RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 TRBV23OR9-2A0A075B6M9 112 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 IGHV1OR21-1A0A087WYE8 117 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 A0A1W2PNU3 283 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-207ENST00000430858 AGAP14A8MT82 685 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 PLD2O14939 933 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 RRP8O43159 456 aaKnown RBP9.67□□□□□ -0.86
HDAC6-207ENST00000430858 GPR39O43194 453 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 LDB2O43679 373 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 GAS8O95995 478 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 IFNB1P01574 187 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 MSH3P20585 1137 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 CD1CP29017 333 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 EIF2S3P41091 472 aaKnown RBP9.67□□□□□ -0.86
HDAC6-207ENST00000430858 XIAPP98170 497 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 NFATC2Q13469 925 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 SNX1Q13596 522 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 SIX1Q15475 284 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-207ENST00000430858 LONRF2Q1L5Z9 754 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 PLA2G4EQ3MJ16 856 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 AMZ1Q400G9 498 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 ABRAXAS1Q6UWZ7 409 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 WASH2PQ6VEQ5 465 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 LRRC69Q6ZNQ3 347 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 RAB11FIP2Q7L804 512 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 C11orf96Q7Z7L8 435 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 SLITRK4Q8IW52 837 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 FBXO39Q8N4B4 442 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 CCDC89Q8N998 374 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 RASGEF1AQ8N9B8 481 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 OR13C4Q8NGS5 318 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 OR10G6Q8NH81 332 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 ANP32BQ92688 251 aaKnown RBP9.67□□□□□ -0.86
HDAC6-207ENST00000430858 ULK4Q96C45 1275 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 PRR11Q96HE9 360 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-207ENST00000430858 ZNF514Q96K75 400 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-207ENST00000430858 CMKLR1Q99788 373 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-207ENST00000430858 OSGEPL1Q9H4B0 414 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 ASB8Q9H765 288 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 RDH14Q9HBH5 336 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 ETNK1Q9HBU6 452 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 EPB41L5Q9HCM4 733 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 ASCL3Q9NQ33 180 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 WASH6PQ9NQA3 447 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 PRDM8Q9NQV8 689 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 HOMER3Q9NSC5 361 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 AKAP7Q9P0M2 348 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-207ENST00000430858 PAK5Q9P286 719 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 SLC23A2Q9UGH3 650 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 FKBPLQ9UIM3 349 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 DNAJC16Q9Y2G8 782 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 KCTD3Q9Y597 815 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 DNMT3AQ9Y6K1 912 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-207ENST00000430858 FRYQ5TBA9 3013 aa9.67□□□□□ -0.86
HDAC6-207ENST00000430858 IGF2RP11717 2491 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 MYLKQ15746 1914 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 CACNA1BQ00975 2339 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 KLHL33A6NCF5 533 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 PRR19A6NJB7 356 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 PDZK1P1A8MUH7 402 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 E7EVH7 732 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 H7C0S8 307 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 HGSO14964 777 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-207ENST00000430858 CEP104O60308 925 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 SUN1O94901 812 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 FGGP02679 453 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 ITGA2BP08514 1039 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 RALBP11234 206 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 TPH1P17752 444 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 XRCC1P18887 633 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-207ENST00000430858 ITGALP20701 1170 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 IDSP22304 550 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 AKT1P31749 480 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 CA5AP35218 305 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 LMAN1P49257 510 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 EPHA4P54764 986 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 PCBP4P57723 403 aaKnown RBP9.66□□□□□ -0.86
HDAC6-207ENST00000430858 UBE2IP63279 158 aaKnown RBP9.66□□□□□ -0.86
HDAC6-207ENST00000430858 DMPKQ09013 629 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 CDH17Q12864 832 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 SEMA5AQ13591 1074 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 TRA2AQ13595 282 aaKnown RBP eCLIP9.66□□□□□ -0.86
HDAC6-207ENST00000430858 PHF19Q5T6S3 580 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 AGAP9Q5VTM2 703 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 FOXR1Q6PIV2 292 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 C4orf22Q6V702 233 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 USP53Q70EK8 1073 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 TMPRSS9Q7Z410 1059 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 SNX20Q7Z614 316 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 AMZ2Q86W34 360 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 TAB3Q8N5C8 712 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-207ENST00000430858 DNAAF3Q8N9W5 541 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 ZNF248Q8NDW4 579 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 OR4D9Q8NGE8 314 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 STYXQ8WUJ0 223 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 HEXDCQ8WVB3 486 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 DCUN1D1Q96GG9 259 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 AHCYL2Q96HN2 611 aaKnown RBP9.66□□□□□ -0.86
HDAC6-207ENST00000430858 DNAJC1Q96KC8 554 aaKnown RBP9.66□□□□□ -0.86
HDAC6-207ENST00000430858 DCBLD2Q96PD2 775 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms