RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 UBA2Q9UBT2 640 aaPredicted RBP4.15□□□□□ -1.75
HMGB3-203ENST00000430118 FBXO4Q9UKT5 387 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 PADI1Q9ULC6 663 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 MAU2Q9Y6X3 613 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 ZNF521Q96K83 1311 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 LRRC37A2A6NM11 1700 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 PIEZO1Q92508 2521 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 TRBV5-7A0A0A0MS05 114 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 A0A0U1RQF3 1178 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 FAM237AA0A1B0GTK4 181 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 CXorf65A6NEN9 183 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 SLC15A5A6NIM6 579 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 LRRC72A6NJI9 287 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 KRTAP9-7A8MTY7 169 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 C19orf81C9J6K1 198 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 SNAP23O00161 211 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 AVILO75366 819 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 ASNSP08243 561 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 UNGP13051 313 aaPredicted RBP4.14□□□□□ -1.75
HMGB3-203ENST00000430118 ST6GAL1P15907 406 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 BMP5P22003 454 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 CHATP28329 748 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 THPOP40225 353 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 GTF2A1P52655 376 aaPredicted RBP4.14□□□□□ -1.75
HMGB3-203ENST00000430118 CACNA2D1P54289 1103 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 CLDN2P57739 230 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 SIM1P81133 766 aaPredicted RBP4.14□□□□□ -1.75
HMGB3-203ENST00000430118 FOXI1Q12951 378 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 SPP2Q13103 211 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 KLF10Q13118 480 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 SNTB1Q13884 538 aaKnown RBP4.14□□□□□ -1.75
HMGB3-203ENST00000430118 COG2Q14746 738 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 SYCP1Q15431 976 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 NAB2Q15742 525 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 RARS2Q5T160 578 aaKnown RBP4.14□□□□□ -1.75
HMGB3-203ENST00000430118 SUMO4Q6EEV6 95 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 SERPINA11Q86U17 422 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 TSPAN33Q86UF1 283 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 KBTBD6Q86V97 674 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 DZIP1Q86YF9 867 aaKnown RBP4.14□□□□□ -1.75
HMGB3-203ENST00000430118 DHX40Q8IX18 779 aaKnown RBP4.14□□□□□ -1.75
HMGB3-203ENST00000430118 CADM3Q8N126 398 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 ARL14EPQ8N8R7 260 aaPredicted RBP4.14□□□□□ -1.75
HMGB3-203ENST00000430118 APPL2Q8NEU8 664 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 TRPC4APQ8TEL6 797 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 NSMCE1Q8WV22 266 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 FAM162AQ96A26 154 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 FBXL8Q96CD0 374 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 RMDN1Q96DB5 314 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 TMCO6Q96DC7 493 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 RITA1Q96K30 269 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 FAM84BQ96KN1 310 aaPredicted RBP4.14□□□□□ -1.75
HMGB3-203ENST00000430118 HARBI1Q96MB7 349 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 DGAT2Q96PD7 388 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 FAM110AQ9BQ89 295 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 TMEM47Q9BQJ4 181 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 TM2D2Q9BX73 214 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 IDI2Q9BXS1 227 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 PANK2Q9BZ23 570 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 PLK3Q9H4B4 646 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 PFDN4Q9NQP4 134 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 PAPOLBQ9NRJ5 636 aaKnown RBP4.14□□□□□ -1.75
HMGB3-203ENST00000430118 ABCF3Q9NUQ8 709 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 SELENONQ9NZV5 590 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 CWC15Q9P013 229 aaKnown RBP4.14□□□□□ -1.75
HMGB3-203ENST00000430118 COPG2Q9UBF2 871 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 SEL1LQ9UBV2 794 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 AMACRQ9UHK6 382 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 RASAL2Q9UJF2 1139 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 OSGIN1Q9UJX0 560 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 ST3GAL5Q9UNP4 418 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 CMAHPQ9Y471 501 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 TRPV2Q9Y5S1 764 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 SLC4A4Q9Y6R1 1079 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 PTPRFP10586 1907 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 AK9Q5TCS8 1911 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 ROBO3Q96MS0 1386 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 CACNA1AO00555 2505 aa4.14□□□□□ -1.75
HMGB3-203ENST00000430118 A0A0A0MQY5 61 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 TRBC2A0A5B9 178 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 DPPA5A6NC42 116 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 FOXO6A8MYZ6 492 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 H0Y626 953 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 PSMA7O14818 248 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 TPPPO94811 219 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 GGPS1O95749 300 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 TIMP1P01033 207 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 WNT1P04628 370 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 HIST1H2ABP04908 130 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 HOXC6P09630 235 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 CYBAP13498 195 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 TRIM21P19474 475 aaKnown RBP4.13□□□□□ -1.75
HMGB3-203ENST00000430118 HIST1H2ADP20671 130 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 AGAP20933 346 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 MUTP22033 750 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 ATP5DP30049 168 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 SLC16A2P36021 539 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 TDO2P48775 406 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 PPP5CP53041 499 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 RAD23BP54727 409 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms