RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 CACNA1HO95180 2353 aa15.17■□□□□ 0.02
CNOT9-205ENST00000433439 PI4KAP42356 2102 aa15.16■□□□□ 0.02
CNOT9-205ENST00000433439 PFDN6O15212 129 aa15.16■□□□□ 0.02
CNOT9-205ENST00000433439 VEGFDO43915 354 aa15.16■□□□□ 0.02
CNOT9-205ENST00000433439 SDC3O75056 442 aa15.16■□□□□ 0.02
CNOT9-205ENST00000433439 SPAG6O75602 509 aa15.16■□□□□ 0.02
CNOT9-205ENST00000433439 TNFP01375 233 aa15.16■□□□□ 0.02
CNOT9-205ENST00000433439 SYPP08247 313 aa15.16■□□□□ 0.02
CNOT9-205ENST00000433439 CTSEP14091 401 aa15.16■□□□□ 0.02
CNOT9-205ENST00000433439 JUNDP17535 347 aa15.16■□□□□ 0.02
CNOT9-205ENST00000433439 OGNP20774 298 aaKnown RBP15.16■□□□□ 0.02
CNOT9-205ENST00000433439 PBLDP30039 288 aaPredicted RBP15.16■□□□□ 0.02
CNOT9-205ENST00000433439 STX2P32856 288 aa15.16■□□□□ 0.02
CNOT9-205ENST00000433439 CTSKP43235 329 aa15.16■□□□□ 0.02
CNOT9-205ENST00000433439 ATXN3P54252 364 aaPredicted RBP15.16■□□□□ 0.02
CNOT9-205ENST00000433439 EIF3BP55884 814 aaKnown RBP15.16■□□□□ 0.02
CNOT9-205ENST00000433439 B4GALNT1Q00973 533 aa15.16■□□□□ 0.02
CNOT9-205ENST00000433439 IL9RQ01113 521 aa15.16■□□□□ 0.02
CNOT9-205ENST00000433439 ITIH4Q14624 930 aa15.16■□□□□ 0.02
CNOT9-205ENST00000433439 PLA2G4EQ3MJ16 856 aa15.16■□□□□ 0.02
CNOT9-205ENST00000433439 TEDDM1Q5T9Z0 273 aa15.16■□□□□ 0.02
CNOT9-205ENST00000433439 TMEM220Q6QAJ8 160 aa15.16■□□□□ 0.02
CNOT9-205ENST00000433439 CILP2Q8IUL8 1156 aa15.16■□□□□ 0.02
CNOT9-205ENST00000433439 RELL1Q8IUW5 271 aa15.16■□□□□ 0.02
CNOT9-205ENST00000433439 PHACTR4Q8IZ21 702 aa15.16■□□□□ 0.02
CNOT9-205ENST00000433439 CLDN19Q8N6F1 224 aa15.16■□□□□ 0.02
CNOT9-205ENST00000433439 PPM1NQ8N819 430 aa15.16■□□□□ 0.02
CNOT9-205ENST00000433439 GPR150Q8NGU9 434 aa15.16■□□□□ 0.02
CNOT9-205ENST00000433439 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.16■□□□□ 0.02
CNOT9-205ENST00000433439 CDKL2Q92772 493 aa15.16■□□□□ 0.02
CNOT9-205ENST00000433439 TCEAL2Q9H3H9 227 aaPredicted RBP15.16■□□□□ 0.02
CNOT9-205ENST00000433439 SMYD2Q9NRG4 433 aa15.16■□□□□ 0.02
CNOT9-205ENST00000433439 GPR27Q9NS67 375 aa15.16■□□□□ 0.02
CNOT9-205ENST00000433439 MOCS1Q9NZB8 636 aa15.16■□□□□ 0.02
CNOT9-205ENST00000433439 FAM8A1Q9UBU6 413 aa15.16■□□□□ 0.02
CNOT9-205ENST00000433439 RAB21Q9UL25 225 aa15.16■□□□□ 0.02
CNOT9-205ENST00000433439 PNMA8BQ9ULN7 279 aaPredicted RBP15.16■□□□□ 0.02
CNOT9-205ENST00000433439 SLC17A4Q9Y2C5 497 aa15.16■□□□□ 0.02
CNOT9-205ENST00000433439 CRYL1Q9Y2S2 319 aa15.16■□□□□ 0.02
CNOT9-205ENST00000433439 PRSS21Q9Y6M0 314 aa15.16■□□□□ 0.02
CNOT9-205ENST00000433439 TP53BP1Q12888 1972 aaPredicted RBP15.16■□□□□ 0.02
CNOT9-205ENST00000433439 ARHGAP33O14559 1287 aa15.15■□□□□ 0.02
CNOT9-205ENST00000433439 NUAK1O60285 661 aa15.15■□□□□ 0.02
CNOT9-205ENST00000433439 FUCA1P04066 466 aa15.15■□□□□ 0.02
CNOT9-205ENST00000433439 TUBBP07437 444 aa15.15■□□□□ 0.02
CNOT9-205ENST00000433439 ATP1B2P14415 290 aaPredicted RBP15.15■□□□□ 0.02
CNOT9-205ENST00000433439 ZNF7P17097 686 aaPredicted RBP15.15■□□□□ 0.02
CNOT9-205ENST00000433439 ENGP17813 658 aa15.15■□□□□ 0.02
CNOT9-205ENST00000433439 ITGB6P18564 788 aa15.15■□□□□ 0.02
CNOT9-205ENST00000433439 FMO4P31512 558 aa15.15■□□□□ 0.02
CNOT9-205ENST00000433439 NSG1P42857 185 aa15.15■□□□□ 0.02
CNOT9-205ENST00000433439 ABCG1P45844 678 aa15.15■□□□□ 0.02
CNOT9-205ENST00000433439 CTSCP53634 463 aa15.15■□□□□ 0.02
CNOT9-205ENST00000433439 C1orf61Q13536 156 aa15.15■□□□□ 0.02
CNOT9-205ENST00000433439 EFTUD2Q15029 972 aaKnown RBP eCLIP15.15■□□□□ 0.022e-6■■■■■ 47
CNOT9-205ENST00000433439 HLA-BQ31612 363 aa15.15■□□□□ 0.02
CNOT9-205ENST00000433439 KBTBD12Q3ZCT8 623 aa15.15■□□□□ 0.02
CNOT9-205ENST00000433439 ZNF789Q5FWF6 425 aa15.15■□□□□ 0.02
CNOT9-205ENST00000433439 PLA2G2CQ5R387 149 aa15.15■□□□□ 0.02
CNOT9-205ENST00000433439 TRMT10CQ7L0Y3 403 aaKnown RBP15.15■□□□□ 0.02
CNOT9-205ENST00000433439 CHST15Q7LFX5 561 aaPredicted RBP15.15■□□□□ 0.02
CNOT9-205ENST00000433439 GALNT13Q8IUC8 556 aa15.15■□□□□ 0.02
CNOT9-205ENST00000433439 LMNTD2Q8IXW0 634 aa15.15■□□□□ 0.02
CNOT9-205ENST00000433439 BEND7Q8N7W2 519 aaPredicted RBP15.15■□□□□ 0.02
CNOT9-205ENST00000433439 MYRIPQ8NFW9 859 aa15.15■□□□□ 0.02
CNOT9-205ENST00000433439 HEXDCQ8WVB3 486 aa15.15■□□□□ 0.02
CNOT9-205ENST00000433439 ATXN7L3BQ96GX2 97 aa15.15■□□□□ 0.02
CNOT9-205ENST00000433439 SLC13A1Q9BZW2 595 aa15.15■□□□□ 0.02
CNOT9-205ENST00000433439 CLPBQ9H078 707 aa15.15■□□□□ 0.02
CNOT9-205ENST00000433439 GAREM1Q9H706 876 aa15.15■□□□□ 0.02
CNOT9-205ENST00000433439 SEMA4GQ9NTN9 838 aa15.15■□□□□ 0.02
CNOT9-205ENST00000433439 VPS18Q9P253 973 aa15.15■□□□□ 0.02
CNOT9-205ENST00000433439 APOBEC3BQ9UH17 382 aaKnown RBP15.15■□□□□ 0.02
CNOT9-205ENST00000433439 KLF15Q9UIH9 416 aa15.15■□□□□ 0.02
CNOT9-205ENST00000433439 PCYT1BQ9Y5K3 369 aaPredicted RBP15.15■□□□□ 0.02
CNOT9-205ENST00000433439 TMEM131Q92545 1883 aa15.14■□□□□ 0.01
CNOT9-205ENST00000433439 TDRD6O60522 2096 aaKnown RBP15.14■□□□□ 0.01
CNOT9-205ENST00000433439 CXorf49A8MYA2 514 aaPredicted RBP15.14■□□□□ 0.01
CNOT9-205ENST00000433439 H3BM21 787 aa15.14■□□□□ 0.01
CNOT9-205ENST00000433439 TNFRSF10CO14798 259 aa15.14■□□□□ 0.01
CNOT9-205ENST00000433439 RIPK2O43353 540 aa15.14■□□□□ 0.01
CNOT9-205ENST00000433439 GRID2O43424 1007 aa15.14■□□□□ 0.01
CNOT9-205ENST00000433439 DNAJC6O75061 913 aa15.14■□□□□ 0.01
CNOT9-205ENST00000433439 HAUS5O94927 633 aa15.14■□□□□ 0.01
CNOT9-205ENST00000433439 S1PR4O95977 384 aa15.14■□□□□ 0.01
CNOT9-205ENST00000433439 IVLP07476 585 aa15.14■□□□□ 0.01
CNOT9-205ENST00000433439 ZNF806P0C7X5 589 aa15.14■□□□□ 0.01
CNOT9-205ENST00000433439 BLKP51451 505 aa15.14■□□□□ 0.01
CNOT9-205ENST00000433439 HK3P52790 923 aa15.14■□□□□ 0.01
CNOT9-205ENST00000433439 UAP1Q16222 522 aaPredicted RBP15.14■□□□□ 0.01
CNOT9-205ENST00000433439 TYSND1Q2T9J0 566 aa15.14■□□□□ 0.01
CNOT9-205ENST00000433439 MAP9Q49MG5 647 aa15.14■□□□□ 0.01
CNOT9-205ENST00000433439 RNF187Q5TA31 235 aaPredicted RBP15.14■□□□□ 0.01
CNOT9-205ENST00000433439 PTRHD1Q6GMV3 140 aaKnown RBP15.14■□□□□ 0.01
CNOT9-205ENST00000433439 CNSTQ6PJW8 725 aa15.14■□□□□ 0.01
CNOT9-205ENST00000433439 LRRTM4Q86VH4 590 aa15.14■□□□□ 0.01
CNOT9-205ENST00000433439 C2CD4AQ8NCU7 369 aaPredicted RBP15.14■□□□□ 0.01
CNOT9-205ENST00000433439 AENQ8WTP8 325 aaKnown RBP15.14■□□□□ 0.01
CNOT9-205ENST00000433439 OR2M4Q96R27 311 aa15.14■□□□□ 0.01
CNOT9-205ENST00000433439 TCF12Q99081 682 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms