RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 PCDHAC2Q9Y5I4 1007 aa2.11□□□□□ -2.07
CDC40-204ENST00000431461 SNX9Q9Y5X1 595 aa2.11□□□□□ -2.07
CDC40-204ENST00000431461 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.11□□□□□ -2.07
CDC40-204ENST00000431461 PTPRCP08575 1304 aa2.11□□□□□ -2.07
CDC40-204ENST00000431461 COL2A1P02458 1487 aaPredicted RBP2.1□□□□□ -2.07
CDC40-204ENST00000431461 IGHV4OR15-8A0A075B7B6 117 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 PLSCR5A0PG75 271 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 AGAP14A8MT82 685 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 H0YIN7 160 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 SOCS6O14544 535 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 ATP2A1O14983 1001 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 DOK2O60496 412 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 PRAMEF11O60813 436 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 AVILO75366 819 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 TPPPO94811 219 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 OR2C1O95371 312 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 PMS2P2O95744 297 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 STARD3NLO95772 234 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 CYC1P08574 325 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 LINC00271P0C7V0 271 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 RARGP13631 454 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 IL7RP16871 459 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 GABRB1P18505 474 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 POLR2CP19387 275 aaPredicted RBP2.1□□□□□ -2.07
CDC40-204ENST00000431461 ANXA7P20073 488 aaKnown RBP2.1□□□□□ -2.07
CDC40-204ENST00000431461 ANOS1P23352 680 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 NR2F2P24468 414 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 ACADLP28330 430 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 PIGAP37287 484 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 STAT2P52630 851 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 SNX16P57768 344 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 PLIN5Q00G26 463 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 SLC20A2Q08357 652 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 GRSF1Q12849 480 aaKnown RBP eCLIP2.1□□□□□ -2.07
CDC40-204ENST00000431461 ZNF155Q12901 538 aaPredicted RBP2.1□□□□□ -2.07
CDC40-204ENST00000431461 DLG1Q12959 904 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 COASYQ13057 564 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 DHX34Q14147 1143 aaKnown RBP2.1□□□□□ -2.07
CDC40-204ENST00000431461 KRT33BQ14525 404 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 EFNB3Q15768 340 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 CCDC6Q16204 474 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 C2orf68Q2NKX9 166 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 IRAK1BP1Q5VVH5 260 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 WBP2NLQ6ICG8 309 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 LCN10Q6JVE6 187 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 ANKRD54Q6NXT1 300 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 RHBDF2Q6PJF5 856 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 TMCO3Q6UWJ1 677 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 ARMC9Q7Z3E5 817 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 HAPLN4Q86UW8 402 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 MAML2Q8IZL2 1156 aaPredicted RBP2.1□□□□□ -2.07
CDC40-204ENST00000431461 SYT2Q8N9I0 419 aaPredicted RBP2.1□□□□□ -2.07
CDC40-204ENST00000431461 POC5Q8NA72 575 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 SLC38A9Q8NBW4 561 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 ZNF114Q8NC26 417 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 DBF4BQ8NFT6 615 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 LNX1Q8TBB1 728 aaPredicted RBP2.1□□□□□ -2.07
CDC40-204ENST00000431461 HM13Q8TCT9 377 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 UTP15Q8TED0 518 aaKnown RBP2.1□□□□□ -2.07
CDC40-204ENST00000431461 FIG4Q92562 907 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 ERLEC1Q96DZ1 483 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 SCRN2Q96FV2 425 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 TMEM19Q96HH6 336 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 C3orf30Q96M34 536 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 CEP295NLQ96MC4 621 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 MTERF1Q99551 399 aaKnown RBP2.1□□□□□ -2.07
CDC40-204ENST00000431461 PITPNM3Q9BZ71 974 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 FTOQ9C0B1 505 aaKnown RBP eCLIP2.1□□□□□ -2.07
CDC40-204ENST00000431461 TKTL2Q9H0I9 626 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 DENND2DQ9H6A0 471 aaPredicted RBP2.1□□□□□ -2.07
CDC40-204ENST00000431461 POLR1BQ9H9Y6 1135 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 PIH1D3Q9NQM4 214 aaKnown RBP2.1□□□□□ -2.07
CDC40-204ENST00000431461 TMEM30AQ9NV96 361 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 FAM118AQ9NWS6 357 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 ARHGEF38Q9NXL2 777 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 TERF2IPQ9NYB0 399 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 C1RLQ9NZP8 487 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 RCC2Q9P258 522 aaKnown RBP2.1□□□□□ -2.07
CDC40-204ENST00000431461 CPSF2Q9P2I0 782 aaKnown RBP2.1□□□□□ -2.07
CDC40-204ENST00000431461 SLC9A2Q9UBY0 812 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 FBXL17Q9UF56 701 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 CNOT8Q9UFF9 292 aaKnown RBP2.1□□□□□ -2.07
CDC40-204ENST00000431461 CHORDC1Q9UHD1 332 aaPredicted RBP2.1□□□□□ -2.07
CDC40-204ENST00000431461 DDX25Q9UHL0 483 aaKnown RBP2.1□□□□□ -2.07
CDC40-204ENST00000431461 R3HDM2Q9Y2K5 976 aaKnown RBP2.1□□□□□ -2.07
CDC40-204ENST00000431461 ZNF541Q9H0D2 1346 aa2.1□□□□□ -2.07
CDC40-204ENST00000431461 RSF1Q96T23 1441 aaPredicted RBP2.09□□□□□ -2.07
CDC40-204ENST00000431461 TP53BP1Q12888 1972 aaPredicted RBP2.09□□□□□ -2.07
CDC40-204ENST00000431461 SAA2-SAA4A0A096LPE2 208 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 hCG_1807616A0A1W2PRN6 198 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 TCRBV21S2A2A0A5A6 115 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 A6NL46 340 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 FAM90A26D6RGX4 464 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 J3KR12 359 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 CTDSP2O14595 271 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 CLGNO14967 610 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 ANKRD28O15084 1053 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 WDR1O75083 606 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 CLDN14O95500 239 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 LDLRP01130 860 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms