIQ15582 683 aa11.68□□□□□ -0.54
CD44-209ENST00000433892 C18orf21Q32NC0 220 aaPredicted RBP11.68□□□□□ -0.54
CD44-209ENST00000433892 C5orf22Q49AR2 442 aa11.68□□□□□ -0.54
CD44-209ENST00000433892 KCTD21Q4G0X4 260 aa11.68□□□□□ -0.54
CD44-209ENST00000433892 ATP6AP1LQ52LC2 224 aa11.68□□□□□ -0.54
CD44-209ENST00000433892 TMTC4Q5T4D3 741 aa11.68□□□□□ -0.54
CD44-209ENST00000433892 LETMD1Q6P1Q0 360 aa11.68□□□□□ -0.54
CD44-209ENST00000433892 LINGO4Q6UY18 593 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms