RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 SLC1A1P43005 524 aa14.67□□□□□ -0.06
MSH5-208ENST00000429846 PCSK7Q16549 785 aa14.67□□□□□ -0.06
MSH5-208ENST00000429846 TEX44Q53QW1 395 aa14.67□□□□□ -0.06
MSH5-208ENST00000429846 CYB5D1Q6P9G0 228 aa14.67□□□□□ -0.06
MSH5-208ENST00000429846 WASH2PQ6VEQ5 465 aa14.67□□□□□ -0.06
MSH5-208ENST00000429846 BZW1Q7L1Q6 419 aaKnown RBP14.67□□□□□ -0.06
MSH5-208ENST00000429846 TIPARPQ7Z3E1 657 aaKnown RBP14.67□□□□□ -0.06
MSH5-208ENST00000429846 STARD8Q92502 1023 aa14.67□□□□□ -0.06
MSH5-208ENST00000429846 CEP41Q9BYV8 373 aa14.67□□□□□ -0.06
MSH5-208ENST00000429846 ZNF768Q9H5H4 540 aaKnown RBP14.67□□□□□ -0.06
MSH5-208ENST00000429846 ARFGAP3Q9NP61 516 aa14.67□□□□□ -0.06
MSH5-208ENST00000429846 WASH6PQ9NQA3 447 aa14.67□□□□□ -0.06
MSH5-208ENST00000429846 DDX56Q9NY93 547 aaKnown RBP14.67□□□□□ -0.06
MSH5-208ENST00000429846 BSNQ9UPA5 3926 aa14.67□□□□□ -0.06
MSH5-208ENST00000429846 PTPN13Q12923 2485 aa14.66□□□□□ -0.06
MSH5-208ENST00000429846 PDZK1P1A8MUH7 402 aa14.66□□□□□ -0.06
MSH5-208ENST00000429846 CBFA2T2O43439 604 aa14.66□□□□□ -0.06
MSH5-208ENST00000429846 CDK14O94921 469 aa14.66□□□□□ -0.06
MSH5-208ENST00000429846 TPM1P09493 284 aa14.66□□□□□ -0.06
MSH5-208ENST00000429846 PIRTP0C851 137 aa14.66□□□□□ -0.06
MSH5-208ENST00000429846 BPIP17213 487 aa14.66□□□□□ -0.06
MSH5-208ENST00000429846 AMD1P17707 334 aa14.66□□□□□ -0.06
MSH5-208ENST00000429846 IDSP22304 550 aa14.66□□□□□ -0.06
MSH5-208ENST00000429846 HMGCLP35914 325 aa14.66□□□□□ -0.06
MSH5-208ENST00000429846 SLC19A1P41440 591 aa14.66□□□□□ -0.06
MSH5-208ENST00000429846 CAPZBP47756 277 aa14.66□□□□□ -0.06
MSH5-208ENST00000429846 NR2C2P49116 596 aa14.66□□□□□ -0.06
MSH5-208ENST00000429846 GFERP55789 205 aa14.66□□□□□ -0.06
MSH5-208ENST00000429846 TLE1Q04724 770 aa14.66□□□□□ -0.06
MSH5-208ENST00000429846 IL11RAQ14626 422 aa14.66□□□□□ -0.06
MSH5-208ENST00000429846 PLA2G4EQ3MJ16 856 aa14.66□□□□□ -0.06
MSH5-208ENST00000429846 ZNF648Q5T619 568 aaPredicted RBP14.66□□□□□ -0.06
MSH5-208ENST00000429846 AGAP9Q5VTM2 703 aa14.66□□□□□ -0.06
MSH5-208ENST00000429846 ZDHHC20Q5W0Z9 365 aa14.66□□□□□ -0.06
MSH5-208ENST00000429846 ABRAXAS1Q6UWZ7 409 aa14.66□□□□□ -0.06
MSH5-208ENST00000429846 RFX6Q8HWS3 928 aa14.66□□□□□ -0.06
MSH5-208ENST00000429846 DTX3LQ8TDB6 740 aa14.66□□□□□ -0.06
MSH5-208ENST00000429846 APOBEC4Q8WW27 367 aaKnown RBP14.66□□□□□ -0.06
MSH5-208ENST00000429846 ULBP3Q9BZM4 244 aa14.66□□□□□ -0.06
MSH5-208ENST00000429846 TRABDQ9H4I3 376 aa14.66□□□□□ -0.06
MSH5-208ENST00000429846 GLOD4Q9HC38 313 aa14.66□□□□□ -0.06
MSH5-208ENST00000429846 OGFRQ9NZT2 677 aa14.66□□□□□ -0.06
MSH5-208ENST00000429846 SCHIP1Q9P0W5 487 aaPredicted RBP14.66□□□□□ -0.06
MSH5-208ENST00000429846 SLC23A2Q9UGH3 650 aa14.66□□□□□ -0.06
MSH5-208ENST00000429846 ANAPC2Q9UJX6 822 aa14.66□□□□□ -0.06
MSH5-208ENST00000429846 HECTD1Q9ULT8 2610 aa14.66□□□□□ -0.06
MSH5-208ENST00000429846 NKX2-8O15522 239 aa14.65□□□□□ -0.06
MSH5-208ENST00000429846 MTSS1O43312 755 aa14.65□□□□□ -0.06
MSH5-208ENST00000429846 KCNJ13O60928 360 aa14.65□□□□□ -0.06
MSH5-208ENST00000429846 MT-CYBP00156 380 aaPredicted RBP14.65□□□□□ -0.06
MSH5-208ENST00000429846 PRKAR1AP10644 381 aa14.65□□□□□ -0.06
MSH5-208ENST00000429846 TNNT3P45378 269 aaPredicted RBP14.65□□□□□ -0.06
MSH5-208ENST00000429846 FOXM1Q08050 763 aa14.65□□□□□ -0.06
MSH5-208ENST00000429846 GTF2H3Q13889 308 aa14.65□□□□□ -0.06
MSH5-208ENST00000429846 SEPT6Q14141 434 aa14.65□□□□□ -0.06
MSH5-208ENST00000429846 NPNTQ6UXI9 565 aa14.65□□□□□ -0.06
MSH5-208ENST00000429846 PRSS42Q7Z5A4 293 aa14.65□□□□□ -0.06
MSH5-208ENST00000429846 ZNF547Q8IVP9 402 aa14.65□□□□□ -0.06
MSH5-208ENST00000429846 RHOT1Q8IXI2 618 aa14.65□□□□□ -0.06
MSH5-208ENST00000429846 SPATA22Q8NHS9 363 aa14.65□□□□□ -0.06
MSH5-208ENST00000429846 C9orf43Q8TAL5 461 aaPredicted RBP14.65□□□□□ -0.06
MSH5-208ENST00000429846 BRSK1Q8TDC3 778 aa14.65□□□□□ -0.06
MSH5-208ENST00000429846 TEKT5Q96M29 485 aa14.65□□□□□ -0.06
MSH5-208ENST00000429846 CCDC42Q96M95 316 aa14.65□□□□□ -0.06
MSH5-208ENST00000429846 ZCCHC2Q9C0B9 1178 aaKnown RBP14.65□□□□□ -0.06
MSH5-208ENST00000429846 RAB33BQ9H082 229 aa14.65□□□□□ -0.06
MSH5-208ENST00000429846 SLC40A1Q9NP59 571 aa14.65□□□□□ -0.06
MSH5-208ENST00000429846 ABHD10Q9NUJ1 306 aa14.65□□□□□ -0.06
MSH5-208ENST00000429846 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.65□□□□□ -0.06
MSH5-208ENST00000429846 ZNF624Q9P2J8 865 aaPredicted RBP14.65□□□□□ -0.06
MSH5-208ENST00000429846 DNAJC16Q9Y2G8 782 aa14.65□□□□□ -0.06
MSH5-208ENST00000429846 RPS6KL1Q9Y6S9 549 aa14.65□□□□□ -0.06
MSH5-208ENST00000429846 MAST4O15021 2626 aa14.64□□□□□ -0.07
MSH5-208ENST00000429846 GOLGA6L3A6NEY3 463 aa14.64□□□□□ -0.07
MSH5-208ENST00000429846 MTX2O75431 263 aa14.64□□□□□ -0.07
MSH5-208ENST00000429846 EPOP01588 193 aa14.64□□□□□ -0.07
MSH5-208ENST00000429846 BRAFP15056 766 aa14.64□□□□□ -0.07
MSH5-208ENST00000429846 TYRP1P17643 537 aa14.64□□□□□ -0.07
MSH5-208ENST00000429846 TCN2P20062 427 aa14.64□□□□□ -0.07
MSH5-208ENST00000429846 PTPN3P26045 913 aa14.64□□□□□ -0.07
MSH5-208ENST00000429846 OAS2P29728 719 aaKnown RBP14.64□□□□□ -0.07
MSH5-208ENST00000429846 CASRP41180 1078 aa14.64□□□□□ -0.07
MSH5-208ENST00000429846 HALP42357 657 aa14.64□□□□□ -0.07
MSH5-208ENST00000429846 DYNLT1P63172 113 aa14.64□□□□□ -0.07
MSH5-208ENST00000429846 PRKD1Q15139 912 aaPredicted RBP14.64□□□□□ -0.07
MSH5-208ENST00000429846 SEPT7Q16181 437 aaKnown RBP14.64□□□□□ -0.07
MSH5-208ENST00000429846 C11orf96Q7Z7L8 435 aa14.64□□□□□ -0.07
MSH5-208ENST00000429846 TRAPPC5Q8IUR0 188 aa14.64□□□□□ -0.07
MSH5-208ENST00000429846 UNC5BQ8IZJ1 945 aa14.64□□□□□ -0.07
MSH5-208ENST00000429846 RNF25Q96BH1 459 aaPredicted RBP14.64□□□□□ -0.07
MSH5-208ENST00000429846 CXorf40BQ96DE9 158 aa14.64□□□□□ -0.07
MSH5-208ENST00000429846 ZDHHC12Q96GR4 267 aa14.64□□□□□ -0.07
MSH5-208ENST00000429846 TTC25Q96NG3 672 aa14.64□□□□□ -0.07
MSH5-208ENST00000429846 TGM7Q96PF1 710 aa14.64□□□□□ -0.07
MSH5-208ENST00000429846 HACD3Q9P035 362 aa14.64□□□□□ -0.07
MSH5-208ENST00000429846 EPHA6Q9UF33 1036 aa14.64□□□□□ -0.07
MSH5-208ENST00000429846 FAM153AQ9UHL3 310 aa14.64□□□□□ -0.07
MSH5-208ENST00000429846 INTUQ9ULD6 942 aa14.64□□□□□ -0.07
MSH5-208ENST00000429846 PCDHB3Q9Y5E6 796 aa14.64□□□□□ -0.07
MSH5-208ENST00000429846 SLC30A1Q9Y6M5 507 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms